Os06g0677300

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Revision as of 09:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0677300| Description = RINGv domain containing protein| Version = NM_001064890.1 GI:115469511 GeneID:4341836| Length = 4294 bp| Definition...")
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Gene Name

Os06g0677300

Description

RINGv domain containing protein

Version

NM_001064890.1 GI:115469511 GeneID:4341836

Length

4294 bp

Definition

Oryza sativa Japonica Group Os06g0677300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29010803..29015096

Sequence Coding Region

29010946..29010993,29012015..29012467,29012642..29012816,29012912..29013206,29013369..29013441
,29013545..29013635,29013996..29014075,29014169..29014405

Expression

GEO Profiles:Os06g0677300

Genome Context

<gbrowseImage1> name=NC_008399:29010803..29015096 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29010803..29015096 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaaagcggaggagggccagtcttcggagcccgccgattccgcggcaccagcccaggatgacagtgtgcaaactgcatctgggcataattcgcgaaggccaaacctttctttgcaaataccagctaggaccctggataaccaaataggcacttcagcgagaattaatatatcccctagccccagctcaacgagagcaggattgcccccgaggcctaattcaactagaacaaaatcttctctgaagagcatcattccgcaacagagtttcagggcgagaagttcagcacaggaaggtgatcgggcgatccttctggttcctgggacaccatcagaagggcagcaggataatacatcaacgttgagatcattttcttttagaaaagtcataaactcattatccgcaaaacgtacacattctttgccagtcacacctatagcaacttcagacaaaacttcttctccggcaaatcagatcaacaacctaccaaccacagatgatcaagatgttcaagcaagaattaggcgctcactttcagtaccaggaaatcgtaaaaacaggagtttgaggagggcggattcattaggtgtcatccgtgtgattccaacaactccccgacctatcccagttaatacaactgcatcaagtgatgggattgaggagacagtggatgttcctggagatggaggcaaagatatccctgaagaagaggcagtctgcagaatttgtctagttgaactaaatgaaggaggggaaacacttaaaatggagtgcagctgcaaaggggaacttgctcttgcacaccaagactgcgctgtcaaatggtttagcatcaagggaaacaagatatgtgatgtttgtaagcaagaagttcaaaatttgcctgtcactttgttgagaataccaactcaaactgctaataggcgagtaacaaatggtgctcatcaaagagcctctcaacaatacagattttggcaggacattccaattttggtcatggttagcatgcttgcatacttctgcttcttggaacaacttctggttacagatttgctgtcacacgcactggcaatttcgttgcctttctcatgcgtgttgggcctcctttcttccatgatagcatccaccatggtaaccaagagttatctatgggcctatgcttcgttccagtttgctattgtgatactgtttgctcatatcttctacaatgtgttaaaagtaaatccagtccttgcggtcctactatcctcattcactgggtttgggattgctatcagtgcgaactcaatgctagtggaatacttgaggtggagatctaggaggaatcaacagctagctcaaactgtcgatgatggtcagcgacaagaacctggaagtaatgctgtaaatgaaaacaatggtgatagacagcaagcgcagcatcgagaatctggagataacattgtatga</cdnaseq>

Protein Sequence

<aaseq>MDKAEEGQSSEPADSAAPAQDDSVQTASGHNSRRPNLSLQIPAR TLDNQIGTSARINISPSPSSTRAGLPPRPNSTRTKSSLKSIIPQQSFRARSSAQEGDR AILLVPGTPSEGQQDNTSTLRSFSFRKVINSLSAKRTHSLPVTPIATSDKTSSPANQI NNLPTTDDQDVQARIRRSLSVPGNRKNRSLRRADSLGVIRVIPTTPRPIPVNTTASSD GIEETVDVPGDGGKDIPEEEAVCRICLVELNEGGETLKMECSCKGELALAHQDCAVKW FSIKGNKICDVCKQEVQNLPVTLLRIPTQTANRRVTNGAHQRASQQYRFWQDIPILVM VSMLAYFCFLEQLLVTDLLSHALAISLPFSCVLGLLSSMIASTMVTKSYLWAYASFQF AIVILFAHIFYNVLKVNPVLAVLLSSFTGFGIAISANSMLVEYLRWRSRRNQQLAQTV DDGQRQEPGSNAVNENNGDRQQAQHRESGDNIV</aaseq>

