Os01g0649400

From RiceWiki
Revision as of 18:55, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0649400

Description

Lipolytic enzyme, G-D-S-L family protein

Version

NM_001185554.1 GI:297720242 GeneID:9266391

Length

3702 bp

Definition

Oryza sativa Japonica Group Os01g0649400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27959061..27962762

Sequence Coding Region

27959061..27959274,27961625..27961773,27961874..27962150,27962482..27962762

Expression

GEO Profiles:Os01g0649400

Genome Context

<gbrowseImage1> name=NC_008394:27959061..27962762 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:27959061..27962762 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggctgccgttcctgcggccgtactggggagggcagaccgcggaggacttcgccagcggggccaacttcgcggtgggcggcgccacggcgctcggcccggacttcttccgggagagaggggtgcccacggacgacggtgtcgtgcacctcgagatggagatggggtggttccgcgatctgctcgacatgctctgcgccggcgacatggacggttgcaagggcatgatgaatcaatctctctttttggtcggagaaatcggaggcaatgattacaactatcctcttatgagcggcgtgcccattgaaaagattcgcagcttcactcctagtgttattgccaaaatttcttctacaatcaccgaattgatcggacttggagccaagacactagttgttcctggtaacctcccaattggatgtattccaacatacctcatgcaatttgagagtgataagaaggaagattatgagccagagataggttgtcttaggtggatgaatgagttctcgcaataccacaacaaacttcttatagatgaattggaaaacttgcgcaagcttcaccccgatgtggccatcatctatactgattactatggagctgccatggaaatttttctttcccctgaacaatttggaattgaggatcctttggtcgcttgctgtggtggaggaggaccttatggtgtatctgcatctgcaggctgtggatatggtgaatacaaagtgtgtgatgacccatcaaagtatgcatcgtgggatggctttcatccatcagaagctgcatacaagggcattgcaattggcctgctacagggcccatacactcaacctccaatcgctagcatcaccgattcttgtctacagatcattggcctcggttcttctgctgaacgcaaggtcatctatgacatgtag</cdnaseq>

Protein Sequence

<aaseq>MGLPFLRPYWGGQTAEDFASGANFAVGGATALGPDFFRERGVPT DDGVVHLEMEMGWFRDLLDMLCAGDMDGCKGMMNQSLFLVGEIGGNDYNYPLMSGVPI EKIRSFTPSVIAKISSTITELIGLGAKTLVVPGNLPIGCIPTYLMQFESDKKEDYEPE IGCLRWMNEFSQYHNKLLIDELENLRKLHPDVAIIYTDYYGAAMEIFLSPEQFGIEDP LVACCGGGGPYGVSASAGCGYGEYKVCDDPSKYASWDGFHPSEAAYKGIAIGLLQGPY TQPPIASITDSCLQIIGLGSSAERKVIYDM</aaseq>

