Os09g0517200

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Revision as of 07:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0517200| Description = Disease resistance protein family protein| Version = NM_001070214.1 GI:115480170 GeneID:4347587| Length = 5045 bp| ...")
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Gene Name

Os09g0517200

Description

Disease resistance protein family protein

Version

NM_001070214.1 GI:115480170 GeneID:4347587

Length

5045 bp

Definition

Oryza sativa Japonica Group Os09g0517200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20816374..20821418

Sequence Coding Region

20816374..20816394,20816820..20818580,20820372..20821418

Expression

GEO Profiles:Os09g0517200

Genome Context

<gbrowseImage1> name=NC_008402:20816374..20821418 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20816374..20821418 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcaacggcggtgagcttggcgcggtcggtgctggacggcgtgctgaacagggcgggctccgccgtcgccgacgaggcggcgctgctgcttggcgtgcggcgggaggtggagttcatccgcgacgagctggacatgatgagatcattcctcaaggtggccacggcgaaccccgacgccgacgacaccgtgcggacgtgggtgaagcaggtgcgcgacctcgcctacgacgtcgaggactccctcctcgacttcgcgctcttcgccgacacgttgtcgtcgtcctcctcgtcgtcgtggtggctcccgtggcgcatcgccgagcgccaccgcgtcgcggcgaggatccgggagctgaaggcgagcgtcgaggagctcaaccagcgcttccttcggtaccgcatcgtcgtcgaacacccgcgcgcgtcgcgcggcggcggcgcctccgacgaccagcagcagcttcacgaccacgatgggcagtactactcggcggagctggcgttccaggagtcggacatcatcgggcgggcgagggagaaggcggaggtgacggcgctcgtcctctccggctgcggcggcggcgacgtcgtcggcggcggcgcgctgggggtggtgtcggtgtgggggatgggcgggatggggaagtcgtcgctggtgcggatggtgtacaacgacccggagctcctcgacgccttcgactgcgacgcgtgggtgacggtgccgcacccgctcgacagcgccgacgagttcgtgcggcggctgcggcgccacctcgccgtcggcaaggaccaggacgtgcacgcctacctccgggagaagcggtacgtgatcatcgtcgacgacctgcacagccgggaggagtgggagcacatctggccggtgctgcacgtcgacggcggcaagggcagccgcgtggtggtgacgacgcggcgggaggacgtcgcgcgccactgcgcggggctcgtgcgcgaggggcacggccatgtctacgagctcaggccgcttgggcgggaagagtcaaaggatctcttttgtcagaaggtctacaaatcaaccgagtacatattggagaaggaaatggaggatctagctggtcctatcttaaagagatgccgggggcttccactggccatatccactataggaggtctgttagccaatagacccaaaacaggcatagagtggataaagttggatgaacaccttggtgcagagctggagtcgtctgaccttcgtaacatcactaaagtgattgtttcaagttatgatggcttgccatattatttgaaatcaatattcttatacctcagtattttccccgagaatcatgagatcagatgcacccgcttgttgaggcgttggatggcagaagggttcatagcaaagaaccgtgatatgccggtggaggaagtggggcagcgtttctacaatgagctcatcaacagaagtatgatccaaccctccaagaagaggattagccccagcgtgagtgtggatcgctgtcgggttcacagcatggtgctacagatcatcctgtccaagtccattgaggagaaccaactcttcatcatcaagaaacactgcaatgaggttccacaaagtaagatacgccatctggtagtatccaggtggaaaaggagggatgagaggctagaaaatataaatttttcgtatgttcgatcactaacagtgtttggggattgccctgcttctctcatatctcctaaaatgcgtcttctgcgagttctggacctggaagattcacttaacctgaagaatgaagacctcaggcacgtaggagagcttcaccatctaaggtatctttgtttgagaggtacagagatatcaaagcttccatcttttcagaaccttcggtacctcgagacgctagacatccaagacacaaaggtgacacagctccctgatggaattgcaaaacttgagaagctacgctatcttcttgctggcgtcaacttctcaaaagagttgctgcacaaggtggaacagccggagacagataatcgcaaggccaaccagttgggcaacatgttatcatgcttatattgcaacagcagtgattattgcgggatttctagcttggatcgagttagtgtaagagctcctgagggagttgagaagctaagggatttgcacatgttgggtgtgatcaatgttggccatggcaatggagtggtagggaagattaagaagctgacaaacttgcgaaggttaggagtctcaggtgtccttaaggaagaagggcaggacttatgcaagtcaatagagaagctaagtcgtttgcagcggcttgagctgcgctctgattccctaaagtttcttgctgaaagtgaattcgcagcaccaaaacatcttctttcacttaggctatatggcaatctagtcaggttgcctaaatggattggttcactcaatgatctggcgaagctgaagctgctggggacacaattgaagcagggagaaatcatgcacctcgggaagctgcgcaacctagcatttctcggcttgtgggacaactcttatgtagggtattcactgcattttggtcctggcacattcccaaaactcaagttccttgacattgatgggctgaagaacattgaaacggtggcgatcgagaatggcgcgatgcctgagcttgaacaactctgggtgaacgactgcaaaggactacttgatagcaaagatggtttatcaggagtaccacatctgacaaacctgaatgagcttcttgtgaagaagtgtggtgagaaggagaacctgatggagatactgcaaacacagaatattttgtctggttggtga</cdnaseq>

