Os01g0728300

From RiceWiki
Revision as of 18:57, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0728300

Description

Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment)

Version

NM_001050664.1 GI:115439698 GeneID:4323921

Length

4709 bp

Definition

Oryza sativa Japonica Group Os01g0728300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32128050..32132758

Sequence Coding Region

32128491..32128916,32129850..32130228,32130803..32131047,32131407..32131627,32132374..32132662

Expression

GEO Profiles:Os01g0728300

Genome Context

<gbrowseImage1> name=NC_008394:32128050..32132758 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:32128050..32132758 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgggagaggccgcctcaccgtggagcctggccggcgcgggcgcggccgtggcgctgctgtggctgtgcgcctggacgctgcagtgggcgtggtggacgccgcggcggctggagcgggccctgcgggcgcagggcctccggggcaccaggtaccgcctcttcatcggcgacgtggccgagaacggccggctcaacagagaggccgcgtcaaggccgctgccgctcggctcgcacgacgtcgtcccgcgcgtcatgcccttcttctgcaacgtcctgaaagagcacgggaaactgtcgttcgtttggactggcccaaagccattcgtgattatcagagaccctgacttagcgagggagattttgtccaacaagtctggcaatttcgccaagcaaacgaccgcgggtattgctaagttcgtagttggcggagttgtaacgtatgaaggtgagaaatgggcaaaacatcggagaattctcaaccctgccttccaccaggagaaaataaagcggatgctgccagtgtttttagcatgttgcaccaaaatgatcactagatgggtgaattcaatgtcttcagaaggaatatctgagttagacgtttgggatgaatttcaaaatcttactggagatgtcatctcaagaacggcatttgggagcagctaccaggaggggtggagaatttttcagttacaagaagagcaagctaaacgcgtacttaaagcttttcagagaatctttatcccaggctactggtacttaccaatcgaaaacaacagaaggatcagggaaattgatcaagaaatccgcacaattctgcgaggaataatagtaaaaagagacaaggcagttagaaatggtgaaggtagcaatgatgatttgttgggattattggtggaatcgaatatgaggcaatcaaatgaaaaagaagatgtgggaatgagtatagaagatatgattgaggaatgcaagttattttacgctgctggttcggagacaacatcaatgttgctcacttggactttaattctgctaagcatgcaccctgaatggcaagagcaggcaagagaggaagtgatgcaccattttggaagaaccacaccagatcatgatggcttgagtcgtctaaagattgtaacgatgattctccacgaggttcttaggttgtacccaccggtggtattcctccaaagaacaacacacaaggaaatagagcttggtggcatcaaataccctgaaggagtgaacttcacattgcctgttctatccattcaccacgatcctagcatctggggacaagatgcaatcaaattcaacccggaaaggttcgccaacggagtctccaaggcaacgaagtttcagaccgcgttcttttcgtttgcatggggtcctcggatctgccttggccagagctttgcaattctggaagccaagatggcgctcgccaccatcctccagagcttctccttcgagctctcgccgtcatacacccacgcaccacacaccgtgctaactctccaaccacagtacggttctccaattaaattgaagaagctctag</cdnaseq>

Protein Sequence

<aaseq>MLGEAASPWSLAGAGAAVALLWLCAWTLQWAWWTPRRLERALRA QGLRGTRYRLFIGDVAENGRLNREAASRPLPLGSHDVVPRVMPFFCNVLKEHGKLSFV WTGPKPFVIIRDPDLAREILSNKSGNFAKQTTAGIAKFVVGGVVTYEGEKWAKHRRIL NPAFHQEKIKRMLPVFLACCTKMITRWVNSMSSEGISELDVWDEFQNLTGDVISRTAF GSSYQEGWRIFQLQEEQAKRVLKAFQRIFIPGYWYLPIENNRRIREIDQEIRTILRGI IVKRDKAVRNGEGSNDDLLGLLVESNMRQSNEKEDVGMSIEDMIEECKLFYAAGSETT SMLLTWTLILLSMHPEWQEQAREEVMHHFGRTTPDHDGLSRLKIVTMILHEVLRLYPP VVFLQRTTHKEIELGGIKYPEGVNFTLPVLSIHHDPSIWGQDAIKFNPERFANGVSKA TKFQTAFFSFAWGPRICLGQSFAILEAKMALATILQSFSFELSPSYTHAPHTVLTLQP QYGSPIKLKKL</aaseq>