Gene Sequence

<dnaseqindica>1..214#2565..2713#2814..3090#3422..3702#atggggctgccgttcctgcggccgtactggggagggcagaccgcggaggacttcgccagcggggccaacttcgcggtgggcggcgccacggcgctcggcccggacttcttccgggagagaggggtgcccacggacgacggtgtcgtgcacctcgagatggagatggggtggttccgcgatctgctcgacatgctctgcgccggcgacatggacggtatgtttgaatcaaccaacacctttcggctttcggctttcggctttcgccttgcaccaccaacctttgaggcttcgacaatgacgtttggaacgagatcgtggcagttctcattttctaagcactagtcatagcagtttgctattagttggtggggctttattgtctagaaaggtgcgtgtctagagataccacaatcattaacaatatctatctatctatctatctatctatctatctattatctatctacctattatattattaaaggattagaaaaaggagcctccacgttcgctctcatggcttagaaattctcgcattaatcggagaaaaagaaaaaaacaaagtccatatagaaatacaatttagaaatagttgaaattcggaattaaaaaataaggaatattagaagaggagactagagtacatatagaaatacaattagaaaataactgaaattctgaattaaaaataaggaatattagaagtagagtatagagtccatatagaaatacaattaggaaataatagaaattcagaattaaaaataaggaatattagaagtagagtatagagtccatatggaaaatcagagtccatattagaaatacaatttagaaatagttgaaattcgaaattaaaaaataaagaatattagaagaggagactagagtccatatagaaatacaattagaaaataactgaaattcggaataaaaaaaaggaatattagaagtagagtatagagtacatatagaaatacaattaggaaataatagaaattcggaattaaaaataaggaatattagaagtagagtatagagtccatatagaaatacaattaagaaaaaaaattcagaattaaaaaataaggaatgttagaagtagagaatagagtccatataggaatttaaaactaactaaaattcagaataaacataataaaattaaaagtagagtttagagtccgtataaaaatacaatttctaaataactaaaattcaaaattaagaaaaatatgggaagaagagtttaaattaatataggaatacaatttagaagtaactgaaatttgaaattaaaattaaagaatactgaaagatgaatttatatagaaatacaatttagaaatagctgaaattcggaattaaaaaataaggaataatagaagaggagactagagtccatatagaaatacaatttagaaatagttgaaattcggaattaaaaaaataaggaatattagaagagtagactagaatccatataaaaatacaattaggaaataactgaaatttggaattaaaaataaggaatattagaagtagagtatagagtccatacggaaatacaattagaaaataatagaaacttggaattaaaaaataaggaatattagaagtagagtatagagtccatatagaaatacaattaagaaaaaaaaaatagaaattaggaattaaaaataaggaatattagaagtagagtatagagtccatataggaatttaaaactaactaaaatttagaataaacataataaaatgaaaagtagtgtgtagagtccgtataaaaatacaatttacaaataactaaaattagaaattaagaaaaacatgggaagaagagtttaaagtcaatataggaatacaatttagaagtaactgaaatttgaaattaaaaattaaagaattttgaaagatgaatttagaatccacatagaaatacaattaaaaataataaaagttcagaattaaaaaaatatattaaaagacaagtccagagtccatataggaatatatataatttacaaataactaaagtttgatattaaaaataattaataactaacacgtatataaaatacaatataaatattacgcatgagtagtttcgtaaagttattgtaaaatttaaaattatattgtcattgtaatatattttaataatatagtgagaaaatatatatgctattatataagagaaaatataatggtactagccgcgtaatctgcgcgagccaccatgctagtttggagtatactactactgctactatacaataatgcacaccatgccactgccaaatatttggtcaacatgatatgatttccacgtgaataattgcttaacccttgaattggttgcatagaataaaataaaaaaaataaatatgccaggtcaatgattgtgggtttgctacaaatctgtctagtttataataggataataaacgaacatgctagaagtagtaggtgaagatagtttagtttaactaccatataaagcagcaattttgatagttaaagttccctttcagctattactaaacgatgtttatggcacaggttgcaagggcatgatgaatcaatctctctttttggtcggagaaatcggaggcaatgattacaactatcctcttatgagcggcgtgcccattgaaaagattcgcagcttcactcctagtgttattgccaaaatttcttctacaatcaccgtgagtaatgtgcctgcatctttttatataccttgagctcctgtttcacgaagcaatataatattatatagcttgtaatgcaataaagttgagttcgcaggaattgatcggacttggagccaagacactagttgttcctggtaacctcccaattggatgtattccaacatacctcatgcaatttgagagtgataagaaggaagattatgagccagagataggttgtcttaggtggatgaatgagttctcgcaataccacaacaaacttcttatagatgaattggaaaacttgcgcaagcttcaccccgatgtggccatcatctatactgattactatggagctgccatggaaatttttctttcccctgaacaatttggtgagtgcagctagttcattactgtttgtaagctttatactattaattaattctagtttgtaggttactacaagaaataaaatactagctttctgttgacctgttaaattcgacttccatagcatttcttgaacaaaggaaatctttctgtaaatatgcttgtaccacaatcataacatctaattagggtttctctccctccatatatttaccaggttggctattctattttcatcatgtcatggaatgcactcctcaactactttctacattgataaagaacattttttcttgttggtagcttgtttaacactcccaaactgcgattcaggaattgaggatcctttggtcgcttgctgtggtggaggaggaccttatggtgtatctgcatctgcaggctgtggatatggtgaatacaaagtgtgtgatgacccatcaaagtatgcatcgtgggatggctttcatccatcagaagctgcatacaagggcattgcaattggcctgctacagggcccatacactcaacctccaatcgctagcatcaccgattcttgtctacagatcattggcctcggttcttctgctgaacgcaaggtcatctatgacatgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0649400, RefSeq:Os01g0649400