Os09g0516500

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Revision as of 07:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0516500| Description = Reticulon family protein| Version = NM_001070207.2 GI:297609812 GeneID:4347580| Length = 4167 bp| Definition = Oryz...")
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Gene Name

Os09g0516500

Description

Reticulon family protein

Version

NM_001070207.2 GI:297609812 GeneID:4347580

Length

4167 bp

Definition

Oryza sativa Japonica Group Os09g0516500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20771209..20775375

Sequence Coding Region

20771530..20771681,20771777..20771843,20772374..20772530,20772711..20772898

Expression

GEO Profiles:Os09g0516500

Genome Context

<gbrowseImage1> name=NC_008402:20771209..20775375 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20771209..20775375 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aattttgttgcagctgctgatattctcctttggagggatgaaaagaaaacattttcatatgtcacagtattgtttctgctgttctactggtttctgctttccgacagaacttttgtctcgtcagctgccaaaattcttctggtgatctcgctggcacttttcatccatggcgtgctgcctccacaagtgttcggtttcacagttgagaaggttacttctgattattttgaagtatcacaagaaacattgaagaatacacttgtgtggatggcttctatatggaatggaggcatttataaattgagggttttagcagaaggcgatgactggactacgtttctaaaggcatttgcattcttgtactgtgtgaaagtaatgttgaacttacaattcagaatgctgatgggtcttgtactggcatttatgttcgttgttttcattgtctatgagcaatgcgaggaggaaatagacagtttagtagcttttgcttccgtcaaagtcaaatccctagtgggaaaagtgattggaaatttgccggatgcgttgaaggcatacatatcttag</cdnaseq>

Protein Sequence

<aaseq>NFVAAADILLWRDEKKTFSYVTVLFLLFYWFLLSDRTFVSSAAK ILLVISLALFIHGVLPPQVFGFTVEKVTSDYFEVSQETLKNTLVWMASIWNGGIYKLR VLAEGDDWTTFLKAFAFLYCVKVMLNLQFRMLMGLVLAFMFVVFIVYEQCEEEIDSLV AFASVKVKSLVGKVIGNLPDALKAYIS</aaseq>

