Os01g0783800

From RiceWiki
Revision as of 19:00, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0783800

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001050992.1 GI:115440354 GeneID:4327060

Length

6084 bp

Definition

Oryza sativa Japonica Group Os01g0783800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34966077..34972160

Sequence Coding Region

34967227..34968514,34968616..34968723,34968834..34969021,34970873..34971083,34971187..34971424
,34971525..34971675,34971743..34972042

Expression

GEO Profiles:Os01g0783800

Genome Context

<gbrowseImage1> name=NC_008394:34966077..34972160 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34966077..34972160 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgtggaaaaggagctcttgcagggaagttattactttgctgattatgtctttgtggttagaaagatgtttaggaacagacagcatctctgcaaatgaaacacttccagatgggcagaccatagtgtccatgaaaaatgtgtttgtacttggtttctttagccctggagcttcaagtcatcgatatgttggtatatggtacagcaacccagtaaatagaacaatcgtatgggttgctaacaggaacgaaccactattagatgcttcaggagtccttatgtttgatgttaatggaaacctggtcattgcgcatggaggcagatcactcatagtggcttatggacaaggaaccaaagacatgaaagccacaatcctggattctggtaatcttgccctgagcagcatggctaacccatcaaggtatatatggcagagttttgattctcctactgatacatggctccctgaaatgaagattggactcaggacaacaaaccaaacactcatttcatggtcgagcattgatgacccagcaatgggggattacaaacttggaatggatcctgctgggctgtcacatcctgctgggctgtcacaattcattgtctggtggagagggaataatttttggaccagtggacactggagtggtgacatgttttctctcatcccagaactaaaattttttaccaccatcccaattttcttcaaatgtaacaattctaccaatgacatcacttgcacatactctgctaacccatccgataggatgacaaagattgttttgaattcaactggatcattaagcatcatgcagtttgattctcttgagaaatcatggattttgttatggagacagccaagtacttgtgaagttcataacctatgtggagcttttggtatatgcaatgacaatgatgcagtgcctaagtgttattgtacaaaaggatttgttccacaggacataatagcatatactaatgggtataccagggagggctgcaacaggcagaccaagctgcaatgtagcagtgacgagttctttgagattcctaatgtacggcttcctgataatagaaagaagctgcctgttatgggtcttagtgagtgcaaactggcatgtttgatgaactgctcttgtacagcttatgcttatttgcagttggatggatgcagcttgtggtatggtgatcttatgaacttgcaggatggttatgatgttcatggtgcaggaactctatgccttcgtctggcagcgtcagaagtagaatctggaagaaactcaggctcgggtcacaaaatgctttggatggcgtgtgtgattccacctgttgtagttctttccttttgctccctttcctttgttctttggagaagacggagtcaaaacaaaggtaaagaaaatttacatgctcaccactccttgatgactctggatacggacagtgcagtcaaactttgggagagtgaagaagcaggttctcagtttgtgctgttttccttctcccaaatagcaaattccaccaacaacttttcagctcaaaacaagcttggtgagggggggtttggtcctgtgtacaagggaaacttacctgataggcaggatattgctgtcaagaggcttgcaacaaattcgggacaagggttagttgaatttaagaatgaggtcctgctgatagcaaaacttcaacacgtaaatttggttaggcttttaggctgctgcatccaaggggaagaaaagatacttatctacgagtacatgccaaataaaagcttggatttcttcctctttgaaaaatcaagaagtgtggtattggactggagaaagcgaatacatataattgaaggaattgctcatggtcttctttatcttcacaaacattctagactgagaattattcatagggacttgaaagcaagcaacattctgttagacattgatatgaaccctaagatctctgattttggcttggcgagaatatttggctctaaagaaactcaagctaatacaaacagggttgttgggacatatggttacatggctcctgagtatgccatgcaaggcattttctcggttaagtctgatgtgtttagctttggggtgttgcttttggagatcgtcagcggaatgagaaatgcaggatcccaccgacgtgggcgctctcttaacctccttggtcatgcctgggagttatggagggaaggcagatggtttgatctcgttgatccatcaacacgtgatgcatatcctgagcatagggtactgagatgtgttcatgttggcctgatgtgcgtccaagagaacgctgttgatcgtcccactatgagcgatgtcatctcaatgcttactagcgaaagcatcaccttacctgatcctaggcagcctgctttcctctccattgtgcttccagccgaaatggatgcccatgatggatccttttctcaaaatgcaatgacaattactgatctggagggtagataa</cdnaseq>

