Os06g0666100

From RiceWiki
Revision as of 09:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0666100| Description = Protein of unknown function DUF597 family protein| Version = NM_001064842.1 GI:115469415 GeneID:4341780| Length = 43...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0666100

Description

Protein of unknown function DUF597 family protein

Version

NM_001064842.1 GI:115469415 GeneID:4341780

Length

4360 bp

Definition

Oryza sativa Japonica Group Os06g0666100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:28434241..28438600

Sequence Coding Region

28434387..28434557,28436966..28437040,28437136..28437276,28437799..28438197

Expression

GEO Profiles:Os06g0666100

Genome Context

<gbrowseImage1> name=NC_008399:28434241..28438600 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:28434241..28438600 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggatgaggcctggatgggtaggggggctcgtggaggagagcttcttcgttgggtgtcccgcccacgagagccgcaagaagaacgagaagaacatcttctgcctcggctgctgcgccagcatctgcccccactgcgccccctcccaccgccaccaccctctcctccaggttaggaggtatgtgtacaacgacgttgttcgcctggatgatctcgacaagctcatcgactgctcctttgttcagccatacacgatcaacagcgcaaaggtgatatttctgaagccaaggcctcagtcgaggccgttcaagggctctggcaacatctgcttgacatgtgacaggatcctgcaggagcccttccatttctgctgcctctcttgcaaggtggatcacgtgatgatgcagggcggcgacctctccaacatcctctacatgtccggcggctcctccggcgagcccgacctcgccgccggcttcccgcgcttcgagaacctccgcgtcgacggcggcggcggcggcggcggcggcctctccgacgacgacgacgaccaccaggtgaccacacccaactccatcctcgaagaccccctccaccaccaccaccaccagtactacggcggcggcggctccagcaacaacggccggagcacgtcgccggcgccaacgacggccgatgtcccgaggaagaagaagagcggcggcggcggcgggttcttcccccagatcgtgctgtcactgaacaacaggaggaagggcgccccacacaggtcgcctctcgcgtga</cdnaseq>

Protein Sequence

<aaseq>MGMRPGWVGGLVEESFFVGCPAHESRKKNEKNIFCLGCCASICP HCAPSHRHHPLLQVRRYVYNDVVRLDDLDKLIDCSFVQPYTINSAKVIFLKPRPQSRP FKGSGNICLTCDRILQEPFHFCCLSCKVDHVMMQGGDLSNILYMSGGSSGEPDLAAGF PRFENLRVDGGGGGGGGLSDDDDDHQVTTPNSILEDPLHHHHHQYYGGGGSSNNGRST SPAPTTADVPRKKKSGGGGGFFPQIVLSLNNRRKGAPHRSPLA</aaseq>