Gene Sequence

<dnaseqindica>3695..3846#3533..3599#2846..3002#2478..2665#aacccgtcgtcttcgcctagtcccaccatctttctcccactccctcccctcccctccacccccaccagcgatggcgaccgccgagcccggcccgggcccgggcccacgcaagcccgcctgctgcgccgtcaccttcggccgctccaccctcctcggccgccacctcgccgccgcgctcgccgcctccggccgctggtccaccgtcgccgtcctcgacccctctccgcccaccacaaccaccaccacctccccgccgccgggctccccgctcgcccaccaccacctcgccgtcgacctctgcgaccccgcctccctcgcccgcgcgctcgccggggtcgaggccgtcttccacgtggaccccaccggcgacgggtcctccttcctgcaactgcaccgcctcgccgtggagggcacgaggcggctcctcgccgcctgctgccggagcggcgtcaggacggtggtgtacaccggctcggccgacgtggtggtcgccggcgcgcgggatgtggtcgacgcggacgaggacgccttgccttaccctgacaaggtacggactcgagtgctccactcgcggcattgtgctgctctcttgtcgtgatctggtcgtggcgtcgctcgctggatggtagtgttcaagcttcggatccttggctgtggtggactgtggagtgacacttgcttggtctctgtggctgtggttgtgcagttaggaaatgcagcgatcgagctgagggcgcaggtggagatgatggtgctgagtgcggatgggaagaacggaatgcggacgtgcgtgttgcggccgagcaatatgtttgggccgggcgattcgagcctcgtgcggttcgtcgctggatatgcgaggtcttcccttggcaaggtactccaaacccagctagtagcttgttttctgtttgctagcttgatagcttggtcaatttcatactgatatgatccatgaagtaattgtatttaagggttcatggtttcatggtgtggactgttgagtgtaaaatcagttctctcatttggtggtcaattacaactccggatctagcagtcatgctttccttttgaaataatgcagatgcagcatgctactctagttagtctattaattggtttaggcttatagttcttagcaactcagccactttgactcaatcagatcatcatgatctatgcagtcttaatacttcaatgttggaattgcatcctgttccaatctgggcttcgattttttttagataatggataataaaaatccggcctctatatccacaagtggatatacacagccaaaggttacacgagtccttagacttcgagtctcataactgagatacttcaatctgggcttcgatttgcagatgtaatattggttattctagctacttacacatgcctgttcagtttgtagtaggtagtggtgctaatatgtgtgacttcacttatgtggaaaatgtggcccatgccaacatctgtgctgagcaagctttatgttcaaacgcaagttctgttgctggaaaggtacgtttttacaaattgaaatcctataatttggtcatcttactttgatagttaattgttccatctaaaactttgcagcccttttttgttaccaatgatgaacctattgaaacatgggagtttatgtcttgtttgatggaagccatgggttgtcagaggtctctctctttttgtctcactctgacatgcgcacaaacagaaagcacatgtacatgcacaaaaggctattcgagaaatttactgttgcctctcttttattttcttaggcccaagtttaatctccccgccaagatcttgtcatctgcagccttattctccaacatgatgtatcacaagttgggtttacaaatattatcttccccacttctccatcctgacatggtatacttcttgtcatgcacaagaactctcagcatttcaagagctagaaagctacttgggtaccacccaatcgtatcattggaggtgagctctttccgaccttgcagtattgataatcattcatttcaccttgtcttctcaatatattttgcattttactctttctggcgttccatatttattgttgatctctttatcttctcaaagaagcctgtgagtgttttttccctaactttaatgttgatataccatagttttgatgcttgatgtgcatgcaggatggcatcatgagaactgttggatcattatcagaactaccagataagttggatctgtccaggaaaagaggctcttttggatcatcaaaagcagagaagctgctaggcagtggaataagtgagatatactcttctgcaagacaaataacttcccccttttcttctgtgcttgccaatgaattatacaaaaccagaactttctgatattgaattgtggttttccaagatgccttgcgttgttgtttactcattgttttgttaccatacatgtcttattgttaattttgctaaaattttgttgcagctgctgatattctcctttggagggatgaaaagaaaacattttcatatgtcacagtattgtttctgctgttctactggtttctgctttccgacagaacttttgtctcgtcagctgccaaaattcttctggtgatctcgctggcacttttcatccatggcgtgctgcctccacaagtgtatgtatattgattccctgtgattttcagctatcttttaattaataatgatgcaattgagtcatgtacctgtttttaggtagagatgctttatagagaagtaaactaaccttcttttggatactctacaatttgtacaagaaattttaataaattatgaacaaccaactcttgttgcaggttcggtttcacagttgagaaggttacttctgattattttgaagtatcacaagaaacattgaagaatacacttgtgtggatggcttctatatggaatggaggcatttataaattgagggttttagcagaaggcgatgactggactacgtttctaaaggtttgtgttcagccagttgtaaatggtggatcctggaagctttcatttctaagaatgcgcttccagatttaaatgttctgcatctacgggtgcagaggccagaatatttattccattatctaaaaaaagttacaaattattattgagcagccatgctaagccatttatactgttggattacttgatatactttatggctttacacgagatgtatgagtgccataaaatttctcaaccaattaatatgggatacaattatcttgctgttcttggttggtatgttagctagtatggctaactgattttcataaagaatcattcatcctgtcacaaatagttgatatttgataactctccgtgcgtatcaatccttggttcaccattgcttagaaggacaacaaactagctgtttgcaacctttactcctgacccaacctatgccatcgacaatatggttgcaacaatggtgcacttgtgagaattgttttctgctataaatgattggtccatgttcatttgttaaattgcaggcatttgcattcttgtactgtgtgaaagtaatgttgaacttacaattcagaatgctgatgggtcttggtaaggacatatctgtctttacatcctgcattatgctcatttactatcatcgtactatcaattcatcatctgattatccaatctcctaaatgcagtactggcatttatgttcgttgttttcattgtctatgagcaatgcgaggaggaaatagacagtttagtagcttttgcttccgtcaaagtcaaatccctagtgggaaaagtgattggaaatttgccggatgcgttgaaggcatacatatcttagaggcaccgctgaccatgactacgtgacgctttgcgcaattctcgaaggtattgttgccatttcgtttgtctcagttaacatttcatgtacaattcacccacccaaatgttggtttgctcttttcagattattgctctaagcaagttttgaattgggaagccttgccgggtgctgaccgcttgagggactagggttcatgatccagactccagaatccagagcattcttctctctgcttctgtatcaaaaatatcattccaagatcgcttaagatgcactttgcttcagctccttacttctgtagttctgtatagagcgtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0516500, RefSeq:Os09g0516500