Os06g0659100

From RiceWiki
Revision as of 09:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0659100| Description = Similar to Squamosa-promoter binding protein 1| Version = NM_001064796.1 GI:115469323 GeneID:4341729| Length = 1889 ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0659100

Description

Similar to Squamosa-promoter binding protein 1

Version

NM_001064796.1 GI:115469323 GeneID:4341729

Length

1889 bp

Definition

Oryza sativa Japonica Group Os06g0659100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27992097..27993985

Sequence Coding Region

27992097..27992776,27993228..27993427,27993585..27993985

Expression

GEO Profiles:Os06g0659100

Genome Context

<gbrowseImage1> name=NC_008399:27992097..27993985 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27992097..27993985 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgagcggtaggatgaacgcggcgggggacgagtcgccgttcccgttcggggcgatgcaggcgccggggccgggggcgtacgtcgggttcgaccatggcgcggcggcggtggcggcggcggctgcggcggcgcagcgggcggggatgctgcagcaccaccaccaccacatgtacgacggcttggacttcgcggcggcgatgcagttcggcggcgggcaggacgcgccgccgcacccgcagctgctggcgctgccgccgagcatggcggcgccgccgccgccgcccatgccgatgccgctgcagatgcccatgacgatgccgatgcccggagacgtgtacccggcgctcggcatcgtgaagcgcgagggcgggggcggaggtcaggacgccgccgccgggaggatcgggctcaacctcggccgccggacctacttctcccccggcgacatgctcgccgtcgaccgcctcctcatgcgctcccgcctcggcggcgtgttcggcctcggcttcggcggcgcccaccaccagccacctcgctgccaggccgagggctgcaaggccgacctctccggcgccaagcactaccaccgccgccacaaggtctgcgagtaccacgccaaggcctccgtcgtcgccgcctccggcaagcagcagcgcttctgccagcaatgcagcaggtttcacgtgctcacggagtttgatgaggccaagaggagctgccggaagcggctggcggagcacaaccgtcgccggcggaagccggcggcggcggcgacgaccgccgtggcggcggccaaggacgcggcggcggcgccggtagccgccgggaagaagcctagcggcggcgccgccacgtcttacaccggtgacaacaagaacgtggtgtccatgagcgcggccaagtcgcccatctcgtcgaacaccagcgtgatcagctgcctgcccgagcagggcaagcatgcggcggcggcggcgaggccgacggcgctcacgctcggcggcgcgccgccgcacgagagctccgcgccgcagatcggcgccatgctccatcaccaccaccatcaccagcaagaccacatgcaggtgagctccctggtccacatcaatggcggcggcggcggcggtagcaacaacatcttgtcgtgctcgtcggtgtgctccagcgcgctgccgtcgacggcgaccaacggcgaggtatcagaccagaacaacgacaacagccacaacaatggcggcaacaacaacaacatgcatctgttcgaggtcgacttcatgtag</cdnaseq>

Protein Sequence

<aaseq>MMSGRMNAAGDESPFPFGAMQAPGPGAYVGFDHGAAAVAAAAAA AQRAGMLQHHHHHMYDGLDFAAAMQFGGGQDAPPHPQLLALPPSMAAPPPPPMPMPLQ MPMTMPMPGDVYPALGIVKREGGGGGQDAAAGRIGLNLGRRTYFSPGDMLAVDRLLMR SRLGGVFGLGFGGAHHQPPRCQAEGCKADLSGAKHYHRRHKVCEYHAKASVVAASGKQ QRFCQQCSRFHVLTEFDEAKRSCRKRLAEHNRRRRKPAAAATTAVAAAKDAAAAPVAA GKKPSGGAATSYTGDNKNVVSMSAAKSPISSNTSVISCLPEQGKHAAAAARPTALTLG GAPPHESSAPQIGAMLHHHHHHQQDHMQVSSLVHINGGGGGGSNNILSCSSVCSSALP STATNGEVSDQNNDNSHNNGGNNNNMHLFEVDFM</aaseq>

Gene Sequence

<dnaseqindica>1..680#1132..1331#1489..1889#atgatgagcggtaggatgaacgcggcgggggacgagtcgccgttcccgttcggggcgatgcaggcgccggggccgggggcgtacgtcgggttcgaccatggcgcggcggcggtggcggcggcggctgcggcggcgcagcgggcggggatgctgcagcaccaccaccaccacatgtacgacggcttggacttcgcggcggcgatgcagttcggcggcgggcaggacgcgccgccgcacccgcagctgctggcgctgccgccgagcatggcggcgccgccgccgccgcccatgccgatgccgctgcagatgcccatgacgatgccgatgcccggagacgtgtacccggcgctcggcatcgtgaagcgcgagggcgggggcggaggtcaggacgccgccgccgggaggatcgggctcaacctcggccgccggacctacttctcccccggcgacatgctcgccgtcgaccgcctcctcatgcgctcccgcctcggcggcgtgttcggcctcggcttcggcggcgcccaccaccagccacctcgctgccaggccgagggctgcaaggccgacctctccggcgccaagcactaccaccgccgccacaaggtctgcgagtaccacgccaaggcctccgtcgtcgccgcctccggcaagcagcagcgcttctgccagcaatgcagcaggtaagctactgctccgccatcaccgtgctacagcgtgtcgccatgattcgctgtacttgctttcttgaattctttctctcgccatgaccggtctcgggatcgatggagagagagagagagacaagcggaaaatcgcgcaggaatcgaacgaaaagctgcgagctagtagctgccaactttttcttgattcctcctctctttctgcactgccacgatgcgacgatggtctgtgcgtatctctctgcgtcgcctgcatgatatgcttttctttttgagtttttctctctctttatctctgctgctgctgctgctgttactgccatcccatccacgcattgaccaatgcagcagcattattcgtatagtgtactacgtatagtatgttgtgtgatgtacacgttttaatctacagaattgtgacattgtgggtgtacgtacatgtgttggataggtttcacgtgctcacggagtttgatgaggccaagaggagctgccggaagcggctggcggagcacaaccgtcgccggcggaagccggcggcggcggcgacgaccgccgtggcggcggccaaggacgcggcggcggcgccggtagccgccgggaagaagcctagcggcggcgccgccacgtcttacaccggtgacaacaagagtaagctctaatcgatgacgctagatagctgtaataattggctgtattacctgagcaaaggccgggattctattctattatctaaaaaaaaagattgcattctctgctacactctgccgttcgtttttaacatgaactgatcgattaattgatgcagacgtggtgtccatgagcgcggccaagtcgcccatctcgtcgaacaccagcgtgatcagctgcctgcccgagcagggcaagcatgcggcggcggcggcgaggccgacggcgctcacgctcggcggcgcgccgccgcacgagagctccgcgccgcagatcggcgccatgctccatcaccaccaccatcaccagcaagaccacatgcaggtgagctccctggtccacatcaatggcggcggcggcggcggtagcaacaacatcttgtcgtgctcgtcggtgtgctccagcgcgctgccgtcgacggcgaccaacggcgaggtatcagaccagaacaacgacaacagccacaacaatggcggcaacaacaacaacatgcatctgttcgaggtcgacttcatgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0659100, RefSeq:Os06g0659100