Os09g0517700

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Revision as of 07:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0517700| Description = Thioesterase superfamily domain containing protein| Version = NM_001070216.1 GI:115480174 GeneID:4347589| Length = 2...")
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Gene Name

Os09g0517700

Description

Thioesterase superfamily domain containing protein

Version

NM_001070216.1 GI:115480174 GeneID:4347589

Length

2935 bp

Definition

Oryza sativa Japonica Group Os09g0517700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20836980..20839914

Sequence Coding Region

20837187..20837330,20837447..20837575,20837769..20838256,20838374..20838551,20839332..20839901

Expression

GEO Profiles:Os09g0517700

Genome Context

<gbrowseImage1> name=NC_008402:20836980..20839914 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20836980..20839914 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgacgaggtcgaccgcgacggcggcgctcgcgctctccagaaccctcgcccgccgccccgccgcctcctcctcctctagaagaatctccctcgaactctccgccccgagaggcaccaatccattccaatccgccgcgttctcgtccaccaccaccggagatccgccgccgccgacgatggattcgccgatcaaggtggtgtcgcacatcggggggagcggtggggatgggggagggggagcgatcgacgcggggaggtcggcgaggaagccgctgagcctgtggcccgggatgtaccactcgccggtgaccaacgcgctgtgggaggcgcggtccagcatcttcgagcggatgatcgacgccggggccgcggggaagcagcagcagcagccaccgcagacggagctgctgacgaagacgcccgcggggagccggaccagcatcgtgtacaagttcgccaccgacgacatcctccgggagcagtacagggacccgtggaacgaggtgcgcatcggcaagctgctcgaggacctcgacgccctcgccggcaccatcgccgtcaagcactgttctgacgaagatagcacaacaaggccccttttgctggtgactgcttctgtagataagatggagctaaagaagccaatttgtgtggacactgatctgaagatagctggagctgttacttatgttggccgttcttcaattgatatacaaattgaagtgactcaagttgatcaagatagtgatatgcaatcagatccaatcgctctaacggctaacttcacgtttgttgcacgagattctatgactggaaagtctgctccagtgaaccgcctttcaccagaaactgaaaaggagaaacaactattcgcagagagggaagcaagggacaagctgagaaaaagaaagagagaagaacagaagggggtgtttgaaaatgggataaataagcttcatgttgaggctgagcgactaaatagtttactagcagagggccgtgttttctctgatttgcctgctttagctgatagagatagcatcttgctgaaagacactcgcctggagaactctcttatctgtcagcctcaacaacggaacttgcatggacgaatatttggaggtttcttgatgcaccgagcatttgagcttgccttctcaactgcatatgcctttgttgggcaaagaccttgctttcttgaagttgatcatgttgacttcttaaaaccagtggatgtaggagactttcttcgattcaagtcatgtgtcttgtatacccagctcgacaatgcagagcagcctctggtcaatgttgaagttgttgctcatgtaacaaggcctgagctccggaagagcgaggtttccaacacattccacttcaccttcaccgtctgcagcgatgcattgaagaacggactgaagatacgccatgttgttccctctactgaagaagaggcacggcgcatattagagcgcatggacgcagagggtttgttcgactag</cdnaseq>

Protein Sequence

<aaseq>MAATRSTATAALALSRTLARRPAASSSSRRISLELSAPRGTNPF QSAAFSSTTTGDPPPPTMDSPIKVVSHIGGSGGDGGGGAIDAGRSARKPLSLWPGMYH SPVTNALWEARSSIFERMIDAGAAGKQQQQPPQTELLTKTPAGSRTSIVYKFATDDIL REQYRDPWNEVRIGKLLEDLDALAGTIAVKHCSDEDSTTRPLLLVTASVDKMELKKPI CVDTDLKIAGAVTYVGRSSIDIQIEVTQVDQDSDMQSDPIALTANFTFVARDSMTGKS APVNRLSPETEKEKQLFAEREARDKLRKRKREEQKGVFENGINKLHVEAERLNSLLAE GRVFSDLPALADRDSILLKDTRLENSLICQPQQRNLHGRIFGGFLMHRAFELAFSTAY AFVGQRPCFLEVDHVDFLKPVDVGDFLRFKSCVLYTQLDNAEQPLVNVEVVAHVTRPE LRKSEVSNTFHFTFTVCSDALKNGLKIRHVVPSTEEEARRILERMDAEGLFD</aaseq>

