Os09g0517800

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Revision as of 07:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0517800| Description = Cyclin-like F-box domain containing protein| Version = NM_001070217.1 GI:115480176 GeneID:4347590| Length = 3608 bp|...")
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Gene Name

Os09g0517800

Description

Cyclin-like F-box domain containing protein

Version

NM_001070217.1 GI:115480176 GeneID:4347590

Length

3608 bp

Definition

Oryza sativa Japonica Group Os09g0517800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20840136..20843743

Sequence Coding Region

20840798..20842024

Expression

GEO Profiles:Os09g0517800

Genome Context

<gbrowseImage1> name=NC_008402:20840136..20843743 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20840136..20843743 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtatctgagaaagccaaatcaaataagcggaaaaagttagaatgcataatcagccgcctcccaagagacttgatcgagcaggtatttctgagccttccagtgaaaactttgttgaattgcattggtgtctgcaagcagtggcgcagcataatccaagatcccaaatttgtaacatcacacctccagcttgcgccccattgtgcgctcctattcttccctcgagagttggtttcttcatgtgggctgtacccgagcgaagccatcctcatcgatgaagcctggtcacagtcaatatgggatgtgccagtgattgggccagatgatttcctgtgtggttcctccaatgggcttgtttgcttatacacacacactacaacaatcaagatagcaaaccttgcaactggtgaatgcctgcatcttgcgaaaccggcaaagaatttgacggacgatcacttctcgttctacagctttggatttcacccattgacaaaagaatacaaggttacacacttccttgctagtagtcatgagactcgcatccgtgcaaaagttgacagcttcgatggcgttcaagtttacacacttggtgatgagaaatggaaatatataggagccccagaggctctaagcttgaactgtgtgaagaactctggagtagtcaatgttgatggaacaatgtattggctaactgaagaccagggaaccagttggcatcatgcagtcatgtccttcgatcttaacaaagaaagttttggacgcatacaactgccaacagcagcacttgaagactctgcattttatggtcctcgtcggtactggatcaaagagatagatggaaaggtatgcattgcaacatgtcaaactagtgataatcaacccatattgcttagaggtgagattcagatctgggctcttgacatcaatctagagcaaaagtggatccagaagtacattattcagccctcagcacagcacatacctggaccaaatattgttcatagggataagattgtgttgcaacatgatgccaggaacctatgttcttatgagctgcttggaaagaacgtcgaggttaaattgagtaatatggagaagctgttagatttcagtccccgcaaaccagggagtatgcaagtctacacctttgtgaaatcacttgtacgattggattcatacaagaaggccagtattgtgcgtagaccaaaacggaaggttgggaattga</cdnaseq>

Protein Sequence

<aaseq>MVSEKAKSNKRKKLECIISRLPRDLIEQVFLSLPVKTLLNCIGV CKQWRSIIQDPKFVTSHLQLAPHCALLFFPRELVSSCGLYPSEAILIDEAWSQSIWDV PVIGPDDFLCGSSNGLVCLYTHTTTIKIANLATGECLHLAKPAKNLTDDHFSFYSFGF HPLTKEYKVTHFLASSHETRIRAKVDSFDGVQVYTLGDEKWKYIGAPEALSLNCVKNS GVVNVDGTMYWLTEDQGTSWHHAVMSFDLNKESFGRIQLPTAALEDSAFYGPRRYWIK EIDGKVCIATCQTSDNQPILLRGEIQIWALDINLEQKWIQKYIIQPSAQHIPGPNIVH RDKIVLQHDARNLCSYELLGKNVEVKLSNMEKLLDFSPRKPGSMQVYTFVKSLVRLDS YKKASIVRRPKRKVGN</aaseq>