Protein Sequence

<aaseq>MEATAVSLARSVLDGVLNRAGSAVADEAALLLGVRREVEFIRDE LDMMRSFLKVATANPDADDTVRTWVKQVRDLAYDVEDSLLDFALFADTLSSSSSSSWW LPWRIAERHRVAARIRELKASVEELNQRFLRYRIVVEHPRASRGGGASDDQQQLHDHD GQYYSAELAFQESDIIGRAREKAEVTALVLSGCGGGDVVGGGALGVVSVWGMGGMGKS SLVRMVYNDPELLDAFDCDAWVTVPHPLDSADEFVRRLRRHLAVGKDQDVHAYLREKR YVIIVDDLHSREEWEHIWPVLHVDGGKGSRVVVTTRREDVARHCAGLVREGHGHVYEL RPLGREESKDLFCQKVYKSTEYILEKEMEDLAGPILKRCRGLPLAISTIGGLLANRPK TGIEWIKLDEHLGAELESSDLRNITKVIVSSYDGLPYYLKSIFLYLSIFPENHEIRCT RLLRRWMAEGFIAKNRDMPVEEVGQRFYNELINRSMIQPSKKRISPSVSVDRCRVHSM VLQIILSKSIEENQLFIIKKHCNEVPQSKIRHLVVSRWKRRDERLENINFSYVRSLTV FGDCPASLISPKMRLLRVLDLEDSLNLKNEDLRHVGELHHLRYLCLRGTEISKLPSFQ NLRYLETLDIQDTKVTQLPDGIAKLEKLRYLLAGVNFSKELLHKVEQPETDNRKANQL GNMLSCLYCNSSDYCGISSLDRVSVRAPEGVEKLRDLHMLGVINVGHGNGVVGKIKKL TNLRRLGVSGVLKEEGQDLCKSIEKLSRLQRLELRSDSLKFLAESEFAAPKHLLSLRL YGNLVRLPKWIGSLNDLAKLKLLGTQLKQGEIMHLGKLRNLAFLGLWDNSYVGYSLHF GPGTFPKLKFLDIDGLKNIETVAIENGAMPELEQLWVNDCKGLLDSKDGLSGVPHLTN LNELLVKKCGEKENLMEILQTQNILSGW</aaseq>

