Os01g0876500

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Annotated Information

Function

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Expression

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Evolution

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Structured Information

Gene Name

Os01g0876500

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001051505.2 GI:297598037 GeneID:4325082

Length

2009 bp

Definition

Oryza sativa Japonica Group Os01g0876500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39787310..39789318

Sequence Coding Region

39787345..39787378,39788180..39788391,39788699..39788740,39788826..39788840

Expression

GEO Profiles:Os01g0876500

Genome Context

<gbrowseImage1> name=NC_008394:39787310..39789318 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39787310..39789318 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaggaaccctacccgcaccgtctacataggtaacttggatgaaaaggtaactgaaagaatattgtatgagattcttattcagccaggtcgtgtagtagacctatgcatacctcgtgacaaggaaactagttgtcccaaaggttacgcttttgctgagtatgaaacagaggaaatcgcacagtatgctgttcaacttttttcaggacttgttcggctttatggtaaaacactcaaatttgcgatctctggacaagacaaaccctcatcaaatggcaataatccacggatccaatggtaa</cdnaseq>

Protein Sequence

<aaseq>MARNPTRTVYIGNLDEKVTERILYEILIQPGRVVDLCIPRDKET SCPKGYAFAEYETEEIAQYAVQLFSGLVRLYGKTLKFAISGQDKPSSNGNNPRIQW</aaseq>

Gene Sequence

<dnaseqindica>36..69#871..1082#1390..1431#1517..1531#gagcgagagagcttcacgcccagatccgggcggccatggcgaggaaccctacccgcaccgtctacataggtgagcgtctgtctcctcttccccctccccgcggcgctcgcggtggcttcagattttggttttagttcggattggagtagattgatgtacacctcggtgatttgattgatcaattagttggttggtacttggtaggttggttaagttgtatgatgtttccgtggtgtcctcggttagcgtggttacgcgtgatttgtggatttagcgtggttgctgttcctctgatttctgatgggtgcaactgcaaatgtatcgttgaaaggattcctgttgttccccttgtatttcttttactggctaaaacgatgagtgcatttggaaatagagctgctagatgctagtatcaaagcttgacaagtgattgcactgttgctgctatgaactttacttgataataacgttggactgtgtttcacaagtagcatttcaatttctacacgtttcttaaacttacctggcatggagatactgaacttccacttttctctctttttttttttggttgcgaggaacttttagtcttttactgtttgttgcattagtgaatctgtagcggctctagtctattgaacttttctccagttgttagctttcttagcaattctctgggctatgctaatttattcggaaccttgtcaatttatttgcctgcaaatgcaatgttttttgtggacagtcctggtgtcatctggtattgtttgtatgtatattgtatatctagtgttttatgtagtctaagcagcttcatttctctgtatcagagtattgtattaattatattgcaattttttcctacaataggtaacttggatgaaaaggtaactgaaagaatattgtatgagattcttattcagccaggtcgtgtagtagacctatgcatacctcgtgacaaggaaactagttgtcccaaaggttacgcttttgctgagtatgaaacagaggaaatcgcacagtatgctgttcaacttttttcaggacttgttcggctttatggtaaaacactcaaatttgcggtaggtttcctttttatctgttttttttttgtttggatgtgttacttctatatgatcatcagcttcttatgattaaactgtaccaatatgattacagcttgcgaaattagagtgctagtagttgttcttgtgttctgtgccatacaatttcgcaaaagattgataattctgatttcccaaaagattgataattctgatttcgaatttcttccacatcctttagataatgttttagttcatacttatctatatttatgcggatatgaagagggtcagttttctgaatttatatcattgtcttttgcagatctctggacaagacaaaccctcatcaaatggcaataatccagtaatgcctaaactcaatcctgtaccattaccaaagcagcctcagtttgtgcatcatagtgatatgcatgtattgcataccccagcggatccaatggtaaatggtgggacaagagattatggcttttcaaactattatccttatagtgctaatccccaaggtgagattatttcctgggcctatctatatgtactgttgtacgctgcatatatgtcactcttaatctaatcctactattcttttgctaaccagcattaccagttggacccgtgcatagctacagagggttcagcaatggtacgtatgattgcagtacatgcatatttggttctattgttaatggtaggtatggagattatgttttgaatgctgctggccatggagctccgaggcaaccaatgttgtatccgtcctactaggcaccaaagaagggaatctggtatgttgagttgttgatagagtaggctggttgggattagctccctgaaattttcatctcttaatgcacatcattgtcatacatgtacagaatatggctctcttttatgaatggtaattagaaaatcttagtacaacac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0876500, RefSeq:Os01g0876500