Os06g0676000

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Revision as of 09:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0676000| Description = Similar to Integral membrane protein OsNramp3 (Fragment)| Version = NM_001188025.1 GI:297725180 GeneID:9267339| Leng...")
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Gene Name

Os06g0676000

Description

Similar to Integral membrane protein OsNramp3 (Fragment)

Version

NM_001188025.1 GI:297725180 GeneID:9267339

Length

5606 bp

Definition

Oryza sativa Japonica Group Os06g0676000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:28936551..28942156

Sequence Coding Region

28936915..28937177,28937263..28937341

Expression

GEO Profiles:Os06g0676000

Genome Context

<gbrowseImage1> name=NC_008399:28936551..28942156 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:28936551..28942156 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcttccttttgctctagttccactcctaaaattcacaagcagcaggacaaaaatggggcagcacacaaattcaaaagccatttctgtgataacatggggaattggttcgtttatcgttgtcatcaacacctacttcctgataacaagctttgtcaagctgcttctccacaacggtctatcgactgtatcccaagtattctccgggatattcggtttcctggggatgctcatatacatggctgcaattctctacctcgttttccggaagaacaggaaagctaccctgccattgctggagggcgattcgacggtccgcatagtaggtcgcgacacggccactga</cdnaseq>

Protein Sequence

<aaseq>ASFCSSSTPKIHKQQDKNGAAHKFKSHFCDNMGNWFVYRCHQHL LPDNKLCQAASPQRSIDCIPSILRDIRFPGDAHIHGCNSLPRFPEEQESYPAIAGGRF DGPHSRSRHGH</aaseq>

