Os01g0715500

From RiceWiki
Revision as of 18:57, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0715500

Description

Similar to Voltage-dependent anion channel

Version

NM_001050598.2 GI:297597500 GeneID:4325576

Length

2765 bp

Definition

Oryza sativa Japonica Group Os01g0715500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31526326..31529090

Sequence Coding Region

31526326..31526632,31526854..31527062,31527153..31527242,31527407..31527493,31528707..31528774
,31528895..31529090

Expression

GEO Profiles:Os01g0715500

Genome Context

<gbrowseImage1> name=NC_008394:31526326..31529090 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31526326..31529090 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcggagacggagtgcaaggtccccggcgtctactccgagaccggcattcccgtggaggatccggctcccggcctcaactccgacgtcagcaagaaggacgcccctcctgccgttgcggcgccgggtcccggcctctacttcgagatcggcaagaaggccagaggtgtacacgcgctcttcatcttgtttgatcttctgtacaaggacttccacacggaccagaagtttaccctgaccacctacaccaacaatggagttgtaatcactgctgcaagcacaatgaaagatgaagctatctttagcgagatccagaccaagctgaagagcaataatgtgatgctggatgtgttaactacaatcacaactgaagaccttggtgtatcaggcttgaagcaaatcgtatcacttccttttccataccagacagctgggaaggctgaactccagtacctgcatgactacgctggtatcagcctcggtgttggcctgacctcaaagcctttggttaacctttctggtgtgttcggcaacaaatctgttgctgtcggtgctgatgttgcagttgatacttctactggggacttcaccaagtacgatgctggactgaccatcaacaattcagatcttgctgctgatctgacgctgaacaacaaaggggacagcctcactgcgtcctactaccatctggtgaacaaagagtcaggtacggctgctggagcggagctgacccacagcttctcgaccaaggagaacaccctcagcttcgggatgcagcacgccctggaccctctcactaccgtgaaggcgcgctacaacaaccacggcatggtcagcgccctcatccagcacgagtggagacccaagtctttcttaacgctctccgccgaggtcgacaccaaggcgatcgacaaggcctccaaggttggactgtcgctggttctcaagccctga</cdnaseq>

Protein Sequence

<aaseq>MEAETECKVPGVYSETGIPVEDPAPGLNSDVSKKDAPPAVAAPG PGLYFEIGKKARGVHALFILFDLLYKDFHTDQKFTLTTYTNNGVVITAASTMKDEAIF SEIQTKLKSNNVMLDVLTTITTEDLGVSGLKQIVSLPFPYQTAGKAELQYLHDYAGIS LGVGLTSKPLVNLSGVFGNKSVAVGADVAVDTSTGDFTKYDAGLTINNSDLAADLTLN NKGDSLTASYYHLVNKESGTAAGAELTHSFSTKENTLSFGMQHALDPLTTVKARYNNH GMVSALIQHEWRPKSFLTLSAEVDTKAIDKASKVGLSLVLKP</aaseq>

Gene Sequence

<dnaseqindica>2459..2765#2029..2237#1849..1938#1598..1684#317..384#1..196#atggaggcggagacggagtgcaaggtccccggcgtctactccgagaccggcattcccgtggaggatccggctcccggcctcaactccgacgtcagcaagaaggacgcccctcctgccgttgcggcgccgggtcccggcctctacttcgagatcggcaagaaggccagaggtgtacacgcgctcttcatcttgtttggttctcttttttctgggtggtttttgaggggggggggattggtggtggcggttgctggcttgagcaaattttagtggagtggtttgctgatttctgctgcttttcctggtgtttttgcagatcttctgtacaaggacttccacacggaccagaagtttaccctgaccacctacaccaacaatggagttgtgagcattaccgatttccgcatgctttttactggttcctttcttgtggacatcttggctcgcttgctttcgattgtttgtgtgtatgtggtggtttggaatggtttgagtaggaggatctcggtggctgtgtgatgtgcgtgtcggagttgtgttggttagcggggctcggtgtggtccgagcttgtgtgtgtggcgggttgcggccagtgtgtttgtggaattgacctgcgggtttactgagttttggtctgatttgattttgagttgagttgggttgaagagttgatggatagtgcattttactttttctccttcctggtgttggatgagatggtgaatcggtgatcgaagcgtcgattgggtttttctgttcgattgacaggtggtcaatctgtcaggttgatgtttgttacgatgtttccactgggttttttgttcgttggatggttggtaaatctgtcaggtttcggtttggtgatcgaagaattgactgggtttatttgttcggtccatgggtggtcaatctgtcagtgtcaggtttcggtttgtgatggaagagtcgattgagttttttctgttcgatcaacaggtgatcaatctgtcgggtttcagtttgtgatcgaagattcactgggttttttgttggatgaatgggtggtcaatccgtcatgtttcggtttgtgatggaagggtcgattggggtttttgtgttcgatcgacaggtggctaatcagtcaggtttcggtttgtgatcgaagagtgctttggattttttatgtatttctgttagatcgatgggtggtcaatctgtcagcgtcaggtttcactttgttatagtaagatgcttccattccgttgccagtttagtgggtttctttttgttagaatttactactaatttcgtagttcttaaattgtgcaacgagttgacttgttgataattttgggtttcagtcgagaggttcccagtgataattttttatggtttagcttatacgagtactgctttgtttgatctttccttcagtagatgctgcatgtcaacgtcaacttgtgtgtgtttgtacggatcagaggatctcaatccgtgtttgtactgatgctttgtatcatgggtgtcaattgcagattgcgttggatatcttgttgtctactaatataataatcaaatatgactcttattatttgatttctgtgattctgtctataggtaatcactgctgcaagcacaatgaaagatgaagctatctttagcgagatccagaccaagctgaagagcaataatgtgatgctggatgtgaaagctacttccgattctcaggcaagtttctccttgaaaatgcccttcatctatcaaatgttatctgattattacttcctgattaaactcgctggtgatggactataaattgagtcagtagcttatctactggtgattgatttgtgtttaacttttcccaggtgttaactacaatcacaactgaagaccttggtgtatcaggcttgaagcaaatcgtatcacttccttttccataccagacagctgggaaggtatatgcatcttcatctctgctagattggttgggtcttttagatttcaaattgacttaccgtttgtgactctctgccttgtggttgcaggctgaactccagtacctgcatgactacgctggtatcagcctcggtgttggcctgacctcaaagcctttggttaacctttctggtgtgttcggcaacaaatctgttgctgtcggtgctgatgttgcagttgatacttctactggggacttcaccaagtacgatgctggactgaccatcaacaattcagatcttgctgctgatctgacgctgtaagtgttttcttctaacgtgcccactgtaacactgttaagttgcttgcaattttacgattcatgtctacaatatttccatgtgcgtacctgtttgctagcttgaggatacattcctcttaatctgacttctcagaaactcctaatcgaagcaaattttctgtaatgttgcagtttctcttttgtatccatgcgtgaaatccttggcttcccattttcaggaacaacaaaggggacagcctcactgcgtcctactaccatctggtgaacaaagagtcaggtacggctgctggagcggagctgacccacagcttctcgaccaaggagaacaccctcagcttcgggatgcagcacgccctggaccctctcactaccgtgaaggcgcgctacaacaaccacggcatggtcagcgccctcatccagcacgagtggagacccaagtctttcttaacgctctccgccgaggtcgacaccaaggcgatcgacaaggcctccaaggttggactgtcgctggttctcaagccctga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0715500, RefSeq:Os01g0715500