Os06g0660600

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Revision as of 09:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0660600| Description = Homeodomain-like containing protein| Version = NM_001064805.1 GI:115469341 GeneID:4341739| Length = 3551 bp| Defini...")
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Gene Name

Os06g0660600

Description

Homeodomain-like containing protein

Version

NM_001064805.1 GI:115469341 GeneID:4341739

Length

3551 bp

Definition

Oryza sativa Japonica Group Os06g0660600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:28093293..28096843

Sequence Coding Region

28093293..28093838,28094028..28094224,28094291..28094516,28094598..28094727,28096539..28096843

Expression

GEO Profiles:Os06g0660600

Genome Context

<gbrowseImage1> name=NC_008399:28093293..28096843 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:28093293..28096843 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgcctccgggtgacccgcccacgagatcgacgcagcagcacgcaaccagccaacggtacgacgatcgggggggaacggcggcgccgggcgattcccttgcagcagcggcggaggcggcggccgggcaattggggcgggcgacgggcaggatgaggaagctccgcgccggagagaggatccccggaggtgggcggccgccggcgagaggccgcgaggggggagggggaggaaaccctaggggcgtggaggaggcgctcttcgatttggggggagaagggggggaggaggaggaggaagaggggatgatggataaaagtattggtggctcaagtgctcgcgctagcgaatctgaagaaatatttgggacagatcagtgggcttttgggttttctgccgctttgcattcttttgatgttcctccgaacccccagttcaacatgcatggctcgtcccaaatgtcatgcccacctataaatgagcaacctagccaggggctctccattgacaacaacattggctctgaggaccctccatcattgaaatcacagagggctgcaaagaagaagaaggtgtccaggagaggaattgcattcaccaaagaggaggacatggtggtgtgttcagcatttctgaatattagcaaagaccctattacaggtgtgaatcaaacttcaagtggttattacaagaggatgcgtgattatttcaatgagcacaaacctgaagggtccaaccgtagccagattgctattcagcacaggtgggcattgattcagaaagcgataaacaagttctgtgggcacaaagcagctgttgataggctaaatgagagcggaaaaaatgagcaggatcgggccaaatggaacaataagtttcttgagctaaacaactctacatcacctgatcgaatggaacctccttcaactcaaggccatactgtagccggccatgcagaatctgggaatgagaatatagacacaacacggcctgagggtagggatagtgcgaagaggcgtagattgaagagctatgcagagacatcatcatctagtacaacagttgaagtcctccagcggttgcaggagaaatcagagaagaccgaactgaagcaagaccagcagatggttgaaatccttagtaggaaggacgaaaaaattaaaattcagagggatcttttcaaccttcagaagaagcatatgaagatgagtgtgaagcagcacaagaaggaaaatgagattagggagaagcagactgaggctcaactgatgtcagctgagtctagtattatgtccattgacattgagaaggtccccccttatctgaagaactattatctaggcatgcaacgacaaatcatggagcgcagaggattcagtagtcccttgaacaacggagactaa</cdnaseq>

Protein Sequence

<aaseq>MPPPGDPPTRSTQQHATSQRYDDRGGTAAPGDSLAAAAEAAAGQ LGRATGRMRKLRAGERIPGGGRPPARGREGGGGGNPRGVEEALFDLGGEGGEEEEEEG MMDKSIGGSSARASESEEIFGTDQWAFGFSAALHSFDVPPNPQFNMHGSSQMSCPPIN EQPSQGLSIDNNIGSEDPPSLKSQRAAKKKKVSRRGIAFTKEEDMVVCSAFLNISKDP ITGVNQTSSGYYKRMRDYFNEHKPEGSNRSQIAIQHRWALIQKAINKFCGHKAAVDRL NESGKNEQDRAKWNNKFLELNNSTSPDRMEPPSTQGHTVAGHAESGNENIDTTRPEGR DSAKRRRLKSYAETSSSSTTVEVLQRLQEKSEKTELKQDQQMVEILSRKDEKIKIQRD LFNLQKKHMKMSVKQHKKENEIREKQTEAQLMSAESSIMSIDIEKVPPYLKNYYLGMQ RQIMERRGFSSPLNNGD</aaseq>