Gene Sequence

<dnaseqindica>4980..5242#4816..4894#gccacgacgtcaaccctctctcgtctctcttctcctagccgacgcgacgacgacgacgacgtcgtcggtgtcgcctccgcgcgcgcggcgcgctgctcccctgcacgccgccgccgacccacggagaggactccccacccatcccaggtacggcgcctcgccgcgttctcttctccaggttcgctttgcagaactccctaacaagaaccagatccaacccgaccaccggtaacttctccagctccccatttccgatatttttatggcttggattagctttaatttgtgtagtccgtggcgtgggtttaatcatgtctgtgtttgtggatgtcttacgttgatgggaatgggatgacctcatgtcactcatctccattcttttgtatttccctctttcatgttccctgattctgttttcgttgcgtgtcagtgagccgtgaccctgggaaacacgatgttcgttgctctgtcgctctcttgcctgattctccttggctgatttgtttgctagtgtatcggataaaggctgaagcttgcatttcaattagtacccactggcgatttctatattcttgatgccccgttcatgatcaccgattataatgtctttacttccacaccgcccaatttgctctgacgaatatatctttctgaccaaagcagatttccagtgccaatctttatgtacctcaagtcgcatcaattggtagactagagcaagttaggcagaattgctcttctttttcccccaaatgtacacagtgcatctttctttaatccattgtttgctggtcttcttgttcctggaccttatctcctcatgttagtggctgtggttgttgctatcctgttggaagcttttctcatgtgtctccactgggtgtcatattctcggtacttaagcaactgagacggtgccattgcaaagcgtacctataaataagtccacactcttgcattgtctttgcagctccaagtcttgagggttcttgcattgggagagggggagatgagcggcccaatgcaacgctcgtcgcagccacagtttatctctagcgtcgagcggaacaatcaatcgaatggtcctggcactcctcttattgacagcatagatgttgatcagattgttattccagaggtatgttgtatgtgggttttagttcttgattggttctgaacatagcacatgccacaatgttgctaaatcagttgatataggttatgaaaatagcaaaactgtctccatgccaagcatccaagatttacagttaggcccattcttttctttttcaagataaacctcccatgtgcatctgctgtagcaatgtgtacaatatgcagtgtgtagtttcaaacctgaagtgcatgggaggttaaaaatggaaggaaagcaccaacctagtcaatttgttatgctgtctttttaaatatcttgatatttttcacttcaggatgaagaaactaactactggttgttatatgctattggcagaaaaatagttggaagaacctattttcatacatagggcccggatttcttgtctctattgcgtatattgatcctggaaattgtaagatagctggatttgttgttcactcctattaaatgagtattcacagtgatcatgaccaaaagaatctctcatcttgcagttgagacagacctacaggctggagcacagtacaaatatgaggtgcattactacttctcttctttatagctacttcttttatagtacctatcatatcttctttctcataaagcatgtgacccttgaaattgaatgtatgccattcagatatgtcatgcttatctttaacaaagaaccacaaccgttttcttttgttgccagcttctttggatcatacttattgcgtcatgtgctgctcttataattcaatcacttgcagctaggctaggagtcgtgactggtcagtatcatgagccttgcgacacctgtctttgtttaatggagtatcgttatttcctttcacatggacactgctaatcattagttaagcttttccatatgatagggaagcacctggccgagcattgcagagctgaatatccaaaggctacaaatttcatattatggattcttgcggaactagctgtagttgcatgcgacattcctgaaggtaccagagtgtaaaattttgagcttctgttgcatgacttgcgttttgcatttaatgagttgcagatctaattgaagtataaagttcagctgtttcatgatattgcagacagtgttatactagtcctaaagcaaatctgaattgaaaatagcaatttgtgatgtggaaccattcaatttgtgatagggaaaataacaagacatctgcaactatatgcttcatattgcatctacccactatacctaaccagcctccatggttgcttgttcttttcagtaattggaactgcttttgctttgaacatgctctttaaaatccctgtgtggtgtggtgttctgataactggactcagcactctgatgctactgttactacaacaatatggggtaagaacatgtcctgattttatttcacagtatttgggaccagttaatattttcccttaaatttcaatgccaaagaaaaatttagcctttccttttacttgaaatatcgatacagtatgatacttgccactgccatatagcagcacactacttagaggatccttgtcagcacaaattttgaagatcactaacacaattgcattagttaacagacagtgttttgcatttgtctggttcgtgtagttgctcatatcacatatgatttgtttttgtgcaggtccgtaaactggaatttctgatagctattctggtgtcattaatagcaacttgtttcttagttgagcttgggtattctaaaccaaattcttcagaagttgtgaggggcctttttgttcctgaacttaaagggaatggagccacaggtcttgctatctcactacttggtgctatggtgatgccgtgagcttcctgtccaccccttttgtcccaaacatatctttaactttcgacaaaaacattttccatgtattattcttattacaggcataatctttttctccactcagcattggtactatcaagaaaagtgccacggtcagttcatgggatcaaagtaatgtccaacttcctttattgtatccatttattgttattgtgattttgatcttaattactatccttcatgtgcctgaatttatattttctgttctatcctgaaattttgtatatacagtttgagtgtgtccagtcacatgctaaatattatctaagaaatattggcatgcagatgacataaaaataacatcgtcgtgattaaataattaatttatttcgaccaattcaccttcttgcaggaggcatgtagattctatatgattgaaagtgcatttgccctcacgatagcgttcctcattaacatatctatcatatctgttagtggtgctgtctgcgggtcagataatttgagtcctgaagaccagatgaattgcagtgatcttgatcttaacaaagcttcgtttttgttaaaggttggtcaacagttttgtggtattcatattattgtatttgaaattataggatagactgttcattttgagttagaaaatatttatggttttgttatagacagcgttatatgtatcatgtgataagttggacatatgcacctaactgatttatgagatcttattatttgacaaaaacaccttatgaaccttatgtcttctttcgaaggttcctatgttactgctttttccatgtaaattgtgcagaaacaattctgaaattatctttgtcaatttctgtattgtaatttataatctgatccatattattttatatgttgttatagaatgtcctcggaaactggagctcaaagttatttgcagtagccttgttggcgtctggccagagttctacaattacaggaacttatgcgggacaatatgtcatgcaggttatgcacatcttgtactgaagtcctaactttcaactaggaattttagtggtagaccaatatcttgttgtataattacccacggaggtattcatagttatacatataatcactaggaattttagttgagctttttaaagttataaaattgtaaataaattataaaattaggtttgaatgtctgccagcattgctactttggtagaactagtttttcctgttgaatcaagttgcaaaacaatgcaaggaaatacggagattggggcgcaaccatagacatttgcagcttaatcatggtcaattaggttgtggaaaaaaatggatagaggcgataggtagcttagggcactaccttttgcccagtgtcccacatcatgccaatataggttgctgcttccttgcatatttctaaatgttcaaccaagatagtcttactctttactcttcattgttctttttggcctgtaaaggaaaatcagtatttccagatgtatgaaatgtaatcttctaggggctgacatttactgatttcttcatttaggggtttctagatcttcggatgacaccctggatacggaaccttctaactaggtccttggcaattctgccaagtctgattgtttcgataattggaggttcctcagcagctggacagttgattatcattgcatcggtaattgctaaaatttactatttcaaagtataatacattcatccttctgataatctataatgaacttcaatgcacatgagaattaaattgctccatcccatatgtcaacttttaactaatgccttactttattatgcacagatgatactgtcatttgagcttccttttgctctagttccactcctaaaattcacaagcagcaggacaaaaatggggcagcacacaaattcaaaagccgtaagttgttttccctagaatacataaatatatagcagcaatgccactatgacacatctgaaatgtttttttttcctgaatgcagatttctgtgataacatggggaattggttcgtttatcgttgtcatcaacacctacttcctgataacaagctttgtcaagctgcttctccacaacggtctatcgactgtatcccaagtattctccgggatattcggtttcctggggatgctcatatacatggctgcaattctctacctcgttttccggaagaacaggaaagctaccctgccattgctggagggcgattcgacggtccgcatagtaggtcgcgacacggccactgaaggagaaggttctcttggccatctgccccgggaggacatctccagcatgcagcttcctcagcagcgaactgcttctgatctcgattagaaagatggcatacaaatactcaaatcaatcaccaaagaaatataccactgatgataatcatgcagctagtagctacctacatagcccaaagagttagccagctgatccctcaggtattcacctggatcatcctagtgaatactgcatactactaattccacatatatagtgacaataattttgtcttgatatctggtactgccgattgtacacgatggttagctaactgtgatcctgtgacaccaaagcttcttacttagaatcttatacatttcg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0676000, RefSeq:Os06g0676000