Os06g0650600

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Revision as of 09:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0650600| Description = Nonaspanin (TM9SF) family protein| Version = NM_001064757.1 GI:115469245 GeneID:4341685| Length = 2938 bp| Definiti...")
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Gene Name

Os06g0650600

Description

Nonaspanin (TM9SF) family protein

Version

NM_001064757.1 GI:115469245 GeneID:4341685

Length

2938 bp

Definition

Oryza sativa Japonica Group Os06g0650600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27508944..27511881

Sequence Coding Region

27509033..27509149,27509255..27509419,27509498..27509607,27509720..27509834,27509965..27510077
,27510196..27510349,27510457..27511620

Expression

GEO Profiles:Os06g0650600

Genome Context

<gbrowseImage1> name=NC_008399:27508944..27511881 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27508944..27511881 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacccgcgaggtgcccctcctcctcctcctcgtcgtcgtcatggtcctcgccggcgccggcgccgcccgagggttctacctccccggcgtcgccccccgcgacttccgcaagaaggaccagctggcggtgaaggtgaaccagctgagctcgatcaagacgcagctgccctactcctactactccctccccttctgccgcccggccaccatcgtcgacagcgccgagaacctcggcgaggtcctccgcggcgaccgcatcgagaactccctctacgtgttcgagatgagggagccgaggctgtgccagatcgtctgcaaaaccgcgctgacccatcaggaggcgaaggatttcagggagaagatcgacgacgagtaccgcataaacatgattcttgacaaccttcctctggtcgtcccgatcaggagtttgttggatgatcacgacgcgcccacatcttatcagcttggcgtccatgtcggcatcaagggccagtacgccgggagtaatgaggagaagcacttcatctacaaccacttatcgtttctggtgaagtaccacagggatgagaacacggatcttgctaggatcgttgggtttgaggtcaaaccattcagtaccaagcatgaatatgatggcgaatggaaggagaatgagacccggctcaagacctgcgatccgcattcgcgacgcctcgtcgtcgactccgattcgcctcaagaagtagaggccggcaaagagatcatcttcacctatgatgttaactttgaggagagcgatatcaaatgggcgtcgcggtgggacagctacctgctgatgacggatgatcagatccactggttctccatcgtgaactcgctgatgatcgtgctgttcttgtccgggatgctggccatgatcatgctgaggacgctgtaccgggacatctccaagtacaaccagctggagacgcaggaggaggcgcaggaggagaccgggtggaagctggtgcacggcgacgtgttccggccgccggcgcgcgccggcacgctgtgcgtgttcgtcggcaccggggtgcagttcctcgggatgctgctggtgacgctgctgttcgccatcctcggcctcctctcgccatcgaacaggggcggcctcatgacggcgatgctgctggtgtgggcgttcatgggcgtgctcgccggctacgcggcggcgcggctgtacagggggttcagggggtcggagtggaaggcggtggcgatgaggacggcgctggcgttccccggcgccgcgttcgccgtgttcttcgtcctgaacgcgctcatctggggcgagaggtcatccggcgccgtgccgttcaccaccatgaccgcgctggtgctgctctggttcggcatctccgtgccgctggtgttcgtcgggagctacctcgggttcaagcggccggcggcgacggaggactaccccgtgcggacgaacaagatcccgcggccgatacccgagcagccgtggtacatgaacccggcgatgtcggtgctcatcggcgggatcctgcccttcggcgcggtgttcatcgagctcttcttcatcctcacctccatctggctccaccaattctactacatctttggcttcctcttcctcgtcttcgccatcctcgtcgtcacctgcgccgagatcgccgtcgtgctctgctacttccagctctgcagcgaggactacgagtggtggtggaggtcgtacctcaccgccggctcgtcggcgctctacctcttcctctacgccgccttctacttcttcaccaagctcgacatcaccaaggtcgtctccggcgtgctctacttcggctacatgctcatcgcctccgccgccttcttcgtcctcaccggcacaatcggcttctacgcctgcttctggttcaccaggctcatctactcctccgtcaagatcgactag</cdnaseq>

Protein Sequence

<aaseq>MATREVPLLLLLVVVMVLAGAGAARGFYLPGVAPRDFRKKDQLA VKVNQLSSIKTQLPYSYYSLPFCRPATIVDSAENLGEVLRGDRIENSLYVFEMREPRL CQIVCKTALTHQEAKDFREKIDDEYRINMILDNLPLVVPIRSLLDDHDAPTSYQLGVH VGIKGQYAGSNEEKHFIYNHLSFLVKYHRDENTDLARIVGFEVKPFSTKHEYDGEWKE NETRLKTCDPHSRRLVVDSDSPQEVEAGKEIIFTYDVNFEESDIKWASRWDSYLLMTD DQIHWFSIVNSLMIVLFLSGMLAMIMLRTLYRDISKYNQLETQEEAQEETGWKLVHGD VFRPPARAGTLCVFVGTGVQFLGMLLVTLLFAILGLLSPSNRGGLMTAMLLVWAFMGV LAGYAAARLYRGFRGSEWKAVAMRTALAFPGAAFAVFFVLNALIWGERSSGAVPFTTM TALVLLWFGISVPLVFVGSYLGFKRPAATEDYPVRTNKIPRPIPEQPWYMNPAMSVLI GGILPFGAVFIELFFILTSIWLHQFYYIFGFLFLVFAILVVTCAEIAVVLCYFQLCSE DYEWWWRSYLTAGSSALYLFLYAAFYFFTKLDITKVVSGVLYFGYMLIASAAFFVLTG TIGFYACFWFTRLIYSSVKID</aaseq>