Gene Sequence

<dnaseqindica>3843..4268#2531..2909#1712..1956#1132..1352#97..385#ggtcttgcgacaccaccgattgttcggcttgcactgacaccaccggaggctgagagcccgccaacggcgaaggagagttgcaccggcgcgtcgctgatgctgggagaggccgcctcaccgtggagcctggccggcgcgggcgcggccgtggcgctgctgtggctgtgcgcctggacgctgcagtgggcgtggtggacgccgcggcggctggagcgggccctgcgggcgcagggcctccggggcaccaggtaccgcctcttcatcggcgacgtggccgagaacggccggctcaacagagaggccgcgtcaaggccgctgccgctcggctcgcacgacgtcgtcccgcgcgtcatgcccttcttctgcaacgtcctgaaagagcacggtaacacaccactgccagctgatcaccatgttccccatggcttttgtgatgtcaaaaacgccgcgcgcttctggtattgaaccagcgactagcatcgctcgtcgcctcgtcgcaattcgttcttctcggggagggattgtcccggatatgaagggtcaaacggtagttccgtttgtgcattattaacaggtggcttacgtgtcagatttaaggtcatgttctttttaaattattcagtggattattgtggcagattatctaattcctccgtttcattctaacatttctcacattcatattgatattaatgaatctaaatagatatatatgtctagattcattaatatcaacatgaatgtggaaaatgttagaatgacttacattgtgaaacggagggagtacttgatatagagataaatcgaatatttagattcaaaataagtggtctaagcgatgcagaataagaaaaaaaaatttagaaaacatattttcgaagagttgagcaaataatatgttctaaccaaaattttttgacatgatagcaaacctgacaacactcacatatttcattctactgaattttggcactatcaaattttgataaattttggtattgccaaattttgaaagggttaattttagtattaaagtggatagacccttcaaatatcctgtgttattcaccttagtaggatacgtagaatatattgtctcccttctcatcagactctttagctcaattgcagggaaactgtcgttcgtttggactggcccaaagccattcgtgattatcagagaccctgacttagcgagggagattttgtccaacaagtctggcaatttcgccaagcaaacgaccgcgggtattgctaagttcgtagttggcggagttgtaacgtatgaaggtgagaaatgggcaaaacatcggagaattctcaaccctgccttccaccaggagaaaataaaggtagctgttccatatgagagccaatctgctgaaaattttgttacttgttgatttgatttgtcgcgagcaatatttggagatgttgcacaacatgtgtgggatggtgcaatagcgcaatgtacaagtactcgcaaccttttcaaatactgctcacaacaaatcaaaatcaaggactgcagcacatttttcacattttcaactcttagcacagcatatttccacatgataggtccgtgtagtaatattgttttccgctgcttttattttctaactttatatagtgtagaattcatactatttttcgtgggatatgccctccctaaaatctgaattgattaacagttatcttttgctcacagcggatgctgccagtgtttttagcatgttgcaccaaaatgatcactagatgggtgaattcaatgtcttcagaaggaatatctgagttagacgtttgggatgaatttcaaaatcttactggagatgtcatctcaagaacggcatttgggagcagctaccaggaggggtggagaatttttcagttacaagaagagcaagctaaacgcgtacttaaagcttttcagagaatctttatcccaggctactggttggtactttgctttttatacatttggagggggaaaatggacttctgggagtaaatttccaataatttgacaaacagttgctattattatcttctctatcattgaaataaggaaaaacttttgcctcccctctaatatagagtaattctttagattagtacagacaattatgaaagtagattgaattgttcttttacccttcattttatatcgcaaatggaaaatataagtccttttattatgagaacaatatcattatttattaggcaagattaagaaggtaagaaagataattataaactaagttgttggactatttgacataacacaccgttttataagctttctagtgcattgtgaaatgaaaaaaacatatgatacacgaaatacagaagcttaaagaaaagtagtattctttttttatatatagatgaaaggatttgcaagagaagtacatagttgatttttgttttctaagagaatgaatgtgtttgtggacatacattttgatgcagcatacatatatacagatgtcaaaactacttttttttcatcctttttatatttctgtaggtacttaccaatcgaaaacaacagaaggatcagggaaattgatcaagaaatccgcacaattctgcgaggaataatagtaaaaagagacaaggcagttagaaatggtgaaggtagcaatgatgatttgttgggattattggtggaatcgaatatgaggcaatcaaatgaaaaagaagatgtgggaatgagtatagaagatatgattgaggaatgcaagttattttacgctgctggttcggagacaacatcaatgttgctcacttggactttaattctgctaagcatgcaccctgaatggcaagagcaggcaagagaggaagtgatgcaccattttggaagaaccacaccagatcatgatggcttgagtcgtctaaagattgtaagtatgacttcaacattctctgatgttttccaaaatagcaaagtagtttatataaacttcagttcattttgagatttcattgccagaataattttctacggcttcagaacaaattgttcaaaaacatgtcaaccttttgtctattccccatcaaaattgattagtaaatatgcttatggaatctatcttttccacaatcaagtgaaatactagctaattccagagatttgctcccttcatcctaattgtaaggtgtccatattttaaggaaagacaacatttacaactttcgactagtaattaaattagcaatatatatttttagttttatgcatataacatcattagatttttatttgaaagtatttatatgatgctgattatgtaatttgtgatatatgttatgcaaaaaaaaagaattaatggctaaagttctaatatgtgaagaccatgtaagaaacttacattttaggatagaggaagtatgttccaaggccctgttctattcttcaactccaaactccaacttccttgttttccattagcactcttttcaaactgttaaatggtgcgtctttttttttaaaaaaaaatctatataaaagttgcttttaaaaaacaaataaattcattaattgtaataattaatagttaattaaccatgtactaatgagatttctcgttttgtgtgcaacctacatttatctccaaatgtgaaggtctaacggggcctaaatttaaaatctttgtaccattgttatggtggacagtggtgaagttgtgggtacatgactttaactcaaatcatgatgtttacaaatacgcctgcacatgtttagttggtgtagaggctttaagttatactttcatcatctaaaaatgctcagaataattgtatcaaccgcatttatctttgttgtatttttgcaggtaacgatgattctccacgaggttcttaggttgtacccaccggtggtattcctccaaagaacaacacacaaggaaatagagcttggtggcatcaaataccctgaaggagtgaacttcacattgcctgttctatccattcaccacgatcctagcatctggggacaagatgcaatcaaattcaacccggaaaggttcgccaacggagtctccaaggcaacgaagtttcagaccgcgttcttttcgtttgcatggggtcctcggatctgccttggccagagctttgcaattctggaagccaagatggcgctcgccaccatcctccagagcttctccttcgagctctcgccgtcatacacccacgcaccacacaccgtgctaactctccaaccacagtacggttctccaattaaattgaagaagctctagtgatctcggtcgaggagaacataaagctaccccgtacatgctgaaatctaaatctatatgaataaatttcataaaactacatgtattttaatcaaattatcacaaactatagatttaacacaatatttattagagaactacaaatttagggccaagtacaaaactatagatttaatactagagttatcacaaaactacaggttttatagtttaaatctctgccactaatgttacgttagagttataaatgttgcaagttttgtacttaacatggtgccaacaatgtagttttgtgataattttattactaaatatgtactccctccatcctaaaataagcgcacccatgagttttttgtgtctaactttgatcgcccgtattttttttatgatcagtacttttattgttattatattataaaacatgaatggtacttgtcg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0728300, RefSeq:Os01g0728300