Os01g0675100

From RiceWiki
Revision as of 18:56, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0675100

Description

contains InterPro domain(s): IPR012335, IPR013740, IPR012336

Version

NM_001050380.1 GI:115439130 GeneID:4325511

Length

2058 bp

Definition

Oryza sativa Japonica Group Os01g0675100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29501676..29503733

Sequence Coding Region

29501860..29502113,29502398..29502477,29503482..29503636

Expression

GEO Profiles:Os01g0675100

Genome Context

<gbrowseImage1> name=NC_008394:29501676..29503733 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:29501676..29503733 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccccggttgccgtgggcgacaccctccccgacggccagctggggtggttcgacggggaggacaagctgcagcaggtctccgtccacggcctcgccgccggcaagaaggtcgtcctcttcggcgtccccggtgccttcaccccgacctgcagcaatcagcatgtgccaggattcataaatcaggctgagcagctcaaagccaagggtgtagacgacatcttgcttgtcagtgttaacgacccctttgtcatgaaggcgtgggcaaagtcataccctgagaataagcatgtgaaattccttgccgatggtttgggaacatacaccaaggcacttggtcttgagcttgacctttcggagaaagggcttggtattcgttcgagacggtttgctctccttgctgacaacctcaaggttactgttgcaaacattgaggaaggtggccaattcacaatctctggtgctgaggagatcctcaaggcactgtaa</cdnaseq>

Protein Sequence

<aaseq>MAPVAVGDTLPDGQLGWFDGEDKLQQVSVHGLAAGKKVVLFGVP GAFTPTCSNQHVPGFINQAEQLKAKGVDDILLVSVNDPFVMKAWAKSYPENKHVKFLA DGLGTYTKALGLELDLSEKGLGIRSRRFALLADNLKVTVANIEEGGQFTISGAEEILK AL</aaseq>

Gene Sequence

<dnaseqindica>1621..1874#1257..1336#98..252#atctcccttccctgtcgattaccttctctccttcctctgttcctcctctcctccacacatccaggcaggcaacacaagaatcatccgggagagcgacatggccccggttgccgtgggcgacaccctccccgacggccagctggggtggttcgacggggaggacaagctgcagcaggtctccgtccacggcctcgccgccggcaagaaggtcgtcctcttcggcgtccccggtgccttcaccccgacctgcaggtctcttcctccttttttcgatttcctctcccccctctttcttggagacgttatatttccctgaaaaaaaaattccttaaaaaatgggacttctttttatcagatcgagaaattttactgcaaaactgaaatgtgtactagctgatgtccggaccaaatccaagattactgctttattatacagatactcacaatttatgggattgatttgacgagctctgaagtcactcccacttccttgggtgtcagagttagggttaaaaatcttgatgtgggtttatatattgctagttgcatgactaaaaagtagacttcgatccactgttctggtttactccatgtgttgttccccagcttctgagcacgcgagagaaaatgttataatttttgggcatctatgctagaagcagttaagccaagatgggtggcaggatataaaagggagattttggctatagttactccgtggagattcgctcagaatttcgtaagctgatagccttttcttgttgattaatctcccacagaaaatctgtaaacctggatgcagctaactgaactaaaacaaacatttcgaatagaaaaaatggagacacgagtcacatgactgacaaatacagagtacacattttatcgagagcaaagtgctcatatccaagtgctcctaactggctaacttttgtcttcattctttagattagactgatgctgttggtttttacttgtactatttggtttcgataaatttgtgagcttgaaatgttttatccttccctttgccatcatcctctgttggcacttggcaccgcagttttaatatatctagctgccaattatctcattttgctgtcccttttataagaacccgctgttctattttgccatcacagaggtttaagttgtcatattactttgttactcgccctgttattgtcttcttttcacttctgaaaacctgatgaactgacataatgtcttttattattatttttcgatggctatagcaatcagcatgtgccaggattcataaatcaggctgagcagctcaaagccaagggtgtagacgacatcttgcttgtcagtggtatgtttctgtcatttgtttctccatgttcatattcccaaatttagcttttgtcagaaatcttcagtcaattatttgaactaaacatggaaggacaaaggaaaattttattctatttcagatattgtgattttcccgtgttctcggtaaagttgtgtagggtagatatactgactggtgtacaaagtagaaacactatccactttctgactgtatatagtaccgaatcaaggcagctgtggcagaatatgacttatctgtggatctatgatataattttgcagttaacgacccctttgtcatgaaggcgtgggcaaagtcataccctgagaataagcatgtgaaattccttgccgatggtttgggaacatacaccaaggcacttggtcttgagcttgacctttcggagaaagggcttggtattcgttcgagacggtttgctctccttgctgacaacctcaaggttactgttgcaaacattgaggaaggtggccaattcacaatctctggtgctgaggagatcctcaaggcactgtaagagcttcagctcttaggaacggcagcgatcacttggacctatcgtgtcaatcttgtttaaatttgtctgcaaaatacttgtgcgaataaaattgtcgatgagctgcctagttgtgaggactttatgataatgtttgaatctgtatccactgttgaatcaagtagtaatgttcagtgctcatgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0675100, RefSeq:Os01g0675100