Os01g0793500

From RiceWiki
Revision as of 19:00, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0793500

Description

Conserved hypothetical protein

Version

NM_001051033.1 GI:115440436 GeneID:4324130

Length

4909 bp

Definition

Oryza sativa Japonica Group Os01g0793500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35365270..35370178

Sequence Coding Region

35365519..35365734,35365989..35366189,35367193..35367285,35367525..35367770,35368595..35368960
,35369047..35369187,35369758..35370114

Expression

GEO Profiles:Os01g0793500

Genome Context

<gbrowseImage1> name=NC_008394:35365270..35370178 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35365270..35370178 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaggagcctacaacctcaagctcctcgccgccctctccgcgctcgtcctcctcctcgccgcctcgcgccccttcctcccggggctcctggaggcggccctccgcgcccccgtcctcccgcgcgacctcctccctctcctgccctggccggtggcccagccgctgctccgccgcctcgcgctgcgcggcgccgccgacctcctcccgtccttcgtcggcgtcgcgcgggagccaggtgatggcggcgcccgcgccgccgagtggaagggcgcctgcttctacgataaccgggcgtggatggagttccacaacgggactgatgggggccttggaggtggtacgctccatctcgagacaaacaaagctcatagctggacttgcatagacctttatgtgtttgcaacaccatatcgtgttacatgggattactactttgtaggtcgtgagcatacccttgatttcaaagaatgggaaagcgaggctgaatatgaatatgtaaaacgcaaaggagtatccatattcctgatgccatctggaacaattggaacacttagagcactttgggatgttttccccctgtttacaaatactcaatggggtgagaattcaaatcttgcatttctaaagaagcatatgggtgcaaccttcgaggaacgtccgaaaccttgggtgtcagaattaaatgttgacgatatccactctggagattttttggttttatcaaaaattcgtgggcgctggggtggttttgaaaccctagagaagtgggttactggagcttatgctggccataccgcagtttgcctcagggattctgaaggaaagctttgggttggggaatctggtcatgagaatgaacagggagaagatattattgctatcttgccatgggaagaatggtgggactttgaagtaaaaaaggatgattccaatcctcagattgcattactacctttgcatccagatttgcgtgcaaaatttaatgagacagcagcttgggaatatgcaaaaagcatggatggaaaaccttatgggtaccacaatatgatttttagttggattgataccataagcgacaactatccaccgccattagatgctcatgtggttgcctctgtgatgactatgtggaacaaacttcaaccagagtatgctgccaacatgtggaaagaagcccttaacaaacggcttggaactaagggtcttgatctacctgaaatcatagtggaatcagagaagcgtgggatgacatttgacaaattgctaacagttcctgagcaagataagtgggtctatactgatggccagtctgcttcttgtgtggcttacgtccttatgatgtacaaggaggctggactctttgacccaattgccagctctatagaagttactgaattcaccataaaagatgcttacagcctcaacttttttgagaacaatatgacacggcttcccgtgtggtgcaacaaagatgacagtgtcaagctccccttctgccaaataaagggcaggtatcgaatggagttgcctggatacaacaccatgcagccgtaccctcacatgaatgaaaggtgtccttctctgcctccgaattataacagaccgcgaaattgctga</cdnaseq>

Protein Sequence

<aaseq>MGGAYNLKLLAALSALVLLLAASRPFLPGLLEAALRAPVLPRDL LPLLPWPVAQPLLRRLALRGAADLLPSFVGVAREPGDGGARAAEWKGACFYDNRAWME FHNGTDGGLGGGTLHLETNKAHSWTCIDLYVFATPYRVTWDYYFVGREHTLDFKEWES EAEYEYVKRKGVSIFLMPSGTIGTLRALWDVFPLFTNTQWGENSNLAFLKKHMGATFE ERPKPWVSELNVDDIHSGDFLVLSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGK LWVGESGHENEQGEDIIAILPWEEWWDFEVKKDDSNPQIALLPLHPDLRAKFNETAAW EYAKSMDGKPYGYHNMIFSWIDTISDNYPPPLDAHVVASVMTMWNKLQPEYAANMWKE ALNKRLGTKGLDLPEIIVESEKRGMTFDKLLTVPEQDKWVYTDGQSASCVAYVLMMYK EAGLFDPIASSIEVTEFTIKDAYSLNFFENNMTRLPVWCNKDDSVKLPFCQIKGRYRM ELPGYNTMQPYPHMNERCPSLPPNYNRPRNC</aaseq>