Protein Sequence

<aaseq>MMWKRSSCREVITLLIMSLWLERCLGTDSISANETLPDGQTIVS MKNVFVLGFFSPGASSHRYVGIWYSNPVNRTIVWVANRNEPLLDASGVLMFDVNGNLV IAHGGRSLIVAYGQGTKDMKATILDSGNLALSSMANPSRYIWQSFDSPTDTWLPEMKI GLRTTNQTLISWSSIDDPAMGDYKLGMDPAGLSHPAGLSQFIVWWRGNNFWTSGHWSG DMFSLIPELKFFTTIPIFFKCNNSTNDITCTYSANPSDRMTKIVLNSTGSLSIMQFDS LEKSWILLWRQPSTCEVHNLCGAFGICNDNDAVPKCYCTKGFVPQDIIAYTNGYTREG CNRQTKLQCSSDEFFEIPNVRLPDNRKKLPVMGLSECKLACLMNCSCTAYAYLQLDGC SLWYGDLMNLQDGYDVHGAGTLCLRLAASEVESGRNSGSGHKMLWMACVIPPVVVLSF CSLSFVLWRRRSQNKGKENLHAHHSLMTLDTDSAVKLWESEEAGSQFVLFSFSQIANS TNNFSAQNKLGEGGFGPVYKGNLPDRQDIAVKRLATNSGQGLVEFKNEVLLIAKLQHV NLVRLLGCCIQGEEKILIYEYMPNKSLDFFLFEKSRSVVLDWRKRIHIIEGIAHGLLY LHKHSRLRIIHRDLKASNILLDIDMNPKISDFGLARIFGSKETQANTNRVVGTYGYMA PEYAMQGIFSVKSDVFSFGVLLLEIVSGMRNAGSHRRGRSLNLLGHAWELWREGRWFD LVDPSTRDAYPEHRVLRCVHVGLMCVQENAVDRPTMSDVISMLTSESITLPDPRQPAF LSIVLPAEMDAHDGSFSQNAMTITDLEGR</aaseq>