Gene Sequence

<dnaseqindica>3006..3551#2620..2816#2328..2553#2117..2246#1..305#atgccgcctccgggtgacccgcccacgagatcgacgcagcagcacgcaaccagccaacggtacgacgatcgggggggaacggcggcgccgggcgattcccttgcagcagcggcggaggcggcggccgggcaattggggcgggcgacgggcaggatgaggaagctccgcgccggagagaggatccccggaggtgggcggccgccggcgagaggccgcgaggggggagggggaggaaaccctaggggcgtggaggaggcgctcttcgatttggggggagaagggggggaggaggaggaggaagaggggtaattaggatttgagggcgactcgagaacctacggaaataaaaacgagatccgcgcggtgcgcggtggtgcgccgagcgcgagatccgaccgttgacgtcggggtgggccccacgtgcacggcgcgtgttggggggtgggtcccgctttgccgtctcgccgacgcgctcggttagttagccgttggggggtgggggagagggggctttggttgggccttgggccgggccgttttcacgagttcgaaatcgtcccggcgagcgtcgccggggagcggttggaatgagagaaaccaacggtataattagtagagggctcgaggctactgcttcattcgtgctagaatattataacctataactaatggaataacatagtaatccaaatctgaatatatttatcagttagtctctttaattataggttctgtttaaattatagtactaaattaagttatattcgattttaggttgtaatattcacatatggagggagtatgtgctaaactgcttatccatgtgtcgttggagtttggagtacggatgcagtataaccaatgttccgtaaagttcacgagaaactactatgggcatggtatatctcctgtgattcttgtattggcaagacaagactcgtctttttacccaagaagggtccatagccccttttagacagtggcgtagctaaaatttagagtaaaggtggtccattatacaatttttattatattatctagcatatatactatagttttaatctcgatcaaatttttaggtggtccatagatcatagtgccacctagctagctacgccactgattttaggccttctattgctgggcctaatgggacaacgccatattagctcaggttttatcaccagacgctatgtataaggtgtgcacctgggcaggcatcaacacgtgtagccaaccgccgcaaactaatcaaacaatagaattaaccacagctgacgatgagcagtggcattatcaggcagttcatcaccggggcactccattttctgcactgtgtgattattagtacacacatgttcctaagatcctagtcacaattgagtgtgtttctgatttgattccatcggggagaaatgacgtaaagccaaggacgaaggacatcgctgctgttgaagcatagcttcgcctgcttggcatcacagtgacaagaatcacaatcatgctgtacgaatttaggcctgctggatactgacatgtggcgtaatagtggccaaaccattgggggccaaatgtcatgtcgacatacgagatcataactgtaccaacacacagcacaggcttagactatctccaacaggctaggcatagcgacacccaaacccaaaatatgtgctccaggctactgtagcggaaaaaaacagggtccaacagagtacccatactaaggacctattttgggttccagccgaggcggaacccaaaaatgagcgccctctctcctcgaccgaaacacctggcgcaactgtttcgcgggaggtggagagaagaggaaagcgcacctggccccggcaatagggaaagctccgccgccggcgagatctgctctgagctaggcttcgcaggtatggatctctctccaaccccaccctccttcatccctggtcccatctctcctctctctggacgtggatttggccgcggccgctcgcaccctagccaagggcgcatcacgctgcatgctgtgcctagccccgacgacgccgctcaaatttttgttgaccgcaccctccccagcatgtttgtgccatgtttaattgaatctctgttgtaataggatgatggataaaagtattggtggctcaagtgctcgcgctagcgaatctgaagaaatatttgggacagatcagtgggcttttgggttttctgccgctttgcattcttttgatgttcctccgaacccccaggtttattgcagccatgcatatgatgattttctttatttacatatctatacatcgatgattaacagttcttttcatcactagttcaacatgcatggctcgtcccaaatgtcatgcccacctataaatgagcaacctagccaggggctctccattgacaacaacattggctctgaggaccctccatcattgaaatcacagagggctgcaaagaagaagaaggtgtccaggagaggaattgcattcaccaaagaggaggacatggtggtgtgttcagcatttctgaatattagcaaagaccctattacaggtaatcatttgcaacatcttttatgaattctttgatgcccaaataacatggtggcataacatgcaggtgtgaatcaaacttcaagtggttattacaagaggatgcgtgattatttcaatgagcacaaacctgaagggtccaaccgtagccagattgctattcagcacaggtgggcattgattcagaaagcgataaacaagttctgtgggcacaaagcagctgttgataggctaaatgagagcggaaaaaatgagcaggatcgggtatactttcactcatattatcctccatctatctaatttacatatggttactttctaaccggtttaatctattttttttatagaaggtttaatctatattcatatttgcagatagatgatgctgtacaaatgtacgagaagacataaccttttaccttcatgcattgttggaaactacttcgcaacgaggccaaatggaacaataagtttcttgagctaaacaactctacatcacctgatcgaatggaacctccttcaactcaaggccatactgtagccggccatgcagaatctgggaatgagaatatagacacaacacggcctgagggtagggatagtgcgaagaggcgtagattgaagagctatgcagagacatcatcatctagtacaacagttgaagtcctccagcggttgcaggagaaatcagagaagaccgaactgaagcaagaccagcagatggttgaaatccttagtaggaaggacgaaaaaattaaaattcagagggatcttttcaaccttcagaagaagcatatgaagatgagtgtgaagcagcacaagaaggaaaatgagattagggagaagcagactgaggctcaactgatgtcagctgagtctagtattatgtccattgacattgagaaggtccccccttatctgaagaactattatctaggcatgcaacgacaaatcatggagcgcagaggattcagtagtcccttgaacaacggagactaa</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0660600, RefSeq:Os06g0660600