Gene Sequence

<dnaseqindica>5025..5045#2839..4599#1..1047#atggaggcaacggcggtgagcttggcgcggtcggtgctggacggcgtgctgaacagggcgggctccgccgtcgccgacgaggcggcgctgctgcttggcgtgcggcgggaggtggagttcatccgcgacgagctggacatgatgagatcattcctcaaggtggccacggcgaaccccgacgccgacgacaccgtgcggacgtgggtgaagcaggtgcgcgacctcgcctacgacgtcgaggactccctcctcgacttcgcgctcttcgccgacacgttgtcgtcgtcctcctcgtcgtcgtggtggctcccgtggcgcatcgccgagcgccaccgcgtcgcggcgaggatccgggagctgaaggcgagcgtcgaggagctcaaccagcgcttccttcggtaccgcatcgtcgtcgaacacccgcgcgcgtcgcgcggcggcggcgcctccgacgaccagcagcagcttcacgaccacgatgggcagtactactcggcggagctggcgttccaggagtcggacatcatcgggcgggcgagggagaaggcggaggtgacggcgctcgtcctctccggctgcggcggcggcgacgtcgtcggcggcggcgcgctgggggtggtgtcggtgtgggggatgggcgggatggggaagtcgtcgctggtgcggatggtgtacaacgacccggagctcctcgacgccttcgactgcgacgcgtgggtgacggtgccgcacccgctcgacagcgccgacgagttcgtgcggcggctgcggcgccacctcgccgtcggcaaggaccaggacgtgcacgcctacctccgggagaagcggtacgtgatcatcgtcgacgacctgcacagccgggaggagtgggagcacatctggccggtgctgcacgtcgacggcggcaagggcagccgcgtggtggtgacgacgcggcgggaggacgtcgcgcgccactgcgcggggctcgtgcgcgaggggcacggccatgtctacgagctcaggccgcttgggcgggaagagtcaaaggatctcttttgtcagaaggtaccttcccttgaaaccttgaccgaccatttcagtcttctatgtcaacattttttagtacaagttcttgaaaaaaagtatttcaagtgaaatttcacaaaaaaataagaacatcacaaaagtacattttcgaacaattattatatttcttttcatatagtatatgacaggcgtcatataacacgtgtagttgtgtagttataccatgatagtttaaatcattactctctaaattgataatacttatcgttttgaataagtatgagatcaaactttaaaaaatcatctttccgtcaaaaaaacttaaaaatcttctactatgaataatctcttacaatatttgtctttgaaatatagagatcacatgtgtagaatagtcttataaatctttttagtaaaattatatactttttgcgggaaaaattatatactccctccgtccctaaatgtttgacgccgttgatttttttaaacatatttgaccgttcgtcttattcaaaaaaaatttagtaattattaattcttttcctatcatttgattcattgttaaatatatttttatgcgcatatatagttttacatatttcacaaaagtttttgaataagacgaatggtcaaacatgttaaaaaaagtcagcggcgtcaaacatttagggacggagggagtatatgtaaatatttccatatatagtgtaatagaaaatatgatatagttgttttttaatcgtatccttataaaaacaacaagtattattaacccagaagaagtaatagattaaaaacattagaatgtagtatgtgaattgatagattcatcataaaaaaacgccatcatattattgtttttttaatatgtaactaggaaaaacaatagtgtaaaaactgatgtatagcaaatacaaactggggttcgcaattcagactgatggaccaacccaccatccggcccataagcaggcagaggatttatccatcttctttagcccaagaaagcccgaactgtccatgcacacctcctttaaattaggcccaaatatcacccatcgggccaccggcgggagggccaagtggcggcggcgccccgggggggggggggggggggatacaagggaagcctacagtgccgccttcctgagtcctgcaagtctgcgatactgttagccactcacgcacgacaacagctgagacttcacagttcgacgccctcaacctgttcgatgaaattcctgcgtgaaatactagaagatatagtaggtgccaccagtgtccctccatggagcaccggcacatgcgactttgaaggtttgttttcttttttaattcccagtgttgatagcgtttgcatgcatgatggatgcactcaaccaacaagaatgtggcgtaatctactcgggttgcatttgttgctgggtgatacatactccagagaaatagaatgttttagacaatggtcgtttgcaaatgttttcaggttttttgcttttatagactaaagaatcttaatactgtgatctacatttatgcaataaataatgtgttgcaagaaaaaaaacaatcatatcattttcagtgagacctttatattagtaaatctatatattattaaataaagtgtgttattttgtaatttcaacatttatgagaaaactccaggaacattcctacattgaactactatggcatgttcacatgatggtttacaaattacaagaactggacctctaggtccttggcaattcaattgtacaatttgtagtacttatgtatcttttgcttctccatcatttgcaggtctacaaatcaaccgagtacatattggagaaggaaatggaggatctagctggtcctatcttaaagagatgccgggggcttccactggccatatccactataggaggtctgttagccaatagacccaaaacaggcatagagtggataaagttggatgaacaccttggtgcagagctggagtcgtctgaccttcgtaacatcactaaagtgattgtttcaagttatgatggcttgccatattatttgaaatcaatattcttatacctcagtattttccccgagaatcatgagatcagatgcacccgcttgttgaggcgttggatggcagaagggttcatagcaaagaaccgtgatatgccggtggaggaagtggggcagcgtttctacaatgagctcatcaacagaagtatgatccaaccctccaagaagaggattagccccagcgtgagtgtggatcgctgtcgggttcacagcatggtgctacagatcatcctgtccaagtccattgaggagaaccaactcttcatcatcaagaaacactgcaatgaggttccacaaagtaagatacgccatctggtagtatccaggtggaaaaggagggatgagaggctagaaaatataaatttttcgtatgttcgatcactaacagtgtttggggattgccctgcttctctcatatctcctaaaatgcgtcttctgcgagttctggacctggaagattcacttaacctgaagaatgaagacctcaggcacgtaggagagcttcaccatctaaggtatctttgtttgagaggtacagagatatcaaagcttccatcttttcagaaccttcggtacctcgagacgctagacatccaagacacaaaggtgacacagctccctgatggaattgcaaaacttgagaagctacgctatcttcttgctggcgtcaacttctcaaaagagttgctgcacaaggtggaacagccggagacagataatcgcaaggccaaccagttgggcaacatgttatcatgcttatattgcaacagcagtgattattgcgggatttctagcttggatcgagttagtgtaagagctcctgagggagttgagaagctaagggatttgcacatgttgggtgtgatcaatgttggccatggcaatggagtggtagggaagattaagaagctgacaaacttgcgaaggttaggagtctcaggtgtccttaaggaagaagggcaggacttatgcaagtcaatagagaagctaagtcgtttgcagcggcttgagctgcgctctgattccctaaagtttcttgctgaaagtgaattcgcagcaccaaaacatcttctttcacttaggctatatggcaatctagtcaggttgcctaaatggattggttcactcaatgatctggcgaagctgaagctgctggggacacaattgaagcagggagaaatcatgcacctcgggaagctgcgcaacctagcatttctcggcttgtgggacaactcttatgtagggtattcactgcattttggtcctggcacattcccaaaactcaagttccttgacattgatgggctgaagaacattgaaacggtggcgatcgagaatggcgcgatgcctgagcttgaacaactctgggtgaacgactgcaaaggactacttgatagcaaagatggtttatcaggagtaccacatctgacaaacctgaatgagcttcttgtgaagaagtgtggtgagaaggagaacctgatggagatactgcaaacacaggtcagcgaacacagtaaacgcccgaagttcctcattggtaaatccattgtaacaacaagccccaaacgacagcgaacagagtaaacctccgatgttcctctttggcaaatctatcttaacaaaccccaaacaacaatgagctacagacgatcgatgaaaaagaagaaatgtgattgatgatatatgatttttagtttctttttgtgttttacttgtatatatatgttgtatatagttcgtgctgtaatttgtaccttcttgtctctgagcttcatctcataaaagcactaatgatgatgccattttggtatagttatatagttggctcttaatcatctttatcatcagttcagcacttaagcatgtattagatgagacatcgtttggttcgttgaatgtgaatattttatgtgttttctatgcagaatattttgtctggttggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0517200, RefSeq:Os09g0517200