Gene Sequence

<dnaseqindica>1151..2438#2540..2647#2758..2945#4797..5007#5111..5348#5449..5599#5667..5966#aaggtccatcaaacgctgccccctgctgggaccggctcggccatggctcgtcggtggcggcggcggaggaggagaggaggaggaggaggaggtggaggaggaattgcaggtgaggtgatattctcacgcttaggacctagtgatgtcctactagcatcgttttatccaagcgccccttctcggtttcgtatcgtcttgtccgcgaggccagtgcctgcaagcctttcaagtgtcgtgaatgcttttggtttggtgaatcgctctaattgtttcccgtattcctgcagatcgaaaccggtgcactgtgcttgcaacaaaaattgtggctacagaactctgtcaatggaaggagtagggagatgctacaatagaaatgattttttttccttttttttttcagggatacaacagaaaggagttggtggaagagtgaaattggaatttattattctccaattattttctgtgaatctgttctcaaatgtagacaacatatcgtggggcagataaaccggtggaaattctctgtgccaccaatgatacaagtacttgagttgatggatagtcacttcccagtcaacacaggagaattggtttgatgctttgatgttgatggtaccaccatggagaatgcaagtaagaagaaaggtatttatgggttaatggtgccaccactgcgatcagaagagttcaaacagttagtcacatggtcaaaattcagctattgggccaaaagaactacatccattcttgacctagtcaataagcagcacttattcaatcaattattgtcttattgttgttcaatgtcatgtcatagattagtttccttggcatgtgttgaccgcaagtctgcaacgtagacttcacggtaaaacaccatatgaagttcaagctgacaactctcaatgtattgtccagagaagttttgttatttggaactgcggcgaaaggaatttccacgctttatttccaacctgtccttcggatgaatctagaggtgtgctaatatgcttgtattctttgcttattccttcatttcaatccctattcatcactttagttgtgtttttcttttctgttacttaaccgtctttcaaatacaatttgttttggttcaaaactagctgattggtcttttctgggagccatgatgtggaaaaggagctcttgcagggaagttattactttgctgattatgtctttgtggttagaaagatgtttaggaacagacagcatctctgcaaatgaaacacttccagatgggcagaccatagtgtccatgaaaaatgtgtttgtacttggtttctttagccctggagcttcaagtcatcgatatgttggtatatggtacagcaacccagtaaatagaacaatcgtatgggttgctaacaggaacgaaccactattagatgcttcaggagtccttatgtttgatgttaatggaaacctggtcattgcgcatggaggcagatcactcatagtggcttatggacaaggaaccaaagacatgaaagccacaatcctggattctggtaatcttgccctgagcagcatggctaacccatcaaggtatatatggcagagttttgattctcctactgatacatggctccctgaaatgaagattggactcaggacaacaaaccaaacactcatttcatggtcgagcattgatgacccagcaatgggggattacaaacttggaatggatcctgctgggctgtcacatcctgctgggctgtcacaattcattgtctggtggagagggaataatttttggaccagtggacactggagtggtgacatgttttctctcatcccagaactaaaattttttaccaccatcccaattttcttcaaatgtaacaattctaccaatgacatcacttgcacatactctgctaacccatccgataggatgacaaagattgttttgaattcaactggatcattaagcatcatgcagtttgattctcttgagaaatcatggattttgttatggagacagccaagtacttgtgaagttcataacctatgtggagcttttggtatatgcaatgacaatgatgcagtgcctaagtgttattgtacaaaaggatttgttccacaggacataatagcatatactaatgggtataccagggagggctgcaacaggcagaccaagctgcaatgtagcagtgacgagttctttgagattcctaatgtacggcttcctgataatagaaagaagctgcctgttatgggtcttagtgagtgcaaactggcatgtttgatgaactgctcttgtacagcttatgcttatttgcagttggatggatgcagcttgtggtatggtgatcttatgaacttgcaggatggttatgatgttcatggtgcaggaactctatgccttcgtctggcagcgtcagaagtagaatctggaagaaactcaggtaagtattgtatctgtagaaagactgcaagaattcagcatatatcatgaaaagtctcagttatctgcaagtagagttgtttatgatatcaaattctgtaggctcgggtcacaaaatgctttggatggcgtgtgtgattccacctgttgtagttctttccttttgctccctttcctttgttctttggagaagacggagtcaaaacaaaggtaccaatattaactcatcataactgcaaactgatgataaaaactgcatgcaataactatgcacagcaggtataacacatgaggaggattattttgttattgtgcatcaggtaaagaaaatttacatgctcaccactccttgatgactctggatacggacagtgcagtcaaactttgggagagtgaagaagcaggttctcagtttgtgctgttttccttctcccaaatagcaaattccaccaacaacttttcagctcaaaacaagcttggtgagggggggtttggtcctgtgtacaaggtaaccttttcttcaatttcgtactatctgacttattagctggcatgctgaagttagatttgtgtctggggcctctgggtttgcaatctacatctgcagattcagttttaagcaagcaacagtagtgaaggcccggtgaattgatgcctgggcttgcaatctacacctgcagatttagttttagccaagtaacagtagtgatgacccctaccaatataccacacaattcaataaatttggattttggagagctagaggaatggaatatataattattccaaccatgaagcctgagttcttttctattttaggggagacagatctgagtggaataatctttcgggaatatatttctttgttatgtacacaaaatgtacaagtggataaccaacccctgcttgacaagtcacatcaaataaaacctgtcgtagcacctctacttattacacaatggtattcgcaatagaactagcgctaacttgaggtgtagtggcttaggagtgttcccctcaaactcaagcatgcaaggcaacttttcaccataaacatctaatataactcgagttagattaaacatctaatataactcgagttaggaatgatcagtttgtttaaacatcacgagtttgcaagcacaacagagtttgttcaagccagtggtcaaagatggtagcctgtaagcttttcataattgatgttgtgaccaaagttcattgccccttttgttgggagggctataggggaatttaggtaggtgggtactactgaagcggtatggggcaaaagagcaattgagttggtgtcggaaaaaaaacaggtgagaatgagaaactagagggaaaggagttgttttttgtttggtgggggatgagtagtagggtggtgtgagaaacgcctaggggtcttccggctagctccacaaagtggtgggctagacgacctgggttcgaagcctcaccccttctaattatttgatattaagtccttccctaatattcgtgtctttttgagtagtagggtggtgtaatcacagtaaactttgcgaagttgactatgggcagtgacttaccaagttcagagcctcatgtctcttatgtcattaattaactagcaaaataaaaaaaatctacctaatccctgtgaagtatgcttattcgtccacttagccttcttagacctcgtctggatgggtctcaatccctggcgatccatggctgggattttgaactaaaaacctggcccttataacaaggtctcaagtgcataatcaggtattttatcccttgactgtgtaaggaggtaattttgcctctgtgtcaaataacatggctgacacattaccatcacgttatgttaaaaaataataaggtccacttgttaagttgtcagaggcaagcttaattccccttcaaaaattcctcggcaggacctactcatcactttgatatagagactgattgttaattaaaatatttttagttgccgagttggtcttaattgctccaaatcatgtcctgtgtgactgtcaaaaccgctcaacgtcactggccacgtgtcaaaaccatctccaaaacccagcccagaggattaaatagactttttcccataaacaaaacttgatacattagtttacaagattatttgcaataaattgtgtacagttgaacatatcaccctctttatttaatatcgatactcatttgtgcttcatgtcaagcaacagttatgctgtttttacaaatacatcttagatttaagagcatcaggccaccaaagtgcaagttctgtggcattcagttattttgccttgaaacagtctctacgatttaaccttttcgaaccattatccagggaaacttacctgataggcaggatattgctgtcaagaggcttgcaacaaattcgggacaagggttagttgaatttaagaatgaggtcctgctgatagcaaaacttcaacacgtaaatttggttaggcttttaggctgctgcatccaaggggaagaaaagatacttatctacgagtacatgccaaataaaagcttggatttcttcctctttggtgtgttctcttttcctttcttaatgtatgtcctttatcccccaccccttaccccttcccaatagctttctttaaataactagtttgttgtgtcttcttaaagaaaaatcaagaagtgtggtattggactggagaaagcgaatacatataattgaaggaattgctcatggtcttctttatcttcacaaacattctagactgagaattattcatagggacttgaaagcaagcaacattctgttagacattgatatgaaccctaagatctctgattttggcttggcgagaatatttggctctaaagaaactcaagctaatacaaacagggttgttgggacatagtaagtattgcctgcttcaaatttgcattcggcacatacactgaataggtgcattgacaaatggatgttgaattcactggactattgttttttttttcagtggttacatggctcctgagtatgccatgcaaggcattttctcggttaagtctgatgtgtttagctttggggtgttgcttttggagatcgtcagcggaatgagaaatgcaggatcccaccgacgtgggcgctctcttaacctccttggtcatgtcagtagtctctacatttctgaaacaatgtcacaaataaatagctagctgatactgaacttttcaggcctgggagttatggagggaaggcagatggtttgatctcgttgatccatcaacacgtgatgcatatcctgagcatagggtactgagatgtgttcatgttggcctgatgtgcgtccaagagaacgctgttgatcgtcccactatgagcgatgtcatctcaatgcttactagcgaaagcatcaccttacctgatcctaggcagcctgctttcctctccattgtgcttccagccgaaatggatgcccatgatggatccttttctcaaaatgcaatgacaattactgatctggagggtagataataatatcatgtccacctgtccagcatatgctgttcttaaagcttgatcaaatccatttggcataatgtattgtatgttcttacagctggacatgcttattgattgacagagaaaaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0783800, RefSeq:Os01g0783800