Os01g0884400
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0884400 |
|---|---|
| Description |
U box domain containing protein |
| Version |
NM_001051552.1 GI:115441474 GeneID:4325007 |
| Length |
3816 bp |
| Definition |
Oryza sativa Japonica Group Os01g0884400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:40165089..40168904 |
| Sequence Coding Region |
40165985..40166254,40166405..40166506,40166593..40168551,40168638..40168697 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:40165089..40168904 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:40165089..40168904 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggattcagtgtcattgtcactactcgatagtatttcaaatttccgggtgctgtcttcaagcaatgcctcgaaaacagagctagttaagaaatattgccaaacgatggatggcatccttgatcacttggaggtggccctaaacagagcttttcctcagattactccagatggtgaactaagtaaagtgcttgaagaacttggcgctaccatcaatgaagcgactgagctagttggaggctggaatcaaatgatgagcaagatttattttgttattcaggctgattcaattattgccaagatgcagatatatgtattcgaattatgccaaattgtcaattctctcatgcagattgagtcaatgcatttggaggatcttgaacacgatagctgtggaaaaatttcagatgtcattagggaggcttccagggctttagcaggggaagttatgccaaattcagaggaatttggaaagattcaaactactttgagcttatccacaaatcaggagttgctgatggaatatgttgcacttgttaaggttaaaacaaaaggtaatcatgaagataacaaagaaatggatgatattaacgatattgttgaattagtcaaccatatgcttgacaaacatgtggaagaaaagcaaacacgtagcattaatggagtgaccattcctgctgatttttgttgtcctctttcccttgaactaatgtcggatccagtgattgtggcatctggtcaaacgtatgagcatgtttttatcagaaaatggtttgatctgggatacaacatttgtccaaagacacgccaaatattgggacacaccaaattgattcctaacttcactgtcaaacagttgattgaaaattggtgtgaggtacatggtataatgctaccagatcctgttaaactcttgagtttgtgcttccctgtttccctcaacatcacagatggaagtgcaagtgcagacaagtctggatcaccagaacactgccaattggtagctgcattgcatccaaaagcacagtgcgcatcggatgatagtcatcattataatttgatacatgaaaactctgattcagatgatagagtgtcatcatttggagacacagatgattctgaacctgattctttaagattatcaacagaaactactgcagcaaacaaatctctacttgatgaaaaaactgatcgttctgatggtcttaagcaattgagagacaatggttttcaagtttctgatgaggaacagtatctcgaaaggaatggtaaaagtcatatcagcagccatcatcaacttgaagttgatggagagaatgtcagggtacaagcatcaagtgacatcaatgcatctgaagttatgcaagatgatccggtcaccacatgttcaaaggtatcagataaccctcctagattgggtggtgttcgttctcgaaatcagccaaactggtggagacagtctaataaaactattcctaggatcggattgtcatcttcgacagattcaaaaccagatttttctggcaatgatgctaaagtgcgtaatcttatcgaggaactgaaaagtgattctgctgaggtccaaaggtcagcaacaggagagctccgcattctttctagacacagcttggagaatagaattgccatcgcaaactgcggagcaatccccttcttggtgagtctacttcattctacagaccccagcacacaagaaaatgctgtgacaattctcctgaatttgtcattggatgacaataacaagattgccatagcaagtgctgaggccattgagcctctcatcttcgttcttcaggtgggaaaccccgaagcgaaagccaactcagctgcaactttattcagcctctcagtcattgaagagaacaagatcaagattggacgttccggtgccatcgaaccattagtagatttactgggagaaggtaccccgcaagggaagaaggatgcagctactgcactcttcaatctgtcgatatttcatgaacacaagacccgcattgttcaggctggggctgtcaaccacctggtggagctgatggatccagctgctgggatggttgataaagctgttgctgttctggcaaaccttgcgactgtgcatgatggaaggaatgccattgctcaggcaggaggcatccgagtactggttgaggttgttgagctgggttctgcacgttcaaaggagaatgccgctgctgccctgctacaactctgcacaaacagtaacaggttttgcaccctggttcttcaagaaggcgtcgtgccacctttggttgcattgtcgcaatcaggcacagcccgtgcaagagagaaggctcaggttcttctaagctattttcgcaaccagcgccacgtcagggttgggagagggtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MDSVSLSLLDSISNFRVLSSSNASKTELVKKYCQTMDGILDHLE VALNRAFPQITPDGELSKVLEELGATINEATELVGGWNQMMSKIYFVIQADSIIAKMQ IYVFELCQIVNSLMQIESMHLEDLEHDSCGKISDVIREASRALAGEVMPNSEEFGKIQ TTLSLSTNQELLMEYVALVKVKTKGNHEDNKEMDDINDIVELVNHMLDKHVEEKQTRS INGVTIPADFCCPLSLELMSDPVIVASGQTYEHVFIRKWFDLGYNICPKTRQILGHTK LIPNFTVKQLIENWCEVHGIMLPDPVKLLSLCFPVSLNITDGSASADKSGSPEHCQLV AALHPKAQCASDDSHHYNLIHENSDSDDRVSSFGDTDDSEPDSLRLSTETTAANKSLL DEKTDRSDGLKQLRDNGFQVSDEEQYLERNGKSHISSHHQLEVDGENVRVQASSDINA SEVMQDDPVTTCSKVSDNPPRLGGVRSRNQPNWWRQSNKTIPRIGLSSSTDSKPDFSG NDAKVRNLIEELKSDSAEVQRSATGELRILSRHSLENRIAIANCGAIPFLVSLLHSTD PSTQENAVTILLNLSLDDNNKIAIASAEAIEPLIFVLQVGNPEAKANSAATLFSLSVI EENKIKIGRSGAIEPLVDLLGEGTPQGKKDAATALFNLSIFHEHKTRIVQAGAVNHLV ELMDPAAGMVDKAVAVLANLATVHDGRNAIAQAGGIRVLVEVVELGSARSKENAAAAL LQLCTNSNRFCTLVLQEGVVPPLVALSQSGTARAREKAQVLLSYFRNQRHVRVGRG</aaseq> |
| Gene Sequence |
<dnaseqindica>897..1166#1317..1418#1505..3463#3550..3609#gtcttcgtctccgcctcctgcgacgaagcgaagcgagacgcctccgcctcgcgcgagccaccacgagcacctcgacacgggagtccgaatcctcctcctcccccctccattggaggcctccgaggtaacggggcttcctctcctgctctggctgctgttctgctctgttctgcgcgcgtggtgtgatcgcgcttggttaccttgcggtgggggatcgagggagagggttggggggggggggggtgggggtgcttcgtgctgcattttgtgcttggatggtggaactcgccatggttgggtttgggaagatttgagcttagttcggtgcgctggtggtggtggatgtatgtgtgtactggacgtggtgatggcgtttgtttgtggtggtgggcaagtacggcatggggttttcgagatttctgtgcggttagggtttgtgatagtgtggggatagtgcttcggtgcttgtattggggcaaaaatgcgtgttcggtgagcttgtttgtatacagtttggactaagtagttctgaatttctgatgatcaccaattgttttacgacactgacgagatgtttcgatgctatcacgcctaaatttgttgctttccgttccaggtataagcacggaatttatgtctatcttagttcacatatatagtagataaataacaaggcatggttagtcatgcttggaagttagctagcagctcattttcactgaaacgtgcatgctaacctgcttgttattactcagctatttttcttacgcataacttcgaatgacagtggaatgcacctgcttgtttgtttagtcactctgagcctgtttgagcttccccgttcctttgtctccgcacccgaagtgaacttaatttttgatttgtttatgtaggtgatggattcagtgtcattgtcactactcgatagtatttcaaatttccgggtgctgtcttcaagcaatgcctcgaaaacagagctagttaagaaatattgccaaacgatggatggcatccttgatcacttggaggtggccctaaacagagcttttcctcagattactccagatggtgaactaagtaaagtgcttgaagaacttggcgctaccatcaatgaagcgactgagctagttggaggctggaatcaaatgatgagcaagatttattttgtaactactttgtcctttccatgataaatctccctcattagtcactacatatacaatgctttaatttccatccaagtaggatttcccctattattcttcttaatatgctacttagtaaataactcactatgagtaatatattgggtgcaggttattcaggctgattcaattattgccaagatgcagatatatgtattcgaattatgccaaattgtcaattctctcatgcagattgagtcaatgcatttggaggtgataaaaaaaatcctttcacatcttctcagtgacattgttttgacatctgattttcttatcagtgtgcttcttgcaacttgcaggatcttgaacacgatagctgtggaaaaatttcagatgtcattagggaggcttccagggctttagcaggggaagttatgccaaattcagaggaatttggaaagattcaaactactttgagcttatccacaaatcaggagttgctgatggaatatgttgcacttgttaaggttaaaacaaaaggtaatcatgaagataacaaagaaatggatgatattaacgatattgttgaattagtcaaccatatgcttgacaaacatgtggaagaaaagcaaacacgtagcattaatggagtgaccattcctgctgatttttgttgtcctctttcccttgaactaatgtcggatccagtgattgtggcatctggtcaaacgtatgagcatgtttttatcagaaaatggtttgatctgggatacaacatttgtccaaagacacgccaaatattgggacacaccaaattgattcctaacttcactgtcaaacagttgattgaaaattggtgtgaggtacatggtataatgctaccagatcctgttaaactcttgagtttgtgcttccctgtttccctcaacatcacagatggaagtgcaagtgcagacaagtctggatcaccagaacactgccaattggtagctgcattgcatccaaaagcacagtgcgcatcggatgatagtcatcattataatttgatacatgaaaactctgattcagatgatagagtgtcatcatttggagacacagatgattctgaacctgattctttaagattatcaacagaaactactgcagcaaacaaatctctacttgatgaaaaaactgatcgttctgatggtcttaagcaattgagagacaatggttttcaagtttctgatgaggaacagtatctcgaaaggaatggtaaaagtcatatcagcagccatcatcaacttgaagttgatggagagaatgtcagggtacaagcatcaagtgacatcaatgcatctgaagttatgcaagatgatccggtcaccacatgttcaaaggtatcagataaccctcctagattgggtggtgttcgttctcgaaatcagccaaactggtggagacagtctaataaaactattcctaggatcggattgtcatcttcgacagattcaaaaccagatttttctggcaatgatgctaaagtgcgtaatcttatcgaggaactgaaaagtgattctgctgaggtccaaaggtcagcaacaggagagctccgcattctttctagacacagcttggagaatagaattgccatcgcaaactgcggagcaatccccttcttggtgagtctacttcattctacagaccccagcacacaagaaaatgctgtgacaattctcctgaatttgtcattggatgacaataacaagattgccatagcaagtgctgaggccattgagcctctcatcttcgttcttcaggtgggaaaccccgaagcgaaagccaactcagctgcaactttattcagcctctcagtcattgaagagaacaagatcaagattggacgttccggtgccatcgaaccattagtagatttactgggagaaggtaccccgcaagggaagaaggatgcagctactgcactcttcaatctgtcgatatttcatgaacacaagacccgcattgttcaggctggggctgtcaaccacctggtggagctgatggatccagctgctgggatggttgataaagctgttgctgttctggcaaaccttgcgactgtgcatgatggaaggaatgccattgctcaggcaggaggcatccgagtactggttgaggttgttgagctgggttctgcacgttcaaaggagaatgccgctgctgccctgctacaactctgcacaaacagtaacaggttttgcaccctggttcttcaagaaggcgtcgtgccacctttggttgcattgtcgcaatcaggcacagcccgtgcaagagagaaggttagtattataatcttgtttcctaaaactgacaagctcatttctatcctaaaacttccttcaaacctatacgtatttatgcgcaggctcaggttcttctaagctattttcgcaaccagcgccacgtcagggttgggagagggtaagtctacgcaattaagcagcaatgcggcggtctgattattgttccatgatccttgttggccgggcaattaagagatgtatattccatcctagtcgtagcatattttttctggtagtgattccaaatgattgatgtcacaagttgcttcctgtaaagaagacccatctattgtgtatacatggttttcacgatatttagttcacttctg</dnaseqindica> |
| External Link(s) |
