Os01g0851100

From RiceWiki
Revision as of 19:02, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0851100

Description

Similar to Axi 1 (Auxin-independent growth promoter)-like protein

Version

NM_001051354.1 GI:115441078 GeneID:4324806

Length

4442 bp

Definition

Oryza sativa Japonica Group Os01g0851100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38399424..38403865

Sequence Coding Region

38399957..38400161,38400231..38400707,38400805..38401130

Expression

GEO Profiles:Os01g0851100

Genome Context

<gbrowseImage1> name=NC_008394:38399424..38403865 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:38399424..38403865 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaccaatcactcaagtgggcatcaaagttatttagaaaaagacataatatactgcagtcgaagagttatgaactgctagttacttttctgcaggcttcttactacagagctttctcaaggacactgaagaaggccaaagttgtgaaattcacacatacagattcacgaattgttaacaatggtcttcccccatccatccaacgactccgttgtcgggcaaattatgaggcactaagattccacaaagaaattgaagagctgagtactgctctagtagatagactgaggaatggatccaatcattatatcgcacttcacttaaggtatgagaaggacatgctctcatttactggttgcagccacaacctaacacataaagaggcagatgagctgagagaaatgagactcaacgtgcggcactggaaagagaaggaaatcaacagtagggagaggagactccaaggacgctgccctatgactcctcgtgaagtagctcttttcctcaaagctatgggctatccttccagcacaaagatctatattgtagcaggtgaaatatatggtggacatagcatggattcattaaaggctgaatatccaaacatatatacacattatagtctggcaacggtagatgagttagagcctttcaagctataccaaaacagattagctgccttggactataatgtagccgtccaaagtgatgtttttgtgtatacgtatgatggaaatatggctaaagcagtacagggtcacagaagatttgaaggattccaaaaaaccatcaacccagacaggcagaagcttgtgggactcattgacaagcttgatgaaggtacactaacatggaatgagttccaaagtgaagtgaagatacatcatgaaaacagacttgggggtccatatcagaggttatctggtcgaagtcctaggcaagaggagtacttctacgcaaatccccttccaggctgcttgtgcaaaagaatgcaaaggattaaatga</cdnaseq>

Protein Sequence

<aaseq>MDQSLKWASKLFRKRHNILQSKSYELLVTFLQASYYRAFSRTLK KAKVVKFTHTDSRIVNNGLPPSIQRLRCRANYEALRFHKEIEELSTALVDRLRNGSNH YIALHLRYEKDMLSFTGCSHNLTHKEADELREMRLNVRHWKEKEINSRERRLQGRCPM TPREVALFLKAMGYPSSTKIYIVAGEIYGGHSMDSLKAEYPNIYTHYSLATVDELEPF KLYQNRLAALDYNVAVQSDVFVYTYDGNMAKAVQGHRRFEGFQKTINPDRQKLVGLID KLDEGTLTWNEFQSEVKIHHENRLGGPYQRLSGRSPRQEEYFYANPLPGCLCKRMQRI K</aaseq>