Gene Sequence

<dnaseqindica>663..1889#gggagagctctcccatcccacccaccaatggcggcggccgcggagttcatctgatcgtgctcgtaatagtaattcgtaagtttccccaaccagttggttttttgctcccgctgaagcgcgctttgtttgcgacgctttggttgattcctccctaatggcggctagggttcgcgacaggtcagggtgttcccctaattgcggctaagcgtcatctgaaatttttgtggtaaaaaatgagtagtaagcatcatgtgaattgtggtctagagtggtcgtaaaaatgatgcgttatttgttcttaggttggagagaacagggggatgcagatgtaatatatcttctgtgcgactgtagtattcaatcttttggctgaagggtgaggatttggggactgtatttgtagttgagagtgatttagagatttttttgctgcgaggataatgttgaagaggcttaatgatttattcatttatgaattgtttagtacacaaaagataaaatgaaaatgaaatatagtttgcatagttttcgcgttatttgcctgtaagttgttcaatccttagtctctatgcatgcagtatgcccaatcatcatcttgataatgtgtgtgtttgcagaaggattgtctagtcactgtgttggcggattaaattgttctcagcatggtatctgagaaagccaaatcaaataagcggaaaaagttagaatgcataatcagccgcctcccaagagacttgatcgagcaggtatttctgagccttccagtgaaaactttgttgaattgcattggtgtctgcaagcagtggcgcagcataatccaagatcccaaatttgtaacatcacacctccagcttgcgccccattgtgcgctcctattcttccctcgagagttggtttcttcatgtgggctgtacccgagcgaagccatcctcatcgatgaagcctggtcacagtcaatatgggatgtgccagtgattgggccagatgatttcctgtgtggttcctccaatgggcttgtttgcttatacacacacactacaacaatcaagatagcaaaccttgcaactggtgaatgcctgcatcttgcgaaaccggcaaagaatttgacggacgatcacttctcgttctacagctttggatttcacccattgacaaaagaatacaaggttacacacttccttgctagtagtcatgagactcgcatccgtgcaaaagttgacagcttcgatggcgttcaagtttacacacttggtgatgagaaatggaaatatataggagccccagaggctctaagcttgaactgtgtgaagaactctggagtagtcaatgttgatggaacaatgtattggctaactgaagaccagggaaccagttggcatcatgcagtcatgtccttcgatcttaacaaagaaagttttggacgcatacaactgccaacagcagcacttgaagactctgcattttatggtcctcgtcggtactggatcaaagagatagatggaaaggtatgcattgcaacatgtcaaactagtgataatcaacccatattgcttagaggtgagattcagatctgggctcttgacatcaatctagagcaaaagtggatccagaagtacattattcagccctcagcacagcacatacctggaccaaatattgttcatagggataagattgtgttgcaacatgatgccaggaacctatgttcttatgagctgcttggaaagaacgtcgaggttaaattgagtaatatggagaagctgttagatttcagtccccgcaaaccagggagtatgcaagtctacacctttgtgaaatcacttgtacgattggattcatacaagaaggccagtattgtgcgtagaccaaaacggaaggttgggaattgaagaaatgggaagcatgggagagccagcgtcgaaagatagaggacatatggaagaaagtcctgcaatcggagcaatatagtattgtatgttggctaaactgtcaccactgtcaatagatattcggtatgccagtttacaattttgcattttgtaggtaactacgaagaatttgcgcacaacaattaacaggctgatgcagcgtctaccggatgatgaagcattgaagtgtataggcatgaaaattgatcaaatgttacattatctaccagaagattgtccaaatcaggtaattctctattcaaatgggagttgaaaaactatgtgaatttcaatttatatgtgtagtgatagctaaaatatcaagggtgtggtaatatatggagttttcaagtaaactgcatttaagggtgtgtttgagagaagaggaaaagagaagattgagaagatatgtaaaacaagatgagccattagcgcttgatgatttgagtattaattattttaaacttaacaaatgaattaatatgattttctaaaagcaatttttccataaaaaaaagttttagaaatcacatcgtttagcaattgggaagcatgtgcgtgaaaaagagatatttttcttcccttcatggaaagccatagtatatattgtgacaaatgcgttgcctgagaattcagcatccaaggtctctccggcgtcttaattgggtggcgcagaatcaggacatggataatttagaggctcgtgtggataaactaaataaattgaggtattttctagcgagcactatatacatatatcattgaaacattgcaaattgacagagctaacccgctaatctgctacaaatcaggcatgtgatgatgtcttccggacggcaagaagttggttaagcgatcaggtaaatgtctacgtaggtgctaatcttttctgttacggattgcaagctccttttacatgtttctgatctgatcccctctgcaatttattaatttctcgctagaaaactaattaatcatgttatctccatctgcatagacgaatgacttccttatgcgtttattgttccaccttatgtacgagtaaagttatatagctaccgaatttgatgagttcttactctagcaatccacatatgacaaatttacacgatatgagaaacaaattgccaatgtttgagtaaatacactaacaaaaaaaaaagtgaactgaacaagcttcggtacatctgtggtgtattcttcggtagttaaattcaccagtgttatctatttatcttatgggattcaagagattttctcgttttaaccgtttttgtggtaatgctatgggttccccagacttgatgaatagtatcaaacacttgtatttgtatgtcacagggtacttcgatttccaccgctgatgcttcattttggttcgacctccaacattttctactcggtggcggcggtgcgagatgatggtggtgatatgaagattatagaactttttcctggcattttgggtttctgggacaattcttgctgctacgtcctccgttttatcatccagtttttttgtttgtgaacctccccttctgtggataaaattctgactgatgatagtatttcttcgatagaccgtgcatccggattcgcgatctcaaggtacaattgtacaaaggtgctattaaggctgtgttcgttgattgctgtcggtaacaaatctctctcgcgcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0517800, RefSeq:Os09g0517800