Os01g0778100

From RiceWiki
Revision as of 18:59, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0778100

Description

Protein of unknown function DUF966 family protein

Version

NM_001185659.1 GI:297720452 GeneID:9270515

Length

2357 bp

Definition

Oryza sativa Japonica Group Os01g0778100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34695983..34698339

Sequence Coding Region

34696254..34696285,34696481..34696623,34696715..34697229

Expression

GEO Profiles:Os01g0778100

Genome Context

<gbrowseImage1> name=NC_008394:34695983..34698339 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34695983..34698339 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggacaatttctcctggtcctacaaaaggaagtacaaggctgggtatatatggcaggacctgatgatggacgacgacctcatcacccccatctccgacaacgagtacgtgctcaagggctgcgacgtccggcgagccaccgaatcgccaaaggagaagtcgtcttctttagctgaagagccaaagaaactggacagtcaggaagtgaaggtcgcgtgcgatcagaagcaagtcgaggaggtgacgacgacgacggcgccagattccgacgagagatcgccgaagacgctgccgccggtcgacgaggactcgcccggcgagccggcgagccgtagtacggcgccgttgaagaaagacctgccacgaggccttcgcgaggagcggaagaagcagcagcgagaggtggtgaaagtggtctccaaggcggtggtggtgccggcgccggcgccggagcagaaggtgaaaggagcggcgagcggcaggatcagcagccacacgccgccggcggtgggcagcgcgcggaggatgcacctggcgcagctgctccacaacctcctgacgtgcggcgcggccgacgccgacgacaccgcgctccgccccgtcctgcggcacggcgccgacgacgacggcggcgactggcctcctacgccggtgtgccccggcatcgacggctgcggcctccggtga</cdnaseq>

Protein Sequence

<aaseq>MADNFSWSYKRKYKAGYIWQDLMMDDDLITPISDNEYVLKGCDV RRATESPKEKSSSLAEEPKKLDSQEVKVACDQKQVEEVTTTTAPDSDERSPKTLPPVD EDSPGEPASRSTAPLKKDLPRGLREERKKQQREVVKVVSKAVVVPAPAPEQKVKGAAS GRISSHTPPAVGSARRMHLAQLLHNLLTCGAADADDTALRPVLRHGADDDGGDWPPTP VCPGIDGCGLR</aaseq>

Gene Sequence

<dnaseqindica>272..303#499..641#733..1247#ggcggcggcggcggcgaggcgaggaggatcaacgtggtgtatttcttgagccgcggcggcaggacggaccacccgcacctcttccgcgtcaaccaccaccgcgccggcgtgcgcctccgcggtaagttcgtcccgtttcgccctttcgttcgatcgatctctcgcattcacgcggctcttcttcttcgtcttcttcttcttcatggtgtttatcgtgttgtcattggtttcagatgttaagaggtggctgtcggagctgcgcggccaggacatggcggacaatttctcctggtcctacaaaaggtaccgataatttcataacaggaaggcgattcatcaatcttgcccgccttatcgtcatcgtccatgatgatgatcacgcgtggttatattgttcggtgtttctttttgcgttaattcctaaatcatttttagcatgttcttgcttacccgatagatttagcaatttaggaatgtttataattgattcttgattaggaagtacaaggctgggtatatatggcaggacctgatgatggacgacgacctcatcacccccatctccgacaacgagtacgtgctcaagggctgcgacgtccggcgagccaccgaatcgccaaaggagaagtcgtcttctttaggtgcggtgatatttttttctggtcttctttttctcgttcgacgatgacgatggctcgtgattaacaaattcacaaaatttgtttgtgatagctgaagagccaaagaaactggacagtcaggaagtgaaggtcgcgtgcgatcagaagcaagtcgaggaggtgacgacgacgacggcgccagattccgacgagagatcgccgaagacgctgccgccggtcgacgaggactcgcccggcgagccggcgagccgtagtacggcgccgttgaagaaagacctgccacgaggccttcgcgaggagcggaagaagcagcagcgagaggtggtgaaagtggtctccaaggcggtggtggtgccggcgccggcgccggagcagaaggtgaaaggagcggcgagcggcaggatcagcagccacacgccgccggcggtgggcagcgcgcggaggatgcacctggcgcagctgctccacaacctcctgacgtgcggcgcggccgacgccgacgacaccgcgctccgccccgtcctgcggcacggcgccgacgacgacggcggcgactggcctcctacgccggtgtgccccggcatcgacggctgcggcctccggtgagtacggaaaccccacacaattcgatcatccgattacacagtgctcaaataggattatctggcgtgacagggtgggcaagaaggtgaaggtgcgaagaggcaggaaagacaaggcgaagccgaagcgagacggcggcgattcgcacaagccggcgagtttgccgcgttgctcgtgagtactcttgactagccagccccgtttcctctcaactgattttgctaccgcctgcacgtacgctgtccatctgtttctcgttcttgaccatttcttctgctcgtccaagaaccttgcgtggcagcttttcggttgggttgttgcagttgccacctattcaggctcgctgtgcgcaatgtgctagaccagtacggctataaacctcatgggccggcccatcaagataacaaaggctctcgttatcgagcagtctgaatagaaatttcatgggccggcccatcaagtgcagatttacgtctactttgaaaccccaaacaagctatcagcatccacacgactctgcttttttttttttctgaacaatcactttcttttccattgatcgtttataacctgtttaagaactgacttgtgaaatgttgtaacacacttctgcaggcagtgcgggaaggagttcaagccgcaggagctgcactcgcacatgcagtcgtgcagggtcttcagggagaagatgaggagcagcaccagctcccgggtcagcgtcgacaggggccggacctccgccgccgcgaggcccgaacaccggaggacgagaagcaagggcgccgccgccgccgccgccgcccccggcgacacctcggaccgaccgtccgccgtgctcctcctcagggactcatgatctgatgatcatttcgatcgaccttggagttcgtttgtgaattttgcagcacacgcttatatggcgtgcataatatttaacagcttatctaggatactgtacattgatctcctttgggtcaaaacttatagatcatgccatgatactgctcctaattgaatcctagctacgccaaatggttttttttcaggaatacgcaaaagaaaagaattgtgcacctttattatattaaaaggaataaaatttacatagacggc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0778100, RefSeq:Os01g0778100