Gene Sequence

<dnaseqindica>144..191#1213..1665#1840..2014#2110..2404#2567..2639#2743..2833#3194..3273#3367..3603#gatggaaaaaaaaaagaaccatttgcaaattgcaaaaacgtcctttctccagttctcctcccctgagcttctcccaacaagaacacccacttgctctcttcccctctctctctcgcccctcgaattctggcggcgaagcgtacatggacaaagcggaggagggccagtcttcggagcccgccgattccgcggtgaggttctcccaccccaagcagctcgactcgcgtttctttcccccgactttccatgttctttctaggatagttttcgagtagttcaacttctgatggtttcttggttccgtatgggggatggcgagacaatctgttcagacctgttatcgctgggtgttgcagtttaaatccgtctcttaatttcgttgatcagaggcgaaagttgcgaagctttgagggtgaattgtggcggagttggtggaatgtttgtggatgctcttttgccgcatcttttttttattctcttttttggaagatttgattttttagggaagatcgaatgatttgtttcttgctttttccctttattagggcaggtttcctcgattgtagtgaaaagctcgtgtttgcctaccctggttttccttgtactttgtcacatgagctaaaattatactagattctacagtagtaggtttgctggcctttctgacgaaattgcatcactgaagtgtattgctataagtgtgattatgtgggtgctaatcttgatttcttcttgtgaaaatgcgttttaagtttgttgaatacatagtcttaggatcgggagaccagttgtttgtaattccatcacacaaattatctaggttacagctaatccaagcaaggtaagattggtaatgatatgttcagttaggtaggtagagaatgaagtaggatggacagtagagatcatagctatgttttcgtcaaattcttaatgtgcgaatttgaagttttggactcaatggaataaataaagccctaaacaattgacccataaggccataaggtacatgtctgctggtgctactccatgtgtgctcggtagctcagatgattgccatgagcttcattaaattgtatcggctcaagaatcactatttatccctgatgattgatgcctttaccttgttcatattccattagtcttgcaagtttaatttaatggaatttatgtagcatagcttgctgataatactgtttgctgactttgtaggcaccagcccaggatgacagtgtgcaaactgcatctgggcataattcgcgaaggccaaacctttctttgcaaataccagctaggaccctggataaccaaataggcacttcagcgagaattaatatatcccctagccccagctcaacgagagcaggattgcccccgaggcctaattcaactagaacaaaatcttctctgaagagcatcattccgcaacagagtttcagggcgagaagttcagcacaggaaggtgatcgggcgatccttctggttcctgggacaccatcagaagggcagcaggataatacatcaacgttgagatcattttcttttagaaaagtcataaactcattatccgcaaaacgtacacattctttgccagtcacacctatagcaacttcagacaaaacttcttctccggcaaatcagatcaacaacctaccaaccacagatgtaagtatatacatttttgttctgcattttttataagaattccagatagatggtacagctagatagtagtattttcatgctaccagtcggaaatgggcttactgccttacagtatgttgcgcaaatatttgtagttttactaagttttctttaaatggtttttgatgtttgcaggatcaagatgttcaagcaagaattaggcgctcactttcagtaccaggaaatcgtaaaaacaggagtttgaggagggcggattcattaggtgtcatccgtgtgattccaacaactccccgacctatcccagttaatacaactgcatcaagtgatgggattgaggagacagtggatggtatcttcacttctaagactttactgcatcattttaataggacaaattgtttgcttctgaaacagaattggttcactttactgaattcttgacagttcctggagatggaggcaaagatatccctgaagaagaggcagtctgcagaatttgtctagttgaactaaatgaaggaggggaaacacttaaaatggagtgcagctgcaaaggggaacttgctcttgcacaccaagactgcgctgtcaaatggtttagcatcaagggaaacaagatatgtgatgtttgtaagcaagaagttcaaaatttgcctgtcactttgttgagaataccaactcaaactgctaataggcgagtaacaaatggtgctcatcaaagagcctctcaacaatacaggtaaacgtgctttagctgtcttgatttatgaattgttgaaaaaggaagtactgttttcaaattattttttttcgtggtagattcactcttgaaaaaaataaataaataagcattctgtgatcattttgcacggttgtgaaatttaactttcagttataacagattttggcaggacattccaattttggtcatggttagcatgcttgcatacttctgcttcttggaacaacttctggttagggtctcattcttatttatatgcatgcagaatgtcccactctgctttttcttagcttgtgaaacctctctaaatggtgttgattctttaactgaaacaggttacagatttgctgtcacacgcactggcaatttcgttgcctttctcatgcgtgttgggcctcctttcttccatgatagcatccaccatgggtaatgcactgtcatctttaccgttcaaaattattgtagttcgcacttacaatgccataagagtagttaatgtatagagaaactaagggcatttcaagctttcagtatttaataagtggtagaagacctaaactgtagtaatcacccactgttcaggtctgtagtctgtactccaaatttttatctagtttgttaacttgtgtagtgagttcaaaacttgtaataggaaaataatggtagtttaaacgatttcagtatttctgcagaagtaaattatacctacaaacttagggttcattatttgttgcctttggactccttgcaaccatgacaatccgatatttctttttgtccgtacagtaaccaagagttatctatgggcctatgcttcgttccagtttgctattgtgatactgtttgctcatatcttctacaatgtggtaagaaattatttcccatgattacatttgatgcagctaatgtatttcatcactctgctcattatcaatttatcatcatcttaaaacttgcagttaaaagtaaatccagtccttgcggtcctactatcctcattcactgggtttgggattgctatcagtgcgaactcaatgctagtggaatacttgaggtggagatctaggaggaatcaacagctagctcaaactgtcgatgatggtcagcgacaagaacctggaagtaatgctgtaaatgaaaacaatggtgatagacagcaagcgcagcatcgagaatctggagataacattgtatgacaattcaggtttgttatttaagacatttatcaagaatctaagacatatttatcacatttttaacaagagacgaaaacttccactgatatttatgcatatcctcactgggctttcgctgttgaattgtgcagattaagaagcgcaatgaatgtgaatagctagctttgatatgttcagtaggtttagctcgtcgaacttcagaatcacctatgcaagaataggaaacatggagcaaatttccaatggcgacagcataagatgataagaggctatgtgacaagtgagaacatggagaatgcggcggatatagttaggcaacacagagagctgaaccaaactatccattgtacacggtattaatttagcagtttgacatcataaggtgtggtttgttcagtgtaagtttagtagttctggtcgtctggtattacaaaattacatcacgaaagtgagtgcagctagtggctagccatacagatatatatacaggtataggtatgtgaaatacagttataccagcttttacagttctgtagtctgtgtgaggagaaatgtgaaggcagagaattttagataatgacatatttcagagttctgaacttagaaattattcgggtaaaaaaatagagaagaactgtatgcagtgcgtggggattgaattgaaatgaaatatggaaatgatgttcgcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0677300, RefSeq:Os06g0677300