Gene Sequence

<dnaseqindica>3705..3909#3159..3635#2736..3061#agcgaacgtgcgcgcgtgcgtgtgcaacggcggcccaaggcgcaaacgcgaacgcctcaatctttccacttcgttccacctctcctccgtgcaaaatccccagcgcgcacgcctcgtccccctacgtgccgcgggcgtggttgcacgtcgtacgtacgcaggcgtcctcgcgagggcgcgcacgcaggtgcgagctcgtggcgggtgacgaagcggtgaaggcaaggcatcgcggcggctgtttgatccggggcctctttttgctccccgtgatcaggtattcgggtgctatacttaggtctggcaaaagtcagccgggccgcgcgcggtttggccatggctgcggcgccgccgtccgtggcgtcgtcgtcgtcgtcgtccagccccgtcctgtcggccgcgcaccgccgccggctcaacgacgtcgagcgagacgcgttcgactacggcggcccgtgcgacgtcgacgtcgatcatgatgacgacgacggcggcggcggagtgcgccgcgggcacggcgccggcgtggcgggtgtcagggcgctgttctcgtcggccaggaggagcaagagggcgtccgtgattatcgatcaggcatggctgcggaacgtggtcgcgtgcctgctcggcctcaccgtcgtcgccgggctcgtgctgagctcgcaccgagtgagcggcgccggcggcgggaggctcgtgcagaggatggacctcggtgacggcgaagtgatgggctggacggaggagaacttgacggctgttgctcgccagtcacctgacacgccggtaagtacgtatcgccgttaacggttcggttaatcaatcccacacaaaccggtgcttagcggttggtgcacatactagacggtagatagagtcaagattatttaagaaaagaggaaattatgacgcgccatgaatgatatatatttgagtagaagtgtagaactcgttccagcttttgttcctgggtatagacattgaattggcacagacgtgttggaacctactctcttcgtggactggatgtcaccatgtgtgtacgcaagagaagtatagaacttagagaaaaattcatggcgagcgtccatggccttcaggtctcagctgtcttttgtattcttgcttagaaacacgctgaacacggtagagacatttcttcttcagaagttacaggggaagcccttccatccgtgtctttgtcgatggataagtgcctgttcttgtcgcccgtggtgtagcataatggtattttctttagcacatcgctgtttcttctttttcgcgtagttattatcgctggtggtcatccgttgcagaattcaatcgggagagtgattccctaaggttaacgccacttatgtaggcccttggcgcctgcagcgcgaggcccttccaaattgcttgatgttgatgtccaggcactcaaagctgggatttgctacaacatttcaagaaactcacattgaagaaactcacagcgttacacaaacattcatttcattgctagtgccaaaacaatcaagcagcataggagaaaaaacatttttcaagtttcagcactgaaactatcgccaagttgaaacagaggttcaagacacaaataaccaacagatgcactaaatcttgcaaatgaaaagaaaaagtgggttcctagtgtttcctggctatctaaatcctctgcattaggttataggaatgaaaatctgactgtcgcaattctagtcccatgccctcgacaaggaaagatgagaaaatgaagtgggaaatatacatcaatcaattatatcctcactaagtgctagaatagtgcttctatgactagaacactaggaaaaagatttatttgatgaaacatgattatcacctgtttccctctaattaaaagcgtcttctgtagacctgcaagtaaagtagcaggatgatcattgtcatatacgatgttcctaattacaagagagatttttttttaattcaatcagctgttttttcccattcatgaaagcaaaatatggttgaaatgctactatgctagtaataatattctatgatcaacgagctctatactgaagttcacctacaaaatgaacagatgaagatatggatgacgccagatagtgaaggttatggcaaatgcattgaacgcccgaagaaacatgacagtaagctattactctccatctttcaagttcatgctagtttaaactgagtgcctacgcttaaccacatatcatatgcttcttgccaggaatgaacagtgcaacagctggttatataattgttaatgccaatggtggattgaaccagatgagactgggagtatgtacacatctatgttagggaaaaaaaacctttaaacatatcaagatgattacgacttccagctcacttacattgcttcaaaatctttcatgcagataagcgacatggttgcagttgctaagctcatgaatgcaacactagtaatccctactctggatcacaaatcattttggactgatccaaggttaatctctttatgaccagtataaatatactataatgagggtcctagagaaactactgggatatataactgatgttttggtcctaacatgcagtgatttcaaagatatatttgatgtggaacacttcaagaaaactttagagggtgacatttcgattgtggattccttgccactagcttataaaggattgaaactttatatgagagcacccacttcttgggccaaggtatggaccaatcactcaagtgggcatcaaagttatttagaaaaagacataatatactgcagtcgaagagttatgaactgctagttacttttctgcaggcttcttactacagagctttctcaaggacactgaagaaggccaaagttgtgaaattcacacatacagattcacgaattgttaacaatggtcttcccccatccatccaacgactccgttgtcgggcaaattatgaggcactaagattccacaaagaaattgaagagctgagtactgctctagtagatagactgaggaatggatccaatcattatatcgcacttcacttaaggtgattgaaactggaaatgttaagtgaagctgacataattttgctgcaaataatcttgcagatcagtaatgtacttccttttcttatcaattaacaggtatgagaaggacatgctctcatttactggttgcagccacaacctaacacataaagaggcagatgagctgagagaaatgagactcaacgtgcggcactggaaagagaaggaaatcaacagtagggagaggagactccaaggacgctgccctatgactcctcgtgaagtagctcttttcctcaaagctatgggctatccttccagcacaaagatctatattgtagcaggtgaaatatatggtggacatagcatggattcattaaaggctgaatatccaaacatatatacacattatagtctggcaacggtagatgagttagagcctttcaagctataccaaaacagattagctgccttggactataatgtagccgtccaaagtgatgtttttgtgtatacgtatgatggaaatatggctaaagcagtacagggtcacagaagatttgaaggattccaaaaaaccatcaacccagacaggtacagttctaggaatgttgtaattattatacctcaattgtaagagctgaattttttaactgattgtaggcagaagcttgtgggactcattgacaagcttgatgaaggtacactaacatggaatgagttccaaagtgaagtgaagatacatcatgaaaacagacttgggggtccatatcagaggttatctggtcgaagtcctaggcaagaggagtacttctacgcaaatccccttccaggctgcttgtgcaaaagaatgcaaaggattaaatgacgctgatttgttatgaagaggatgtgatattattgtcttcaaaagttccaaccacttccctgatgtagcatggatatacaaacacaaaatcttctaacaaagaattacactggtaatggacagggacagcccacagataattttcctagattaacagtgtatgcagccatcattcatagaaaaggaagcaggaggggcaggtccatttattatcgtctgagatctgcatctccagttgattatttattcaagtatacaggaaacggaagagtaaaaaagattttaaataccagcaaagcatagatgtgccagaagtgatgggatagcttgaaagaataccttttttagtgcatgtatgtagttcacacttcacacactccatatgtacagtctgtcctctttttatattttgtattcatcccaaaattgcagctttattcagataggcatgtatgatgtatatagagagagcaggatgtacccaagaagaaacaagtgatgaatggtaaattcttttttagtttatttcattc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0851100, RefSeq:Os01g0851100