Os06g0663900

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Revision as of 09:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0663900| Description = Protein kinase-like domain containing protein| Version = NM_001064830.1 GI:115469391 GeneID:4341767| Length = 4921 b...")
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Gene Name

Os06g0663900

Description

Protein kinase-like domain containing protein

Version

NM_001064830.1 GI:115469391 GeneID:4341767

Length

4921 bp

Definition

Oryza sativa Japonica Group Os06g0663900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:28289684..28294604

Sequence Coding Region

28290162..28290186,28290393..28290440,28291295..28291930,28292394..28292648,28293106..28293260
,28293359..28293438,28293546..28293681,28293883..28294032,28294129..28294296

Expression

GEO Profiles:Os06g0663900

Genome Context

<gbrowseImage1> name=NC_008399:28289684..28294604 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:28289684..28294604 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtccatggcctccaacgaagaggtcggtaatgaagatgggaggcaggaggatctgcttgttaaggaagggccaggggagcaccaagaaaacaccatcagagattccgacgaagcgaaaaatgaggattgcagcaatagcgggtcagtaaccgaagccgtcgtatcaagcgaagaacccagtgacaggagcagcactgaagaacccagtgacaggagcagtactgaagaacccagtgacagtagtagtggtggtgacagtagcagccaatctgctgattctgatggaggtagcaaagaggcgcctaagatggattcgaaggccggtaacgatgacagcagcgagtgcaccgatcagagctctcctcgcgcggtgctagacatctcggtatccggtagtgtcgactccgatgagagctcctccgttgagcagccagcggagtcgaatcacaatacgcagtggaggaacctgatcagtggattgatactcaggaggaggaagtcgatggcgagagcggggacattccctcagagaaccaagaccacagggcttaagaggtacctggagaggatgcggagcggcaagaaccagatcgattgcggcgccattgctcctgagatccttcctgagatcagcaagtggaggccatcatggagaagcttcgactacagtgagctttgtgctgcaactgacaaattcagttcagaaaatttgatcggaaaaggcgggcatgctgaggtgtacaaaggacatcttgctgatggacaatttgtagcagtgaagagactaacaaaaggtggtaacaaagaggacaggattagcgatttcttatctgagcttggaataatagctcatgttaaccatccaaatgcggcacagctcttggggttcagtgtggaagggggcttgcacttggttcttcagttctcacctcatggaagcctggcttctgttcttcatggcacaaagggagccctcaagtggaaggctaggttcaatattgctcttggaattgctgaaggactgctttatctacatgaaggctgccatcgacgcataattcacagagacatcaaagcatcaaatatccttctaactgaagattaccaacctcagatctcagattttggacttgcaaagtggcttcctgacaaatggactcatcatgttgtgttccccattgaagggacattcgggtatatgtctccagagtatttcatgcacgggatcataaatgagaagactgatgtgtttgcatatggagttttgcttcttgaactagtgacaggacggaaagccgtggattcctccagacaaagcctagtaatatgggcaaaaccattgctcgactcgaacaacatgaaggaactagtggatccttctcttgatgttggatatgatccagaagaaatggctcacatcctagcagtggcatccatgtgcattcaccacagctcaagctcgcggcctagcatgaaatcggtggtccgtttcttgaagggggatagggaatcactcgaaatgatgcaaatgcaaagaccaaaactcatgaaacccctcatgttcgactccggcgattcagaggattatactcgctcaagttacctcaacgatctcgaccggcacaagaagcttgccttggagcagtga</cdnaseq>

Protein Sequence

<aaseq>MSSMASNEEVGNEDGRQEDLLVKEGPGEHQENTIRDSDEAKNED CSNSGSVTEAVVSSEEPSDRSSTEEPSDRSSTEEPSDSSSGGDSSSQSADSDGGSKEA PKMDSKAGNDDSSECTDQSSPRAVLDISVSGSVDSDESSSVEQPAESNHNTQWRNLIS GLILRRRKSMARAGTFPQRTKTTGLKRYLERMRSGKNQIDCGAIAPEILPEISKWRPS WRSFDYSELCAATDKFSSENLIGKGGHAEVYKGHLADGQFVAVKRLTKGGNKEDRISD FLSELGIIAHVNHPNAAQLLGFSVEGGLHLVLQFSPHGSLASVLHGTKGALKWKARFN IALGIAEGLLYLHEGCHRRIIHRDIKASNILLTEDYQPQISDFGLAKWLPDKWTHHVV FPIEGTFGYMSPEYFMHGIINEKTDVFAYGVLLLELVTGRKAVDSSRQSLVIWAKPLL DSNNMKELVDPSLDVGYDPEEMAHILAVASMCIHHSSSSRPSMKSVVRFLKGDRESLE MMQMQRPKLMKPLMFDSGDSEDYTRSSYLNDLDRHKKLALEQ</aaseq>