Gene Sequence

<dnaseqindica>2585..2728#2340..2468#1659..2146#1364..1541#14..583#aacggattcgaccatggcggcgacgaggtcgaccgcgacggcggcgctcgcgctctccagaaccctcgcccgccgccccgccgcctcctcctcctctagaagaatctccctcgaactctccgccccgagaggcaccaatccattccaatccgccgcgttctcgtccaccaccaccggagatccgccgccgccgacgatggattcgccgatcaaggtggtgtcgcacatcggggggagcggtggggatgggggagggggagcgatcgacgcggggaggtcggcgaggaagccgctgagcctgtggcccgggatgtaccactcgccggtgaccaacgcgctgtgggaggcgcggtccagcatcttcgagcggatgatcgacgccggggccgcggggaagcagcagcagcagccaccgcagacggagctgctgacgaagacgcccgcggggagccggaccagcatcgtgtacaagttcgccaccgacgacatcctccgggagcagtacagggacccgtggaacgaggtgcgcatcggcaagctgctcgaggacctcgacgccctcgccggcaccatcgccgtcaaggtactctgcaattgctccatctctctctattgtgtggatcgtatctgtgtgacctgcactcgcttggtggatgtgatcatgtgccattacaagttacaaaaacaaaaatgaaatcactactctagcatggaattagcaattgaatctagatgtgaattggcgagagagaattgggagtttgagacaagggactttacaattgtcctgttcatgacttataagttttttttagacagagagataagcctgccccatttttctactatgagaaatggcagctacatagtttgagttcaaaccaaaactcataagtattgctaatcgctgataatgctctaagtatcctgttcataagtactatgttgtatttggtaaaaatatctatttgtgaaccgaggggataatagctgagatatgtttcctcccaatcctaatgttatatttggaaccagcatgaagtttcactatgtagataataacactgaataatgatggtactagactgacagttggtagtttggtactggtctacctgaagcagcagaggttaccctacattctcattgcacacctagccctatgccgccgactagttcagtctcttgttgctaacattcatttcatacatccaggttagcaaaataattctacctatggatgatagaattatagctcttacttttattcattttgagttttacatggtatattgaggcagcatccttttttacttgtaattggcatctttttgaaaaatcttatttggggtttggcatgcagcactgttctgacgaagatagcacaacaaggccccttttgctggtgactgcttctgtagataagatggagctaaagaagccaatttgtgtggacactgatctgaagatagctggagctgttacttatgttggccgttcttcaattgatatacaaattgaagtgactcaagttgatcaaggtagttttggtaaagcagtattgccagcttatttatttgtgttttttatactacttagtataatttattctgttctattttaactgacttattttaaatgatgctatcttgctacagatagtgatatgcaatcagatccaatcgctctaacggctaacttcacgtttgttgcacgagattctatgactggaaagtctgctccagtgaaccgcctttcaccagaaactgaaaaggagaaacaactattcgcagagagggaagcaagggacaagctgagaaaaagaaagagagaagaacagaagggggtgtttgaaaatgggataaataagcttcatgttgaggctgagcgactaaatagtttactagcagagggccgtgttttctctgatttgcctgctttagctgatagagatagcatcttgctgaaagacactcgcctggagaactctcttatctgtcagcctcaacaacggaacttgcatggacgaatatttggaggtttcttgatgcaccgagcatttgagcttgccttctcaactgcatatgcctttgttgggcaaagaccttgctttcttgaagttgatcatgttgacttcttaaaaccagtaagtagctagcatattcttttttgatagttctgtgtaatttagccctatctagagtgaactgagccgccaatttatagttagcttgcatcatgaaatcttggcttctctaatttgcacaatcagatcattttatgaattgaagattcctttggatgacagtaataaccatgtcactattatgcttgcacaggtggatgtaggagactttcttcgattcaagtcatgtgtcttgtatacccagctcgacaatgcagagcagcctctggtcaatgttgaagttgttgctcatgtaacaaggcctgagctccggaagagcgaggtatatccattactgctttgattgcatcagttatacggccatgcttccttcggtgccttaagttcttgctgtgattgtcagtgtactggtttgctaactgttttatctgcgtacaggtttccaacacattccacttcaccttcaccgtctgcagcgatgcattgaagaacggactgaagatacgccatgttgttccctctactgaagaagaggcacggcgcatattagagcgcatggacgcagagggtttgttcgactagtcctgcagaaccgcttgtttcagccacatgtctttttttttttactgatcaacgtcagctaatgggaaatgtaaagatgatttaaataacatcagataagtagtagcatgctggcaatatagcggcaaaatgctagttatatgattacttttgcaattccttttgcagacatttgggggtatataataaacataaacctcgagactc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0517700, RefSeq:Os09g0517700