Gene Sequence

<dnaseqindica>4445..4660#3990..4190#2894..2986#2409..2654#1219..1584#992..1132#65..421#agcgcggggcaacgcgaaactcgcggagggctcccagacctaaccggcggcggtggcggcggccatgggaggagcctacaacctcaagctcctcgccgccctctccgcgctcgtcctcctcctcgccgcctcgcgccccttcctcccggggctcctggaggcggccctccgcgcccccgtcctcccgcgcgacctcctccctctcctgccctggccggtggcccagccgctgctccgccgcctcgcgctgcgcggcgccgccgacctcctcccgtccttcgtcggcgtcgcgcgggagccaggtgatggcggcgcccgcgccgccgagtggaagggcgcctgcttctacgataaccgggcgtggatggagttccacaacgggactgatgggggccttggaggtggtacgctccatctcgaggtgagtgccggtcccaagccccgcgtcccagtgttggctctgttactctgagccggaggcggtagaaccattcttcctccccaagggagggaggcaattggggatttgtggcttgtttgttgcagtctgctagtttcaaccctggacttgatcgtaattttgagattatcacctcgattgcgttcagttcagtgaaacatttaaatttagtcatgtagcttagtgtagatcgatcggtgccagagttgtttgtacagcgtactagatggtactagtagatggttcattcaaatatgttcgtttccctatttaggcatatcacaattcacaaaacttggctcatgcctaatcttagttagatcaatatgtggcatctaactggacatgcccactccagtatggtttctgctgtcttgcatgtggtttgtgattggattgaagtcagtaaccttttttcagagctttgtgatttcttaatacaagttaattgctttctgaaggttctcatttctctacacatgaatattcttcttatttcactattgatcctgacactgttccttgttgcagacaaacaaagctcatagctggacttgcatagacctttatgtgtttgcaacaccatatcgtgttacatgggattactactttgtaggtcgtgagcatacccttgatttcaaagaatgggaaagcgaggctgaatatgaatatgtaagtccccgctgcagctgcttttgtttgtaatcagcatttctgatcattgatacacatatgcatgatcttttaccttaacataggtaaaacgcaaaggagtatccatattcctgatgccatctggaacaattggaacacttagagcactttgggatgttttccccctgtttacaaatactcaatggggtgagaattcaaatcttgcatttctaaagaagcatatgggtgcaaccttcgaggaacgtccgaaaccttgggtgtcagaattaaatgttgacgatatccactctggagattttttggttttatcaaaaattcgtgggcgctggggtggttttgaaaccctagagaagtgggttactggagcttatgctggccataccgcagtttgcctcagggattctgaaggaaagctttgggttggggaatctggtcatgagaatgaacaggtagtggtcattaactgtgtaattttttttactcatttgaatatgacagattgactgcatgagactgtgaatatagaagaatggaagaaaagaaaagttccagcatcttaactatttttcgcaggatgcatgatagaccacttttggatagtaatagtcttatgtaattttggtctgcggttggataggagtaattgtgctctcgtgctttcattgttaatacctgtggctttgtacaatgataatttctttaacccaataatgattctttcaaatgtaacatggatattttagagtgaattacagcttgggctagcttttatcgacaaagtttcaatttgggccacccttcaccctttgttgcaatttagaccaccagtctcatatcaagcgcatcaatagccttaagcacatcggcacctgcatgccggtaatctcccccacttacacacgggccacatctttgccagaggagacactagattttgctagaaatgagagctggggtggttcatagtgcaaaaagggcaagattacccggtctgaagtgaaaagattgatggggggcgatcaaagtgaaactttggtaataaatggtggcccaaactgcaattcactcaatgttttatattcttgctctaacagaatgtattaacatcaaccattgaagatgaaacatgggacaccactgatatgtcagatgttgttctatacttctgtctggtttactagttatataccgtaggaaagctaatgtgatgtttcccttggcgtgaggcgtatttatttcagcaacagtaagctaacatgcattaatttttcagggagaagatattattgctatcttgccatgggaagaatggtgggactttgaagtaaaaaaggatgattccaatcctcagattgcattactacctttgcatccagatttgcgtgcaaaatttaatgagacagcagcttgggaatatgcaaaaagcatggatggaaaaccttatgggtaccacaatatgatttttagttggattgataccataagcgacaactatccaccgccattagatgctcatgtggtatgatcaatatcactttttgccaacagcattttgctaacgcttatattattaagtgtgctatatcttatcgccatatattttcataggctggttgcttagagttatagattattatatgctgcatacctagtggattaattttaataccagatatagcaaggattgcttgcaaggttgagctatgcatttgagatttatttgctgattgtagtaacaaaatcttacgattggcctaggttgcctctgtgatgactatgtggaacaaacttcaaccagagtatgctgccaacatgtggaaagaagcccttaacaaacggcttggaactaaggtttgtttcaattggcgcttgttatttgtttgattgtatttatttttcatggttcatcagcagctcagtgctctctgaagagtctttgggggttatattacctttcctcttgttctgttagttcaaatcaaacagttgcttcatcatgtttgggaatgaatgctggcataccgattagagtgagcagccagttgggacactttgaagctacagtaatctggatctgtagttcttttatctgatgctgtggaggaaatgcatggttttgtttgctactgctgctttctgagacataggctagagggggaagtatccggtgcaactatgcaactctcatcctacaccgttggatcaagaaatggacgtccaagattcgtccatgtcacctgagttaaaatttaactcacagattcactcatgagttaaaatttactgggagttaaattttaactcatgctgacgtggacgaatctcggacgtccatttctcgatccaacggtgtaggatgagagttgcatagttgcaccgaattaggtgattgcaccggatacttccccgtaggcagggggagagagcccagtccagctgtgtgggctctgtaatagaactgtactaaacgctcaagaaggaatgcagattcctaaaagtctataactaaatctgaagatttccttaagtggttccttcttctaaaactaccctcaattatttttgataagacgtagtctgcatgagaatttctcatttactcaagcgtcccctgggtatatataagggttatgacacaccaagggatcctattttatgatacggggattggcctgcaacagttgattagttagtaattctcttagttcttttgtcgcatatccaatttctaacagtggaaggtgctccatgctatgagtttctatatacacagaaaatcattgctttatagctccgttgtgctcaatgctatgagtttttctggatagacttataatggagctatcttcttcagggtcttgatctacctgaaatcatagtggaatcagagaagcgtgggatgacatttgacaaattgctaacagttcctgagcaagataagtgggtctatactgatggccagtctgcttcttgtgtggcttacgtccttatgatgtacaaggaggctggactctttgacccaattgccagctctatagaagttactgaattcaccgtaagtactcttgatttcttgtgtggtttatgcttaaattccggcttccatgagatctagggtaattcagacatcaccgatggaactatatcatatgctcagtaattgactcatagtggaaggctagtctaccagttggcatattgccattctgcactaccaaatgatttgaattatgaatatttcctgatcattattaattgcccgcatccaacttctggtaaaaaaatatgttctccttaaattccatgcagataaaagatgcttacagcctcaacttttttgagaacaatatgacacggcttcccgtgtggtgcaacaaagatgacagtgtcaagctccccttctgccaaataaagggcaggtatcgaatggagttgcctggatacaacaccatgcagccgtaccctcacatgaatgaaaggtgtccttctctgcctccgaattataacagaccgcgaaattgctgatctgttacacattattacgccttgcattttgatatatgctggcttttagtctgtactttagctgtacatatcactgtagtctgtaggtatgcaattgttttctttgttgttactacgaagcaacttccgcaaataaggaagattatgattgcgtgaatgtacagtaaatctctacccttgatgctacaggtgttacactgctgtagggttcacataactttcgtcatatagtaattgacaaatacatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0793500, RefSeq:Os01g0793500