Gene Sequence

<dnaseqindica>479..503#710..757#1612..2247#2711..2965#3423..3577#3676..3755#3863..3998#4200..4349#4446..4613#gctctcattgcattgtctcctcttcctactgctgctgctgctttctctctctaggctgcttgctttgcttgcccctctctctctctctatctacaaatgttctcttcttttgagagaagagaggaatagctgcaacacaaaggaaggcactgcttgcactgtgcagtgtgcaggcacagccaagttttcaaaagaacccgccatcttctttctctctctactgtcctagcaattctctctctagctccagtattaatttctttccatcctccattttcttgggcaccgtgcgagcttagctctgcactgtttgcctcagttgggttggtttggtttggttgcttcttctctgcttcaacggttggtcgacttcaatgcaagaaagcatcggcagcaattgctcctcccgttgagtttttcgtcgtcgtttgaaagcgaaggagacggcgacggcgacgaggaggaggaggagggattaatgtcgtccatggcctccaacgaaggtattcttctcttctctctcaaatattctgtttctcgcatacaagtttgctcctcttttttctttcttcttctgctctcttctctcttcttcttctgtccgtcttggggaagagagagagagagagagagagagagagagaaattcagaagaagaaattgttggtgatgacgaaactgaaggagtatttggtgattgaatctgcagaggtcggtaatgaagatgggaggcaggaggatctgcttgttaaggaaggttagctgtggtgattttgattattttttttactgcttaatttcctcatctctttgctgcatgtgtggcacaattagtgcttgtctgtatcttctctttctttcttgctttagtctaagtgctccattagtcctggaaaaatcatggcttttttttccaggcatgctcacagctttgaagctctaacatgtcattttctaagagggcaacaagagattaaaaaaaagagagatgtcagctgctggattctggtcttctttgtaacttttaaatatgctattaggttgggcaggcttccattccctatcatcatatagaagatgggtagattgtcaagttcttccaatttttctcaccaaaccaaaatctttgaaatcgacatttatgttgatttaagcaccctcttgatgatctttcgcaaattgcaagcaaatcacagagatgcacaggttattttcagacttagttgtgtgtctgtctgtgtgtgatagatagaaagaaagcatcaattttggaagggtgcagagggtggtgcgcatgtcaattcttggtgcaaatctctgaattatagaaatgcctcagatactgtcgactggcagcatgtggttttcatgggaaacgagacaaacacaagcctctccccccttatcatccactgtcaagggatctgagagcctgtgtttgtgtgtgtgatgatgatgtgtttcttgccttgacttgctttgcactttgtttgtcttgatgtttgtagtagtaggtagttaatttgtcttcttgataaaattcagttttgtagcataacaaacctatgataatagcccatgctatgtctacatctcctttgctgtgttcagggccaggggagcaccaagaaaacaccatcagagattccgacgaagcgaaaaatgaggattgcagcaatagcgggtcagtaaccgaagccgtcgtatcaagcgaagaacccagtgacaggagcagcactgaagaacccagtgacaggagcagtactgaagaacccagtgacagtagtagtggtggtgacagtagcagccaatctgctgattctgatggaggtagcaaagaggcgcctaagatggattcgaaggccggtaacgatgacagcagcgagtgcaccgatcagagctctcctcgcgcggtgctagacatctcggtatccggtagtgtcgactccgatgagagctcctccgttgagcagccagcggagtcgaatcacaatacgcagtggaggaacctgatcagtggattgatactcaggaggaggaagtcgatggcgagagcggggacattccctcagagaaccaagaccacagggcttaagaggtacctggagaggatgcggagcggcaagaaccagatcgattgcggcgccattgctcctgagatccttcctgagatcagcaagtggaggccatcatggagaagcttcgactacagtgagctttgtgctgcaactgacaaattcagttcaggtgatatgcaaaacttacttctttgttgctgcaatgctgtcactcgattaggccatgttactatcattgcagaacttatgggatgtagctttaacactaagctatgaatttataactgcagcagtataatttcaccaaggaaacatagggcttgagattcaaatcatgaactgttatttagtgtaatgatgactgattactgattagaagttagaaaagtgagaagtattaaagtataagtgcataacactgtaataccaaatcattaacaaatagggcctgattttgttctacattgcggtaactctagcatataatacagaaatcttagctgttatgctctgcctctatatcatagctccaagggtcatgtgatacaaagtacagcttttggcctaattatattatcttcatctatgttaaatattctctgaatcttttgcttcatgcttgatattactagaaaatttgatcggaaaaggcgggcatgctgaggtgtacaaaggacatcttgctgatggacaatttgtagcagtgaagagactaacaaaaggtggtaacaaagaggacaggattagcgatttcttatctgagcttggaataatagctcatgttaaccatccaaatgcggcacagctcttggggttcagtgtggaagggggcttgcacttggttcttcagttctcacctcatggaagcctggcttctgttcttcatggtatggtttcctctaaatattctttacttaatgaatccaatttctgagagatatgctgcattgctgctatgtggtggcatgttacatcatatatcattttttagaaaagtaagaaatatatagaccttactattaggaatcaactagagaacagatatctcttgacattcatgctaccatgtagtacaacatattcatttaggcagtatctgaactatgaaatgtagttctccaataagtatgtgcgaatttgtgatttccattttggtaggcttcatacaaattttacattatcacttcttgtagccctcatttcaattgcctcttaaatgcatatactataggccgtatcacatatctgaactcaagcatcatcctctttctaaaaaaaaaatcaatataagagaatacttagaatacccttagtctggtgataaaatggagttcagctgaacaggcacaaagggagccctcaagtggaaggctaggttcaatattgctcttggaattgctgaaggactgctttatctacatgaaggctgccatcgacgcataattcacagagacatcaaagcatcaaatatccttctaactgaagattaccaacctcaggtatgtattctactaccagtctcttgccgtagtcctatctgttatatgattcctagggttcttttaaatgcaacagtttttactccctcattgcacagatctcagattttggacttgcaaagtggcttcctgacaaatggactcatcatgttgtgttccccattgaagggacattcgggtgagttcgataagtttttttcagtttcatcacaatgatttaatcgtacccagaaaaagaaacaatgccattgttggttttaacttagactttacaccctttcttaggtatatgtctccagagtatttcatgcacgggatcataaatgagaagactgatgtgtttgcatatggagttttgcttcttgaactagtgacaggacggaaagccgtggattcctccagacaaagcctagtaatatgggtaataaaagcaaatctctaatatgctccattatacaaaaattcaaatcagctcattttatatcattgtctggtcatattgagagaggcaagtgatgatcaaaagttaattctacaatacttgaatggataacatgaactggtataatcacatacatctgaagcccttgaattcacaagctgttgtttgtcatgtgcataggcaaaaccattgctcgactcgaacaacatgaaggaactagtggatccttctcttgatgttggatatgatccagaagaaatggctcacatcctagcagtggcatccatgtgcattcaccacagctcaagctcgcggcctagcatgaaatcggtgagtgcgatgaacacgctaactatacggccattgtaaaggctaaaaaagaaacaatttggattgtaaactgacctgttggtttgatgcctgtaggtggtccgtttcttgaagggggatagggaatcactcgaaatgatgcaaatgcaaagaccaaaactcatgaaacccctcatgttcgactccggcgattcagaggattatactcgctcaagttacctcaacgatctcgaccggcacaagaagcttgccttggagcagtgatacttgagttgattttgactgccatcttttgtacatcatcatcattatcaacattgtgatcctcctcctttccaaaggtgtagtagtatgcaggctgtatggatggatgtaagggttcagtttatcagttgctccctttgttgctgatcaccatggtgtcattttggccaaatgcatgttgtgataccattattcgatcgatggaccatttcagccctcgcctgtgtgttctatctctgcatgaaccttgttcaccatgtcaaacaaaaaaaaaaagctcctagatccaatcaagtaacctgaatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0663900, RefSeq:Os06g0663900