Gene Sequence

<dnaseqindica>147..317#2726..2800#2896..3036#3559..3957#tctttaatttctgttctcacctgtacatacatacatacgcacgcacgtacatacactcaatcagagagagattgttggtagctaggtagctgtggccaagaaagtgagagaattgggaggaggattggaggaagacgaaggggttgatggggatgaggcctggatgggtaggggggctcgtggaggagagcttcttcgttgggtgtcccgcccacgagagccgcaagaagaacgagaagaacatcttctgcctcggctgctgcgccagcatctgcccccactgcgccccctcccaccgccaccaccctctcctccaggtaatcaatccgccgtcttcgtcgccggcgccggcgccggcgacccaattgccatgccatgcatgtcctcgatacactgcatatatctctagctacatgcatcatatgatgcatgtctatcttcttcgttaattaattgcagtatcttaactgtattcagaatttcagattatgcatgtgatgtgagagtgtgttagtctgttgaaattcttcaattacaagtttatttatctgctttgaaatcgttgggggtgtgctacagtgtgctgaattgagtggatttgtgggggtgtgggctaggattttagcttttgcatgtatagcagctactagcttgtacttaacaaaaaagcactagctttggcctaattcactagcctttccgtcttggcttattccaagatttgcttctactagtaccagtagatgtgggcagctagaggatcttgttgattcttccatgtgccatgacatgctaattgtgtcattttcagaggaaagattgctaattgcctctcatcagcgaccatgctagtgtgccactaggagtactagtagcagtagtatttctagcataatttggttagatttggttgggcttaattgcggcggtgcttgggcttaagctgcatcgcatggggtgtctcacttaaccacttgcagctatagctctcgacccttttagaaccctgtgcccatctttcgtcttccccttgtcgttttccggccttcgttttgtgctccttgcaaagtgacccctcggttaatcaccctgattagtcacctaaatcacacattagtactttcacactgctaatcaccaccttaatttcttgcgtatttttctttgccaaacttaatttttcttcctgtccttggctgctgtttggtgggccatgagtagtagaaatgtggagtggttaaaattgggaagaagggtgaaaaatgagtctctctctggcaagaagttactgcgagcctcagtcccatacgcctgaaataaccatagtcttataattaagcctagtcccatcttacatcttccccattccggtgtgcaaagcatatgcaatgcattgctctctcttctcttctgttcacctcaccacctgcaaaagttacattttgcagcagcagcagcagcagcaaaggccagcacacacagtcatcacctctgatgaaaaaaggccatctctctttttgacagcggtaaacaaacaatagcccttgtgtcctgctctccattataattaaccagtaaaaacttctgatcaccacataaaatgaaccacttctttttgtcaaacttttataaaatttgtgtgtttccagagagagtctggtgcaactacaaaagctctaattcttaaatacatccaaactgcagcagtgagcaagattgatctattagcacaaaaatgggttgggttatccggattgtttagccatgaatagcaaagcatgccgatcttgatctctatccctgcaaagatagacggtgccggttggttgataaatggatgggcaatcctgtgtctatctagccatactagctacgatccatccatcgtctcagccaaagccagagctgttaagatcgcagctgcagtagtcacagtgacagaaactacaggctacagaccacagagaagccattggcgagatgcagtaaaaaaaaaagtgagcagtgtctctgtttttttttttaccatatgtgtgcttggtaaaagaccctgtcctcctaccaaacaaggccccaatactgttgctccggctctgtataatccaaggtcgccgtgacgatactgttcattcgttcaggcagtaacacacactctctatcttttttttacagtgtcatggggttaatttggaggtgtttttttttttacatttgtgacctcgggttgtgtgaccgagagaagtggaaggtgtaggggtggtatggtaaattagggtttgtttctccctcccacgatgtggatgacgacgagccgccggtcaaaggctcgcaattattaccgggggagtctatcctttccctgcctggctcagcgtccggatggaataatggaatttttttttacctcatcaacaattacaacttctagaagggtctcatctaaaatttgaatttggatggaataatggaataatggcctatgcttatcagctaaaatttaaatttttaaccttaaatttagagctgattttgagagttttttcatcgaagtttatttttcaaactttacttttatattgtctaaaacacgtatataaaagttatattcacaaattactttttgtttgcaaacgatgggtccgaagattcttttactagcactagaattaaacggtaccgtacgtataagtatactgtgcattgaagtgcttatacgtgtatataggttaggaggtatgtgtacaacgacgttgttcgcctggatgatctcgacaagctcatcgactgctcctttgttcaggtaaattgaacggcaataaaaactctgaaactaatctgttcagttttactattatgtagagctaattattaatgttggttctaatttgatttcagccatacacgatcaacagcgcaaaggtgatatttctgaagccaaggcctcagtcgaggccgttcaagggctctggcaacatctgcttgacatgtgacaggatcctgcaggagcccttccatttctgctgcctctcttgcaaggtacagtagtgtagtatagccactgtacacatcttccagaaaatttttttactgtcatggcgaattggcgatcgattgagaaatattaattaacgacacacaactctaatgataataaggttgggtttagatctaggatgactagttttagcgtgtcacatcgtagatgtacggacatgtatctgaagtatcaaacgtagactaataacaaaacaaattataaattgtgcatgtaaactgcgagacgaatttattaagcctaattaatttgttattagcaaatgtttattgtagtaccacattgttggatcatggagcaattagtattaaaagatttgtctcataattttcacgtaatctgtgtaattagtttttttttctatatttaatactctgtgtatgtatcaaacatttgagttcgatgtgacgggtgaaaaattttgtcacgagagatgtgagagtgagctactaactacaacgactgtgtgtcgttaattaatttgtgcatgcattggcatgcaggtggatcacgtgatgatgcagggcggcgacctctccaacatcctctacatgtccggcggctcctccggcgagcccgacctcgccgccggcttcccgcgcttcgagaacctccgcgtcgacggcggcggcggcggcggcggcggcctctccgacgacgacgacgaccaccaggtgaccacacccaactccatcctcgaagaccccctccaccaccaccaccaccagtactacggcggcggcggctccagcaacaacggccggagcacgtcgccggcgccaacgacggccgatgtcccgaggaagaagaagagcggcggcggcggcgggttcttcccccagatcgtgctgtcactgaacaacaggaggaagggcgccccacacaggtcgcctctcgcgtgatcatcatcagatcgtcacgtacgcgtaaaccgtgtttcgatcgctagtacagataatcatgaacacctccccctactattatataattagttgctctcattacctatcttaattgtaatccccttatgattattagtagcattgtagagagagaaagagagtgtgtgtgtggttgtggtgatggatgatggtgtggcctttggctggctagggtcaccatctttagggcaagcagtgttttgacgagatttgagagaggagagaaccagctaagcttgcaaactcctccctgttacaagactaggtaggcacggactttgtgggggcccctgtgcagggaccccaaaagattggctaccaattttgtacttgctgtaatgggggttaattaggtttgctcgct</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0666100, RefSeq:Os06g0666100