Os06g0670300

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Revision as of 09:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0670300| Description = Homeodomain-like containing protein| Version = NM_001064863.1 GI:115469457 GeneID:4341803| Length = 3120 bp| Defini...")
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Gene Name

Os06g0670300

Description

Homeodomain-like containing protein

Version

NM_001064863.1 GI:115469457 GeneID:4341803

Length

3120 bp

Definition

Oryza sativa Japonica Group Os06g0670300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:28654558..28657677

Sequence Coding Region

28654779..28654902,28655884..28655960,28656124..28656317,28656434..28656521,28656971..28657258

Expression

GEO Profiles:Os06g0670300

Genome Context

<gbrowseImage1> name=NC_008399:28654558..28657677 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:28654558..28657677 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggagggtttgagaggagaggagttcggcagtacaaccggtccgaggtgccacggatgcggtggacggaggagatgcaccggcagttcgtcgaggccgtcgagtgcctcggcggccaggacgaagcaacaccgaagcgaattcttcagttgatgggcgtgaagggagttagcatctctcatatcaagagccatcttcagatgtacagatcaggctctagcaacagcaatcatcctgtcagcctccagaagttgacatcagctactgttaacaacattagcaaacgtgagtttgtgaatagtgaagatcgctgcatttacgcgtcaggggatagaaacactgcatcttcagacaagaatacttacaccatactccgctgcggccgctcatcaatgccatcaatagaagaaatattcagaaactgggaacaaaccagagggcgtcttcttccatggaactccaacgtgattacaacagaacaggcaacgactagagcaagtcgtcagactactaactacagtaagcctctgaagcagctgacagactgcgacctgacgctgtcgatcgggcagctgtgggacgacgccgccggcagcgacgccgacggctccagcacgatcagcgaggaggtcgccgcgccgtcgagggacgaagcgttcgtctcttcggccgatgaccacttcgccgccgccgccgcgaagaaggagagcaatatgctgaccactgatctgaacctggacctgaccatttcatcttcttggctgtcctga</cdnaseq>

Protein Sequence

<aaseq>MGGFERRGVRQYNRSEVPRMRWTEEMHRQFVEAVECLGGQDEAT PKRILQLMGVKGVSISHIKSHLQMYRSGSSNSNHPVSLQKLTSATVNNISKREFVNSE DRCIYASGDRNTASSDKNTYTILRCGRSSMPSIEEIFRNWEQTRGRLLPWNSNVITTE QATTRASRQTTNYSKPLKQLTDCDLTLSIGQLWDDAAGSDADGSSTISEEVAAPSRDE AFVSSADDHFAAAAAKKESNMLTTDLNLDLTISSSWLS</aaseq>

Gene Sequence

<dnaseqindica>222..345#1327..1403#1567..1760#1877..1964#2414..2701#atatatcatcatcaccatctttatctccctctctctctctccctctctgcatatatatagctacttcgatctctttgtagcaaccatcagttagctagctagcttgaggtagctagcgcttgtatttatcagaagcttagagataattttcagaagcttagagagctatcttagctacaaggaattaccggccaatcgacggcgagatcgatcgattgatcatgggagggtttgagaggagaggagttcggcagtacaaccggtccgaggtgccacggatgcggtggacggaggagatgcaccggcagttcgtcgaggccgtcgagtgcctcggcggccaggacggtgagtttgaaacaccaaccatggatatgcatgtttggtattgatcaattcaagctatatgagcagattgatcatgcaattgcttaattattgcatggacatggagttcgctttgatgatcaaattaattgggattttaatttgctaggtatagatcgagctatcatgtttttcaagggaactgattaaacgaagtgctttcttgttctttttgttttttggtttagaaagtttggtctccttaattattagttggtgtcggttaggcaggagtttgaaaacgaacacagcgtagcaggagtatagttaaagaaaaataaagacacgtgatattatatgtgcatatgcacgatgaacacccacggcccgttctcttttggattttctacggataattaagactgaattaagcatacaatttaataagagttaattagttagatggaatatcattagcacaataatttatcaattggagccactttcatcctcgactagctagatatatatctttttccaaaattaaattaatatatgttcttcttgacgattttttatttttagttttcatctgaaagtaatttagatcaagtactttagatatttttacactctttttctacctttaatcgtgcatatatttgtaccttgagtactaacagccattttcgtatgtactcagcctgaagtactgatcagttattatcatttgcaaactaaaatatttcaaaagtttcaagtactatctcatttgaacattaccgtaattaattattgtgtgctttatccagcacggtccggccatacgaagctgaacgtactatcgattttctctatccttgagggagacataatataatttttggtctcatgatacatgcatggaccatggaataacagtactgcatcatgatgatatttgtttgtagatcattcttcagaagtgctgataatttatctcctctcgcttttgtctgacagaagcaacaccgaagcgaattcttcagttgatgggcgtgaagggagttagcatctctcatatcaagagccatcttcaggtaattttgtagacccaggacttaccttttcagatttgtatgctaataatatacatgcatatgtatatatgcagcatatgctctttagatttgtatgctaatattagctagagatttgatccgtggctcaacctcttttttctctctcttaaataatggtcagatgtacagatcaggctctagcaacagcaatcatcctgtcagcctccagaagttgacatcagctactgttaacaacattagcaaacgtgagtttgtgaatagtgaagatcgctgcatttacgcgtcaggggatagaaacactgcatcttcagacaagaatacttacaccatactccgctgcggccgctcatcaatgtgagtgtgagagagagttaattagtcatttttcaattaatgttaattccaagtacatatgtgtgttatgaatttttcattttattcaatatattgatttttatacccacttgcaggccatcaatagaagaaatattcagaaactgggaacaaaccagagggcgtcttcttccatggaactccaacgtgattacaacagaacaggtgcctttcccctcactggaagctacgcctcaaataatatcacttaattgcatatatataatttgcattttcgttggacatctgtctgaatttttagcatgtatacatcttggtgtatatcctgtattccattcatgtagagagataggaaaaagctatggacaaatgcagacgtattttacttaaagaatccatcttccatatatgtagtattccctagaagtttttgttttggaaacatgcattaggtggcaggctgccaaactagcaaaccatactgccgtgtattgactgttcattcctgcttctgcatgcatggtcgaaaccatgaactatctagactatctctgaaacacttaattacaaatttaaaatccatatatacatttttcagcaagcttattaacactgaaacgtagattaattaacatatgtatatatctttgcaggcaacgactagagcaagtcgtcagactactaactacagtaagcctctgaagcagctgacagactgcgacctgacgctgtcgatcgggcagctgtgggacgacgccgccggcagcgacgccgacggctccagcacgatcagcgaggaggtcgccgcgccgtcgagggacgaagcgttcgtctcttcggccgatgaccacttcgccgccgccgccgcgaagaaggagagcaatatgctgaccactgatctgaacctggacctgaccatttcatcttcttggctgtcctgatcatatgatcattcagttgatgggcctgtgtatagctgcattatatttgtgcatatatgtagtagtatgtgtacaaaaataacgcggagagagagagcgtcaggctagtagtatttgcaggttacctgatgagatgatcttagagagtgtagtaatattctggagatttctttaggattattttcttatggtcagacacagcattttattaggtttttcagtagcgcatgcacgcgtttatctgtatagttttctttctattattaattgttcgttcgattagagaccggggacttcagacgaagacgggtgagaaattttgacagtttttgcttctcttgggtagacttctctgttgaatttctcacctttcatcatctgggcagttcccctatttctgatcgaattgtttgcgcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0670300, RefSeq:Os06g0670300