Os06g0671000

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Revision as of 09:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0671000| Description = Similar to Potassium transporter 1 (AtPOT1) (AtKUP1) (AtKT1)| Version = NM_001064865.1 GI:115469461 GeneID:4341805| ...")
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Gene Name

Os06g0671000

Description

Similar to Potassium transporter 1 (AtPOT1) (AtKUP1) (AtKT1)

Version

NM_001064865.1 GI:115469461 GeneID:4341805

Length

7326 bp

Definition

Oryza sativa Japonica Group Os06g0671000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:28696966..28704291

Sequence Coding Region

28697335..28697397,28698228..28698459,28698566..28698814,28699122..28699172,28699331..28699591
,28699674..28699726,28699856..28699970,28702321..28702575,28703078..28704135

Expression

GEO Profiles:Os06g0671000

Genome Context

<gbrowseImage1> name=NC_008399:28696966..28704291 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:28696966..28704291 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgtggagggtggtggtggtggtggtggtggcgcgccgcccagggggaggaattcttggggatggcagaaaggaacacttctactggcatatcagagcttcggagttgtgtatggcgatctctgcatctcacccgtgtacgtgtacaagaacaccttctccggaaaattgcgtcttcatgaggaggatgaagagatccttggggtattatctctggtcttctggagccttactcttatacctctcctcaagtacatcatccttgttctaggagcagatgacaatggagaaggtggcacatttgctctgtactcattgctgtgcaggaattccaagatgggacttctgaacaacatgcgtgcaaaccatggttctctgtcggcatacaacaaggaggaaccttgtaaggagtcgaggaacagcatgctcatcaaggccttcttcgagaagcattactcgcttcgtgttgtgctgctgctgttcgttctgatgggtactagcatggtaattggggatggtgtcttgaccccaacaatgtcagtgttggcggcagtttctgggctcagaattaagtttccagaactacatgaaaattacactgtgctccttgcttgtgtcattttaattgggctttttgcattgcaacactatggaacacgccgtgtcggattcctattcgcaccaatcttgatttcctggctcacttgcattggtgggattggcatatataacatcataaagtggaaccctagtgtcatccgtgctctgtccccgtattacatatacaacttcttcaggaaggctggcaaggatggctggagctcactaggagggattgttctttgccttacaggtgctgaagccatgtttgctgatctggggcatttctcaaagctttcactgaggcttggattcacaattgttgtatatccttgcttagttctggcttacatgggtgaggctgcatacctgtccaaacatagggaggatctccaaagtagcttttacaaagctcttccagaccgtgtgttttggccagtgttgttcattgcaacgttagccacagctgttgggagccaagcgatcatctcagctacattttccatcataagccagtgtagggctcttggttgtttcccgcgaataaaggtggtgcacacatcaagccatgtccatggtcagatctacatcccagaggtgaactgggtgctcatgtccctctgcttggccgtcacgattggattccgagacaccgagatgattggcaacgcctatggacttgcagtgatcttggtgatgtgcgcaacgacatgcctgatgttcctggtgatcaccaccgtgtggaaccggtgggtggtgtgggcggcggccttcaccgtcgtcttcggctccgtcgagctcctctacctatcggcgtgcctcgccaaggtcccccatggcggctggctcccgctcctcctctccctcaccacgctgctggtgatgtccacgtggcactacggcaccgccatgaagcagcagcacgaggtccagaacaaggtctgcctggaccacttcctcggcctcagctccggcatcggcctcgtccgcgtccccggcgtcggcttcgtctactccagcaccaccaatggcgtcccccccatgttcgcccacttcgtcaccaacttcccggccttccaccgggtcctcatcttcgtctcgctgcagacgctcgccgtgcccaaggtctcgccggaggagaggttcttggtcggcaggatcggctcgccggcgaaccgcctgttccggtgcatcgtccggtatgggtacaaggagggcaggtgggaccacttcaacttcgagaaccaactgctgatgaaggtcgtcgagttcctccgccaccaggacggcagcggcggaggcggcggcgatcggatgtccgccgccgcctccggcgaggacgaggccatgtcggtcatccccgccacgtcgtcctccggcggaagcaatcagcacgcctttgacgccgggacgacgacgagctcgtgcgagatcgacgccaccgcaggcggcggcggcaggaggaaggtacggttcgacaacgacggcggcggcggcggcgaggaggaggaggaggcggcggaggtgaaggagctgatggaggagaaggaggccggcgtgtcgtacatgatcgggcacacgtgcgtgttcgcgcacgagtcatcgtcggcggtgaagaagttcgccgtcaacgtggtgtacggcttcctccggcgaaactcgcggcggccggcggtggtgctcggcatcccgcatacctccctcatcgaggtcggcatggcgtacagggtatag</cdnaseq>

