Os01g0901800

From RiceWiki
Revision as of 19:03, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0901800

Description

Acid phosphatase/vanadium-dependent haloperoxidase related family protein

Version

NM_001051648.1 GI:115441666 GeneID:4325009

Length

2548 bp

Definition

Oryza sativa Japonica Group Os01g0901800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41022628..41025175

Sequence Coding Region

41022916..41022993,41023309..41023401,41023572..41023622,41024069..41024225,41024963..41025099

Expression

GEO Profiles:Os01g0901800

Genome Context

<gbrowseImage1> name=NC_008394:41022628..41025175 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41022628..41025175 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgacgacggtggtggtgatggcggcgcctcctccgcgggattctcctacttcgccgtcttccacaactaccccctcgtcgccgccttgctgggcttcgccgtcgcgcagtccatcaagttcttcgtcacccggtataaggagaacagatgggatcctaagcagcttatcggttctggtggcatgccatcgtcacattctgccacagttacagcactagctgtagcgattggcttccaagatggttttggctgtgccctatttgcgacagcagcaatattcgcaagtgtggttatgtacgatgcttctggtatcagattacatgctggaaagcaagcagaggtgttgaatcaaatagtctgcgaacttccttctgaacatcccttgtctgaaacaagaccattgcgtgaactcttaggccatactccaacccaggttgttgctggagctttgcttgggtctatgctagcaacagcagggcaaatgttccttgtagtatcaggttctgtatga</cdnaseq>

Protein Sequence

<aaseq>MGDDGGGDGGASSAGFSYFAVFHNYPLVAALLGFAVAQSIKFFV TRYKENRWDPKQLIGSGGMPSSHSATVTALAVAIGFQDGFGCALFATAAIFASVVMYD ASGIRLHAGKQAEVLNQIVCELPSEHPLSETRPLRELLGHTPTQVVAGALLGSMLATA GQMFLVVSGSV</aaseq>

Gene Sequence

<dnaseqindica>2183..2260#1775..1867#1554..1604#951..1107#77..213#ggattaggcgaggagagggaaggaaggagggagggaagggacgcaccttggggggtgggaaggagaagggagagccatgggcgacgacggtggtggtgatggcggcgcctcctccgcgggattctcctacttcgccgtcttccacaactaccccctcgtcgccgccttgctgggcttcgccgtcgcgcagtccatcaagttcttcgtcacccggttcgtacgccctctgccccctcctcctcgcgacctcaattcgaatctcatggggggattcggatgatgttcggtggaactccggtttcctctcccggagatctgatccggccgtcagaacaatcggtttcgattcttttttttctttttgcttgcttagaagaatggtggaattgagaatgttaggattccgtatagatttattatcgaatgatttcggggagtttgagatggggggcaaaggaattgccggtgatctcttcggtttaagaaccgtttaaaggagaataggtgccatttagatttgcttagatttaatgtgcgttttattcatggctagactacaatcgacaatttgacatgttattgtgtgcatttgagaaattggagtactttcacaagtgagaaaattataggtatgaattttcttgcttgacattgttttgttatccgatttccactttggattagcaagtagctcgatggtgattgttgtgccatttgagccaattgcagaggatacaaaagcattgtttattctttgtataaaaaagttttctttgcgcgcattgtaaatcttaactatatcttaattcgggtagaaggacatagattttgttcattgacatcagcctgatgcaagatgagcaatgtatcttgtgacttagttctcattatgtccttttatgatagaaaatattgcaacaagtttaatgtgtgtttgttctgaaattaaggtataaggagaacagatgggatcctaagcagcttatcggttctggtggcatgccatcgtcacattctgccacagttacagcactagctgtagcgattggcttccaagatggttttggctgtgccctatttgcgacagcagcaatattcgcaagtgtggtaggttatccatctcgtatcctgtttaattagttcaatcgagttcctttgttctgacaaagacaacgagcattgatggtgttgcttggactcaatttcttgcctcgacttggacaccatgatgttgagtgtaggcattgtgcaagagtttttgttgatttcctgtttgttattattaaacatgtagtccccatcgtttcgcttattgactgaaggacatagattttgttcatatttacaaacgaaaaaaaaattgtgaataaaacttttatatacgtgttcttagcaatctaaaagcaaaggctgaaaaataaacttcgatgaacaaaccctaaaatcaacttcaaatttaaggttgaaaattcaaattttggctgataagcataagcataaacgaaaagatgaggctcgagggttcataatttctgttgtgacttgattggcaggttatgtacgatgcttctggtatcagattacatgctggaaagcaagcagaggtatgcagttactgtttctttatgtgttaatatcaatatgaacatgctaatatcatcatgagacaccttttaacaccatgtattagatttgcctctattgtaatgacacaaagaaagatatttgtttgtgcagttatactgaactgtatctcatttctaactatattcaggtgttgaatcaaatagtctgcgaacttccttctgaacatcccttgtctgaaacaagaccattgcgtgaactcttaggccatactccaacccaggtttgctcaaatgccattttcactaatcattttattatactgcaccaatcgaaagcgatgtcatattgattgtgctgattacgtggataccaactgaaccacaaactggctgtgccaatgtcatcagatccccttttacctagcaccccatgcttatcagttatcgtcacatcatgcagcttcgtcagcagtgctaccatcttcttgtttctttcagtcatggccaactattttgtatgctatctcaaaaaaaaaaaaaaaaaaaaatctattttgtatgctgctaacttctttgggtgttaaaacttgttccaggttgttgctggagctttgcttgggtctatgctagcaacagcagggcaaatgttccttgtagtatcaggttctgtatgatgctgtgtttgaaggtggatgggaattgctagcatttgaaggggacttgagaagaagaagaagaggcttctccagtgtcctgtcacttaggtattggtaagatttgtaacaatgagatgttgtggtgctgttgaagttttgacggcacgtgatacatgtatgttcaggtgatgtacttctcaggatttttgtacagaatatttgttcgataacttcattattctggtgaaatctaaaatgtgagtatgtcagtgatggttgttgatctaccattttgttatatttggt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0901800, RefSeq:Os01g0901800