Os01g0805900

From RiceWiki
Revision as of 19:00, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0805900

Description

Tubulin beta-2 chain (Beta-2 tubulin)

Version

NM_001051100.1 GI:115440570 GeneID:4327550

Length

3801 bp

Definition

Oryza sativa Japonica Group Os01g0805900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35923791..35927591

Sequence Coding Region

35924749..35925142,35925850..35926119,35926532..35927211

Expression

GEO Profiles:Os01g0805900

Genome Context

<gbrowseImage1> name=NC_008394:35923791..35927591 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35923791..35927591 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagagagatcctgcacatccaaggcgggcaatgtggcaaccagatcggtgccaaattctgggaggtggtgtgtgatgagcatggcattgaccctaccgggcggtacacaggcaactcagatctgcagttggagcgtgtcaatgtgtactacaatgaggcctcctgcggtcgctttgtgcctcgtgctgttctcatggaccttgagcctggtactatggacagtgtccgcactggaccctatggccagatcttccgccctgacaactttgtgttcgggcaatctggtgctggtaacaactgggccaagggacactacactgagggtgccgagctaattgattctgttttagatgttgtgaggaaggaggctgagaactgtgactgcctgcaaggattccaagtatgccactctcttggtggtggtactggatctggtatgggtacacttttgatatcaaagatcagggaggagtaccctgaccgcatgatgctgacattctcagttttcccctcaccaaaagtatctgatactgtggttgagccatacaatgctacactctcagtccatcagttggttgagaatgctgatgagtgtatggttcttgataatgaggctctctacgacatttgcttcaggactctcaagctgaccacacctagctttggggatttgaaccatttgatttctgccaccatgagtggagtcacatgctgcctaaggttccctggtcagttgaactctgacctccgtaagctggcagtgaaccttatcccctttccccgtctccacttcttcatggtcggattcgccccgctgacatcacgtggctcccagcagtaccgtgcccttactgttcctgagctcacacagcagatgtgggatgccaagaacatgatgtgcgctgctgatcctcgccatggccgttacctcaccgcctctgccatgttccgtggaaagatgagcaccaaggaggttgatgagcagatgatcaatgtccagaacaagaactcatcctacttcgtcgagtggatccccaacaatgtgaagtccagtgtctgtgacattccaccgagaggcctctccatggcatcgaccttcattggcaactcaacatccatccaggagatgttccggagggtgagcgagcagttcactgctatgttcaggaggaaggctttcttgcactggtacactggcgaaggcatggacgagatggagttcaccgaggcagagagcaacatgaacgaccttgtctctgagtaccagcagtaccaggatgccaccgccgatgaggagggcgagtacgaggacgaggagcagcaggaggctgacgacatgtaa</cdnaseq>

Protein Sequence

<aaseq>MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWA KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP DRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR GSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQ NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRK AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGEYEDEEQQEADDM</aaseq>

Gene Sequence

<dnaseqindica>959..1352#2060..2329#2742..3421#tccacccacccctcgatctctcgctcgctcgccgccgatcggatcgcgtggttggatcatcacaactcgtaagaaaaatctcttcgactctctcgtgatgtatcggaggattgtagatctgttaggtttgggttcgagtcttcgagatgtgtttgtgatcggatccgttgttttggtgcgaattttggtggcataaattttgtttttcgaatgtttagggtatatttggtcgaggaaaccggtaatgtattgggatccgcggggattttcgccgatttcattgttccgtagaactgcgtagcccgtgaaatttagccccttgtagttttgttttggttggtttggtgaaaatgttggtaggccgcactggatctgtagaatttcgagtgctttatgccatctctatctcgtggatggctgggctgggataatgtagatacttgtggactttcttttttttttttgaaataagatacttgtggacttttgattttgggggatttcaactgggatatgtataagctattcctgcagttctgcttcactatgaggcatttcgagtgtatttagcttttagcctataaatccgatgccagaataccgatccatttttaggtggtctggtgtgtatgatgatgcatttagatggaccatcggtgattgaactgtgaagacactaggttttagccattttagcatacgaaactccagatctggctctgctcaacttgatctgtgaagaaattcagtgacatttcttatctagtagtagcacaacatgaatgattacttttcctgcttttatgggatgtttagatctgtcggctaagtaaattatactgtgcgaccacctcctttgtgctttgagtacttgagctgccattagcattgcttgttgtaagctcaatatctgtgattcactcaccagtgttgttccacttccctttgcagtgcaaagatgagagagatcctgcacatccaaggcgggcaatgtggcaaccagatcggtgccaaattctgggaggtggtgtgtgatgagcatggcattgaccctaccgggcggtacacaggcaactcagatctgcagttggagcgtgtcaatgtgtactacaatgaggcctcctgcggtcgctttgtgcctcgtgctgttctcatggaccttgagcctggtactatggacagtgtccgcactggaccctatggccagatcttccgccctgacaactttgtgttcgggcaatctggtgctggtaacaactgggccaagggacactacactgagggtgccgagctaattgattctgttttagatgttgtgaggaaggaggctgagaactgtgactgcctgcaaggtaaattggtaactaaatttctgatagttgctagataatttctttttaaattgattaggatgcagacgcttacttgaggttcatcctttaacatgctgtgaatctcgcaatatgatgcatggtagtgccatcatagaccatataagtaatgttgtaccaatgtagtgtatctatttgttagtatgaaacatattgcagatgagctattgtgacttattctttattggttcaaaggacattgattatccttgcaaattgtgtagtgccccaattgaatttatatccatggttccttgtcattttactatgcagttattcattgattttgtaccccgatgcaaatcatatcaatatttagatggttgtgtattctgataggtccctctgtctaaggtagcatgtgtgccatatgaatacatattcagcactattttacagtccatgcattagggtatgcacattcagcattctgttcttcaaattatttagtcaaccaaagactttgcacaacaagccttttatcagtgaaatgtccatgttagataatctagtgatcagcaacaattatatgattaaccctatttaagaaatttgtgcttataatgcactttgctcaacgaatgtactgtatttttttacatctgagcaaccatacttcattatattatgttgcaatcatttctaaagccctctacctctataatcaggattccaagtatgccactctcttggtggtggtactggatctggtatgggtacacttttgatatcaaagatcagggaggagtaccctgaccgcatgatgctgacattctcagttttcccctcaccaaaagtatctgatactgtggttgagccatacaatgctacactctcagtccatcagttggttgagaatgctgatgagtgtatggttcttgataatgaggctctctacgacatttgcttcaggactctcaagctgaccacacctagctgtaagctgcttcaacttttccagttttactgaatacaaactggtgcaacatttgtgtgtttgtaatcattatttgcatatacttggctatgcagatatacacattcttgttctagcagcttctctactacatgctaaacaatccgtcattatttttgcactataatctagaattaacaatacacttattcatagtcttgctgtttggtgtgtataactgtatataattatgaaaactacacttttagagcaggattcatgctaaacataaaggcgttgactccagttagtgatttgctttgtcatattgttgtttgtttggacatgttatatttttgttatcaacatatacccgcataattttcaaccattgcgccatataacattttccacatgtttgccattttatgcagttggggatttgaaccatttgatttctgccaccatgagtggagtcacatgctgcctaaggttccctggtcagttgaactctgacctccgtaagctggcagtgaaccttatcccctttccccgtctccacttcttcatggtcggattcgccccgctgacatcacgtggctcccagcagtaccgtgcccttactgttcctgagctcacacagcagatgtgggatgccaagaacatgatgtgcgctgctgatcctcgccatggccgttacctcaccgcctctgccatgttccgtggaaagatgagcaccaaggaggttgatgagcagatgatcaatgtccagaacaagaactcatcctacttcgtcgagtggatccccaacaatgtgaagtccagtgtctgtgacattccaccgagaggcctctccatggcatcgaccttcattggcaactcaacatccatccaggagatgttccggagggtgagcgagcagttcactgctatgttcaggaggaaggctttcttgcactggtacactggcgaaggcatggacgagatggagttcaccgaggcagagagcaacatgaacgaccttgtctctgagtaccagcagtaccaggatgccaccgccgatgaggagggcgagtacgaggacgaggagcagcaggaggctgacgacatgtaaggtggcttttgcttggtggttctagggcagggttttgtgtgcttggtgtttccgtcttacattatcaccgtattaccgcctcgtacgccaccgcccgcttcctatgtcttcgctttgttttttcgtctgtgctatgggaacctttttgggtactgtattacttgatgctggtctgcgattgttgatatttcggatgaattttacctttccgcgttggtcctcgtgtgcaatatttgcaaattacaaggaactaggaaggtagcccgcgcattcgcgtgggcatgtatcgtaggctgtatttgagataatcgtaagtaataggccgattgtgttaaaatgttgtatttgttatatagtaaactataggcatatagatctta</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0805900, RefSeq:Os01g0805900