Protein Sequence

<aaseq>MDVEGGGGGGGGAPPRGRNSWGWQKGTLLLAYQSFGVVYGDLCI SPVYVYKNTFSGKLRLHEEDEEILGVLSLVFWSLTLIPLLKYIILVLGADDNGEGGTF ALYSLLCRNSKMGLLNNMRANHGSLSAYNKEEPCKESRNSMLIKAFFEKHYSLRVVLL LFVLMGTSMVIGDGVLTPTMSVLAAVSGLRIKFPELHENYTVLLACVILIGLFALQHY GTRRVGFLFAPILISWLTCIGGIGIYNIIKWNPSVIRALSPYYIYNFFRKAGKDGWSS LGGIVLCLTGAEAMFADLGHFSKLSLRLGFTIVVYPCLVLAYMGEAAYLSKHREDLQS SFYKALPDRVFWPVLFIATLATAVGSQAIISATFSIISQCRALGCFPRIKVVHTSSHV HGQIYIPEVNWVLMSLCLAVTIGFRDTEMIGNAYGLAVILVMCATTCLMFLVITTVWN RWVVWAAAFTVVFGSVELLYLSACLAKVPHGGWLPLLLSLTTLLVMSTWHYGTAMKQQ HEVQNKVCLDHFLGLSSGIGLVRVPGVGFVYSSTTNGVPPMFAHFVTNFPAFHRVLIF VSLQTLAVPKVSPEERFLVGRIGSPANRLFRCIVRYGYKEGRWDHFNFENQLLMKVVE FLRHQDGSGGGGGDRMSAAASGEDEAMSVIPATSSSGGSNQHAFDAGTTTSSCEIDAT AGGGGRRKVRFDNDGGGGGEEEEEAAEVKELMEEKEAGVSYMIGHTCVFAHESSSAVK KFAVNVVYGFLRRNSRRPAVVLGIPHTSLIEVGMAYRV</aaseq>

