Os06g0652300

From RiceWiki
Revision as of 09:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0652300| Description = Similar to GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase (GER1)| Version = NM_001064769.1 GI:115469269 Gene...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0652300

Description

Similar to GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase (GER1)

Version

NM_001064769.1 GI:115469269 GeneID:4341698

Length

1044 bp

Definition

Oryza sativa Japonica Group Os06g0652300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27575965..27577008

Sequence Coding Region

27575965..27577008

Expression

GEO Profiles:Os06g0652300

Genome Context

<gbrowseImage1> name=NC_008399:27575965..27577008 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27575965..27577008 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccttctcagcagcgcagcagcagtggtagcactgcgaaggccggggacgccgatggcgacggcgacgccgccgccgtatccttcctcggcgacaagtcggcgaaggtcttcatcgccggccaccgcggcatggtcggctcggcggtgcaccgcaagctggacgcgctggggttcaccaacgtcgtggtcaggactcgcgccgagctcgacctggcgtgccaggccgccgtggaggcgttcttcgccgccgagctgccgcggtacgtgatcctggcggcggcgaaggtcggcggcgtccacgcgagctccgccgcgccggcggagtacctgacggagaacctccgcatcaccgtcaacgtcgtcgacgccgcccgccgctgcggctccgtccgcaagctgctcgtcctcgccagctcgaccatctacccggcggacgcgccgcagccgacgccggagtcggccctcctcaccggcccgccggcggaggggagcgagtggtacgccatcccgaagatcgccgggatcaagatgtgccaggcggtacgcgccgagtacggcttggacgccatcgcggcggcgccgaacaacctgtacgggccgcgccacccgttcccgccggaacactcccacgtcatcccggcgctgatccggcggttccaccgcgcgaagctcgagggcgccggcgaggtggcggtgtggggcagcggcgcggcggcgcgggagttcacccacgtggacgacctcgcggaggcggtggtggtgctgatggagaggtactccggggaggagcacgtgaacgtggggagcggggaggaggtgacggtgagggagctcgcggaggcggtgaggggggtggtcgggtacgagggggtggtggcgtgggacgcggcgcggccggagggggtggcgcggcgggtggtggacagcgggaggatgaggaagctggggtgggagccgagggtggcgctgcgcgacggcatccaggacctctaccgcttctacctgcgtcacgagtgcggcggccaagctcatcatgcatag</cdnaseq>

Protein Sequence

<aaseq>MPSQQRSSSGSTAKAGDADGDGDAAAVSFLGDKSAKVFIAGHRG MVGSAVHRKLDALGFTNVVVRTRAELDLACQAAVEAFFAAELPRYVILAAAKVGGVHA SSAAPAEYLTENLRITVNVVDAARRCGSVRKLLVLASSTIYPADAPQPTPESALLTGP PAEGSEWYAIPKIAGIKMCQAVRAEYGLDAIAAAPNNLYGPRHPFPPEHSHVIPALIR RFHRAKLEGAGEVAVWGSGAAAREFTHVDDLAEAVVVLMERYSGEEHVNVGSGEEVTV RELAEAVRGVVGYEGVVAWDAARPEGVARRVVDSGRMRKLGWEPRVALRDGIQDLYRF YLRHECGGQAHHA</aaseq>

Gene Sequence

<dnaseqindica>1..1044#atgccttctcagcagcgcagcagcagtggtagcactgcgaaggccggggacgccgatggcgacggcgacgccgccgccgtatccttcctcggcgacaagtcggcgaaggtcttcatcgccggccaccgcggcatggtcggctcggcggtgcaccgcaagctggacgcgctggggttcaccaacgtcgtggtcaggactcgcgccgagctcgacctggcgtgccaggccgccgtggaggcgttcttcgccgccgagctgccgcggtacgtgatcctggcggcggcgaaggtcggcggcgtccacgcgagctccgccgcgccggcggagtacctgacggagaacctccgcatcaccgtcaacgtcgtcgacgccgcccgccgctgcggctccgtccgcaagctgctcgtcctcgccagctcgaccatctacccggcggacgcgccgcagccgacgccggagtcggccctcctcaccggcccgccggcggaggggagcgagtggtacgccatcccgaagatcgccgggatcaagatgtgccaggcggtacgcgccgagtacggcttggacgccatcgcggcggcgccgaacaacctgtacgggccgcgccacccgttcccgccggaacactcccacgtcatcccggcgctgatccggcggttccaccgcgcgaagctcgagggcgccggcgaggtggcggtgtggggcagcggcgcggcggcgcgggagttcacccacgtggacgacctcgcggaggcggtggtggtgctgatggagaggtactccggggaggagcacgtgaacgtggggagcggggaggaggtgacggtgagggagctcgcggaggcggtgaggggggtggtcgggtacgagggggtggtggcgtgggacgcggcgcggccggagggggtggcgcggcgggtggtggacagcgggaggatgaggaagctggggtgggagccgagggtggcgctgcgcgacggcatccaggacctctaccgcttctacctgcgtcacgagtgcggcggccaagctcatcatgcatag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0652300, RefSeq:Os06g0652300