Gene Sequence

<dnaseqindica>90..206#312..476#555..664#777..891#1022..1134#1253..1406#1514..2677#cgacttctccctctccctcctcttccactctcctcctcctcctcgtgagctccgaggttgccgacgacgacgacgacgaggtctcacccatggcgacccgcgaggtgcccctcctcctcctcctcgtcgtcgtcatggtcctcgccggcgccggcgccgcccgagggttctacctccccggcgtcgccccccgcgacttccgcaaggtttggctgacgcacctgttgttttcactttcttgattctgattatggccaccggcgacggcggcggcggcggcggcgaggtgaccgtggttagtgtgggtgcagaaggaccagctggcggtgaaggtgaaccagctgagctcgatcaagacgcagctgccctactcctactactccctccccttctgccgcccggccaccatcgtcgacagcgccgagaacctcggcgaggtcctccgcggcgaccgcatcgagaactccctctacgtggtcagtagtacccggttaggttcgctgaattggtgttcgaattgaccgcgaattctgatgaaatcccccgcgtcgcagttcgagatgagggagccgaggctgtgccagatcgtctgcaaaaccgcgctgacccatcaggaggcgaaggatttcagggagaagatcgacgacgagtaccgcataaacatgtgacaatttcttgcttgcactgatgctcgatcacctgtgtcgctgcaattatttatcaagaactcttatgtactatcttgagatctttctactcacccgtgttgcctgcaggattcttgacaaccttcctctggtcgtcccgatcaggagtttgttggatgatcacgacgcgcccacatcttatcagcttggcgtccatgtcggcatcaagggccagtacgccggggtgagctgatctggaaaagaaattctgaataatctgactgctcgatcggtagctaggccgatgcatttgacctatgtgatattcagatcaatttgtcagtgggattcaattggttaattcactgatgcagagtaatgaggagaagcacttcatctacaaccacttatcgtttctggtgaagtaccacagggatgagaacacggatcttgctaggatcgttgggtttgaggtcaaaccattcaggttgtttgtgtgttcttctggatttgtaggaatcagatgatgctcactgacattttttccagctctctgatgatcatactaacatcagtttattatgtacctccgacgatttgcgcagtaccaagcatgaatatgatggcgaatggaaggagaatgagacccggctcaagacctgcgatccgcattcgcgacgcctcgtcgtcgactccgattcgcctcaagaagtagaggccggcaaagagatcatcttcacctatgatgttaactttgaggtaatgtgtcaaatgccaaatcatttcagccaattcagatgcatacggtgtggttagcttggcatttgctgcattgtttgtgtccatggtggatgaatgatatgcaggagagcgatatcaaatgggcgtcgcggtgggacagctacctgctgatgacggatgatcagatccactggttctccatcgtgaactcgctgatgatcgtgctgttcttgtccgggatgctggccatgatcatgctgaggacgctgtaccgggacatctccaagtacaaccagctggagacgcaggaggaggcgcaggaggagaccgggtggaagctggtgcacggcgacgtgttccggccgccggcgcgcgccggcacgctgtgcgtgttcgtcggcaccggggtgcagttcctcgggatgctgctggtgacgctgctgttcgccatcctcggcctcctctcgccatcgaacaggggcggcctcatgacggcgatgctgctggtgtgggcgttcatgggcgtgctcgccggctacgcggcggcgcggctgtacagggggttcagggggtcggagtggaaggcggtggcgatgaggacggcgctggcgttccccggcgccgcgttcgccgtgttcttcgtcctgaacgcgctcatctggggcgagaggtcatccggcgccgtgccgttcaccaccatgaccgcgctggtgctgctctggttcggcatctccgtgccgctggtgttcgtcgggagctacctcgggttcaagcggccggcggcgacggaggactaccccgtgcggacgaacaagatcccgcggccgatacccgagcagccgtggtacatgaacccggcgatgtcggtgctcatcggcgggatcctgcccttcggcgcggtgttcatcgagctcttcttcatcctcacctccatctggctccaccaattctactacatctttggcttcctcttcctcgtcttcgccatcctcgtcgtcacctgcgccgagatcgccgtcgtgctctgctacttccagctctgcagcgaggactacgagtggtggtggaggtcgtacctcaccgccggctcgtcggcgctctacctcttcctctacgccgccttctacttcttcaccaagctcgacatcaccaaggtcgtctccggcgtgctctacttcggctacatgctcatcgcctccgccgccttcttcgtcctcaccggcacaatcggcttctacgcctgcttctggttcaccaggctcatctactcctccgtcaagatcgactagagcttaattacacttgcacttgcatgaatgcagtgtcattaacgtgcttgctcgagatactactagcatgtataagagttaatttgttaatcaggtcatgataaattggtaattaggctgctctcttatccccggatgcttcaggggatctacagtttagtcaagttgtactagtagcttttgatgtgtaatcctatatagttacattaaacaaagttttctgatacaagtgaagatttaaccacaggcatttttcagttg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0650600, RefSeq:Os06g0650600