Os01g0810000

From RiceWiki
Revision as of 19:00, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0810000

Description

Utp11 family protein

Version

NM_001051115.1 GI:115440600 GeneID:4327566

Length

3251 bp

Definition

Oryza sativa Japonica Group Os01g0810000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36165073..36168323

Sequence Coding Region

36165756..36165759,36165841..36165929,36166407..36166506,36166823..36166906,36167015..36167094
,36167202..36167295,36167384..36167475,36167923..36168013,36168205..36168260

Expression

GEO Profiles:Os01g0810000

Genome Context

<gbrowseImage1> name=NC_008394:36165073..36168323 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36165073..36168323 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcttcgctgcggaacgcgatccagcggcgcgctcacaaggagcgcgcccagccggagtcgaggaagaagttcgggcttctggagaagcacaaggactacatcgttcgggcgaaggctttccaccagaaggaggaaaccatcaggaaattgaaggagaaggcatcatttagaaaccctgatgagttctattttaagatgatcaacagcaagactgttgatggaattcataggcctaagcctgaagcaaacaagtatactgaagatgaactcatgctgctaaaaactaaagatatgggatacatccttcagggtattcagagtgaaaagaagaaaattgaaaaattaagctccatgcttcatgaactagacaacaagcgaccaaacaagcatgtttactttgctgaagacagagaagaggtcaaagaaatacaatctagaatagaacaaaagagcagttcacttggtttggacaacatcccttcccgtataaagaggaaaactgcttcgtcctatagggagttagaggagaggaaacagagggttcaaaagcttgagaaactgtatgcagacatggccttgcagaaagagttgaagaaacctggacggaaaagaaaactccgtgaggatgagattgagaatcaaacatcccggcctgtttataagtggcgagcacaacggaagcgatga</cdnaseq>

Protein Sequence

<aaseq>MSSLRNAIQRRAHKERAQPESRKKFGLLEKHKDYIVRAKAFHQK EETIRKLKEKASFRNPDEFYFKMINSKTVDGIHRPKPEANKYTEDELMLLKTKDMGYI LQGIQSEKKKIEKLSSMLHELDNKRPNKHVYFAEDREEVKEIQSRIEQKSSSLGLDNI PSRIKRKTASSYRELEERKQRVQKLEKLYADMALQKELKKPGRKRKLREDEIENQTSR PVYKWRAQRKR</aaseq>

Gene Sequence

<dnaseqindica>2565..2568#2395..2483#1818..1917#1418..1501#1230..1309#1029..1122#849..940#311..401#64..119#gcctgatccatcggaggaggacgacgaggaggaggtttgcgaggcagcggcagggagaggaagatgtcttcgctgcggaacgcgatccagcggcgcgctcacaaggagcgcgcccagccgtaagttcatctccacccactaacgcttcagacctcgagcctgctctgatcttgttcgattctgcatgccatggcgccgccgctgggtgcgcgggcgccacttgaagggattttcttatgcgctctgcggcagtttctgtgttgtgtgccggatttctggactgacctgggattgtggtggggtttgtcagggagtcgaggaagaagttcgggcttctggagaagcacaaggactacatcgttcgggcgaaggctttccaccagaaggaggaaaccatcagggtatggttctacacttgacgtttctggcgcttaggaaactcgggaaattagctacgttttaccagaactgcaagtgtttgcatgttactcctataaccatccaacattctattgtctcaattgtgtgtgctaagcgattttctgttttcaacgattctgtgagattgactagccgttccctgataatggagctatttattattgacatttagggggattttgggagatttgtatttgcttttaggaatattaggcaaattaaatcttagactttggatggtgtaagttaaagtttagtctcctctgtagggagacatcaccatatttgaacagttgaacagtttaggacgtaggggatacagaacattttcttctgtttgttgttatatttcttgcgattatgaatagtgcaactgtcctaacctatgtgttcctgcttaattacagaaattgaaggagaaggcatcatttagaaaccctgatgagttctattttaagatgatcaacagcaagactgttgatggaattcataggcctaagtatgtacagcttggttctttttgtagtttatggcttgaactactagtacttcgtgttttaattttaatttggactgtcatatacaaggcctgaagcaaacaagtatactgaagatgaactcatgctgctaaaaactaaagatatgggatacatccttcagggtattcagagtgaaaagaaggtttgtgatgatgttcagcatatttaaagcaaacaagtatactgaggaggaactcttcaggttaaatgatttattctatcctaattttgaatttgactccgttgtagaaaattgaaaaattaagctccatgcttcatgaactagacaacaagcgaccaaacaagcatgtttactttgctgaagacaggtacatgccactacattcatgttgagtttcaaatttgtcgttgccattttgaattgttagctagctaagcctatgtcaatgttgagttgaatatttgttttgtttcagagaagaggtcaaagaaatacaatctagaatagaacaaaagagcagttcacttggtttggacaacatcccttcccgtataaagaggtacatggcacttctatttggaacaaggttaattattagtattatactcatgaacaaccagttccacactttatctacttaatgaggtacttgttttcatcttttgttggaaaactacctttagttaatgaatgtacgtgtttttgtgtacgtgcatgtcctgttcaccactgatgtgcttgccataacgaaactacttagttgtaatgtttttgtgttgtatgagtttgtttctccagcttaaagaattaccatgtgcactttagtgcattgaccactacatgatgaacttatcctgccatcaaatcctttccaggaaaactgcttcgtcctatagggagttagaggagaggaaacagagggttcaaaagcttgagaaactgtatgcagacatggccttgcagaaagagttgaaggtattggatatctgtcattaaatagagttcttatctttgcataggtgtaagtctttctaagtactttggtgagttgaagtttacttagaatggtacaatgataagtggtaagaaactggattgaatgattgatgctggttgggtgcaaataaatgctaactgtttggatggaacttgctcactgtttggtatatagtcaattatgcatttttttgcagtttctcttaaataaaattagtgaagttcaatgtttgcacttaacatattgtgagttaagcaagtcagttgaacctgatcatatttcagaagcactataagcgtaaaatggcctgaatttagaatctgcaaagtattttgtgagattttttgagcaggtatttgatggtacaggatattctatgatcgcttctatttaaacttgattgaatatttatattgtttaactgttcaactactaacttttctaatttggggtagaaacctggacggaaaagaaaactccgtgaggatgagattgagaatcaaacatcccggcctgtttataagtggcgagcacaacggaagcggtaaggtacaattgctgtcttttgctcttacttccttgctgacctattgatttccacttaccgtcgttcatcgatcttcagatgatgtgaatggcttacaatggaatcattgagaatatatggagtaaccagtagatcctaaagcaaacggagactattgtttattttcttgaattctaatgcatttacatgtagcagtgcccctccacaaccgtctctcttcatagccttcacttgattgtatttgtggatccatgttggataccactttctgctacctgctactgatgtgatgtacctctgctttttacaaaatgttgggtaactacatcaacaattgagaacctaaacggtccgaatcttcacgcatcgtccgtaatcaacattccaaggttagcaagcacagtgccaccagaattagggcgtgttcactttgccggaaaaaaaacataccatttgatggtagagccaaatattagtaatgccattctttggtaaagtcaaaatatcaatgtgtcattggctttgataccttactaaattttggtgtaatttttgtgagtggaaggttccggaattaccaaattaccttactaaattttggtgtaatttttgtgagtgcaatcctatttgtttgttaccctaccaacaaaaatttgacaataccaaaatttagtaaggtttattctggtagtggagtgaacaagccactctttagtgtatgaagtatttgatatattctccagaaaaaaaggggttatgcacagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0810000, RefSeq:Os01g0810000