Gene Sequence

<dnaseqindica>370..432#1263..1494#1601..1849#2157..2207#2366..2626#2709..2761#2891..3005#5356..5610#6113..7170#aggtacacagacacaaggctgccgcatgtatgcgtcatgtggcagccagagggagaggaacaaggcaccaaaccaaccatggaatggaagcaaaacactcctaacaatttggcgccctctctgtctctctctctctctctccccccttctttttgtgagaagcctcctcccacgttttcccgtctccttaactgcttctctccttcctctcctacacaactgtggtggttgcagcaagaaagagagagagggtctgaaggcagcaagaattcagtagcattccagctgccgtgggagagagggcaagagagcaggagaaagaattccagcggcggcggcggcggcggcggtcgtcggagaggtggagagatggatgtggagggtggtggtggtggtggtggtggcgcgccgcccagggggaggaattcttgggtaatcaattaagctttggttcttggtttggttctttggtctttcagttttgtgtttgatttggttggtttggtgcattttgtttgcaagtaattttgcagtgttactgcggattctgggatgagttactttgggtgcgggcgctatctcaagttcctcagggttaaattttgtagattttctgcattttgttctgaaaaaaactgaactttttcgaagtctatggcgctacaatttcgcttgaatctacttctgtctgactaggtgtttctgtgtatgcatgagacagagaatgctctgaagctaaggttgtagcggcgcacttcttttcagttctgaatttaggtggtaaagttggttgttttcagttaattaattttgcatcagtccagctcattagttgcagtcttgcagagtgatatgttatgctttctgaatctgataaggggaatccatgagttcaggaatcaatagattccatagacgagatggtatcacgaaatctttgtaatgcactgtaattttcctctttggtaaacgggtccattttcttacatatacacgatttttaaacgtagccatcaggtcacttttgatggtcagattggacatttcctttcaacttagtactagttactactacttcagagtttgagattttttctgtttactttgaatactatcttgttgcctatttcaagttactctttctagatcatcaattttggccagcagtaaaattcaaagtagtcaagtcgatactactgattagtaattacgtcatcaaatggtcacggacacgaaagcatgacacggtctgtgtttgctagggatggcagaaaggaacacttctactggcatatcagagcttcggagttgtgtatggcgatctctgcatctcacccgtgtacgtgtacaagaacaccttctccggaaaattgcgtcttcatgaggaggatgaagagatccttggggtattatctctggtcttctggagccttactcttatacctctcctcaagtacatcatccttgttctaggagcagatgacaatggagaaggtgatttcaaaaatccgcgtgtttttcgccgtattaataatttcaatgtgcatttagttaaatatatgccatttttgtcttgcaaatgtgccatgtatgtttgcaggtggcacatttgctctgtactcattgctgtgcaggaattccaagatgggacttctgaacaacatgcgtgcaaaccatggttctctgtcggcatacaacaaggaggaaccttgtaaggagtcgaggaacagcatgctcatcaaggccttcttcgagaagcattactcgcttcgtgttgtgctgctgctgttcgttctgatgggtactagcatggtaattggggatggtgtcttgaccccaacaatgtcaggtactgaactctgaaagactgaaactgaagatttgtggaagttgtatgctcaaggcacaaattttgctgcttgatcatttttttagaaattttagataatggaagtgttttataaaccaaaaatatatatgagcatattttgtatacaattgacaaacgtatatgatagagtaaggaactttgttttttaatttcttttttttaaaaaaaaaacagagagtaaggaattcttggggaacatttaaattgctttaacatcatcatgttttgtttgtgactgaagagggtggcatgttcttttctgcagtgttggcggcagtttctgggctcagaattaagtttccagaactacatgaaagtaagcagctgatatattggcttgtctcataaaggtttactggtcactcctcttagcagcacacatttaaattactcttattctcaattctttttcttcttaatgtctacttgcaccagaaaatacagctgatctgctcctgttacacttctctgcagattacactgtgctccttgcttgtgtcattttaattgggctttttgcattgcaacactatggaacacgccgtgtcggattcctattcgcaccaatcttgatttcctggctcacttgcattggtgggattggcatatataacatcataaagtggaaccctagtgtcatccgtgctctgtccccgtattacatatacaacttcttcaggaaggctggcaaggatggctggagctcactaggagggattgttctttgccttacaggttcacatatttttatccttttagttttggtttatcacttgttttcgttgtaacatgcttaattatagccgtagattttcaggtgctgaagccatgtttgctgatctggggcatttctcaaagctttcactgagggtaatatgattttcagtggtgaattggtgatagtttcagtcttggtagctgaaagagtacacttttttttttttgctaagaattagggaaagaaatctttacacttatttttttgttttgccatgacagcttggattcacaattgttgtatatccttgcttagttctggcttacatgggtgaggctgcatacctgtccaaacatagggaggatctccaaagtagcttttacaaagctcttccaggtgagatgttaattctcttgccagattgcttcaggttttccgctgctttttttttctcatcatcttttccaacagagagtacattgattcttgtaatattatatttatcaatcccttcagagtttagtatatataatatcagtagaatttgtgcatggcccatgtaaagcttaacacaagatcagggaaaatctggcccggcccagttatgccccaaaggtgttatgggccatgttcgggcagtattaagcacaaattcagccctaaacaaattcttctaatttcacggtacaaattcagtgtgtggtcaggactgaaacagaaggcctgagaaacttgggccaggaattttggcctgattccaatttccgtccatcgtttcgtctgttaatgaagtgcacatcattcttgtataactcactttcccttgtggatctgtggttttctattacttatattaccaaaaagaaatagtgtataaaggaagtagaaggatgtgaatttgtttgtgaaaggttaatgggcctttcaaggtcttagtgtatggaataactcaggaaactacaaatcggatgtccgattctcttaaaaaaaattgggtggttaaatatttcagttgaccaccagtgaaacattaagttatgcgtgatgaaaaaaacagccattgattttttttttgtgtgtgaaacatagtgaaaacacacgtttaaacatgtcgttatcgtgtatgaaacattgagttttaacagttcgaaacatatgttttctttcatcagaatataatctttgtgatatcttactgtgtgatcggatcataagtcagacaagtaatttaggagaaaaaaatatgttgaaaatcacaaaatacatacatgtatggatgaagtgaagagaacaactagtagactccaacattaagaatttattttcttggcaaatttatttaagtttgaaagctaacataaattcaaagagaattggtttaaagctaagcatcatttttgtcgagtataaacatgcaatatttatatcacctttcattaagaaaaatattcaaaaccatgactcgctatgagcagtagattttaatatttagattgaataattagcatgaaaactggtatgtgtgctaaaaggcaacaactttcgtgctagtgcacttaatccgttgcttttcagaagaacccgcaaatgtaactgaaatataagacctaaatactaaaccaactgaaccacaaatatgcactatattggatgatagccctagccgccgactccgacagttgagaagtgacaaacctttcgattgataatcagattatctgatgaaggtgtgagcataacaactcactcatgaagattactacttggagagataggcaagccttcagctaattgaatactcaacagtcaaaatgctattcgagtaaaaggaatttgttgaagacaccctaaggccttaatggtccctcatctgcctcgagcacataaggtagggaccagaaagttatacacgtagtccacaggttatttgtaaacctaatactatttaacgtaggaaaatatctatattaccctcaagtcataggccattgttgaggggatgttgtatgtaatttcttttgtaccctatctagattaattagaaaaccaccttagtgacaatgtaaagggggactatctttagaggaaaaaagttgtaacaagcttgtggtaccacacttactccccatcgaaggttaggggccttcaactcttgggccccttactctagaactcggaagtagacaggagacacacatattgtatatagtagtcctataatatttttcaagaaaaactagcggtacaacagttgtagtgaacgtatatatgtttaactagatgaataccccgtctcgttgctacgggaaattaaattgtataatatgtacaaataagatgcaatatattttctaaaccaaaacaaaatgacttcctatatatgttttatctaatctacacatggttgcaatataatgcaaggtgaacatattttatgtaattgatacttataaattttgagcctaaaaaaaattgatattgtatggtttcatgggtgaagaaaaaataaactatttgtaccatagatctatcatgctagggctaaaaataattgagatgatgtggcttaatgagagaagagaggaataacattaacaatacttattaacggggatgaactatataagtacataggattacatttccttctaatgcagcaattgaagttattcgacaccttctagttattttccagctagtgttttacatatctgtgtatgtttccttttgctacatatatatgcagaccgtgtgttttggccagtgttgttcattgcaacgttagccacagctgttgggagccaagcgatcatctcagctacattttccatcataagccagtgtagggctcttggttgtttcccgcgaataaaggtggtgcacacatcaagccatgtccatggtcagatctacatcccagaggtgaactgggtgctcatgtccctctgcttggccgtcacgattggattccgagacaccgagatgattggcaacgcctatggtaactagcacatcatttgcttcttcttttaaaccagactcttacacttgaggtaggatttggttaaacttttaaaactttgattaacaatactttcttagatgtttagtttataaagacaaaaatggtatacacaaattttccttgagaaaaacactatatactaatatcgtaaccttgttatattttataacttattccaatataaaatttatagtcaaatatttaattaaaagttgatcgaatcttgtcctttaaggctacaaagagtaaatttaggtgactgataaatagtaacaaccagtatatcaacacccattaattacttgtgttaagataaattttatggtccgtaagatatatcaagagataaattttgataccttctgataccggatatatcaagaggtaataaattttgcattagaaaatatgaccatacctccagataccttttcaataaccgtaaaatcactcagttatcttgtgttaaaatttgcaggacttgcagtgatcttggtgatgtgcgcaacgacatgcctgatgttcctggtgatcaccaccgtgtggaaccggtgggtggtgtgggcggcggccttcaccgtcgtcttcggctccgtcgagctcctctacctatcggcgtgcctcgccaaggtcccccatggcggctggctcccgctcctcctctccctcaccacgctgctggtgatgtccacgtggcactacggcaccgccatgaagcagcagcacgaggtccagaacaaggtctgcctggaccacttcctcggcctcagctccggcatcggcctcgtccgcgtccccggcgtcggcttcgtctactccagcaccaccaatggcgtcccccccatgttcgcccacttcgtcaccaacttcccggccttccaccgggtcctcatcttcgtctcgctgcagacgctcgccgtgcccaaggtctcgccggaggagaggttcttggtcggcaggatcggctcgccggcgaaccgcctgttccggtgcatcgtccggtatgggtacaaggagggcaggtgggaccacttcaacttcgagaaccaactgctgatgaaggtcgtcgagttcctccgccaccaggacggcagcggcggaggcggcggcgatcggatgtccgccgccgcctccggcgaggacgaggccatgtcggtcatccccgccacgtcgtcctccggcggaagcaatcagcacgcctttgacgccgggacgacgacgagctcgtgcgagatcgacgccaccgcaggcggcggcggcaggaggaaggtacggttcgacaacgacggcggcggcggcggcgaggaggaggaggaggcggcggaggtgaaggagctgatggaggagaaggaggccggcgtgtcgtacatgatcgggcacacgtgcgtgttcgcgcacgagtcatcgtcggcggtgaagaagttcgccgtcaacgtggtgtacggcttcctccggcgaaactcgcggcggccggcggtggtgctcggcatcccgcatacctccctcatcgaggtcggcatggcgtacagggtatagtagtgtagtatatatactccgtatatacaactatacgtacatacatacatacatcgctgaagagagtgtagcatttcatagcctcacttagtgttgataaccaaaactggcaagggggtagaattagaagatgagaaacggtttatatttgggacc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0671000, RefSeq:Os06g0671000