Os06g0677700

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Revision as of 09:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0677700| Description = YT521-B-like protein family protein| Version = NM_001064894.1 GI:115469519 GeneID:4341840| Length = 5046 bp| Defini...")
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Gene Name

Os06g0677700

Description

YT521-B-like protein family protein

Version

NM_001064894.1 GI:115469519 GeneID:4341840

Length

5046 bp

Definition

Oryza sativa Japonica Group Os06g0677700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29028362..29033407

Sequence Coding Region

29028362..29028720,29029267..29029689,29030668..29030830,29030926..29031036,29031550..29031618
,29031772..29031858,29032622..29033407

Expression

GEO Profiles:Os06g0677700

Genome Context

<gbrowseImage1> name=NC_008399:29028362..29033407 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29028362..29033407 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgacggcgacctcagcttcgacttcgagggcggcctcgaccagccccccgccggcggcggcggcggccccgcgccgcactcgtccgaccccgggggcgtgggcgggggcggcggcggcggcggccccggggatggcggcgggcacggccgcggccgcggccgcggcagctaccggcagacggtgtgccggcactggctccgcggcctgtgcatgaagggggaggcctgcgggttcctgcaccagttcgacaaggcccggatgcccgtgtgccgcttcttccgcgacttcggcgagtgccgcgagcccgactgcgcatacaagcactcctacgacgatgtcaaggagtgcaacatgtacaagatgggcttttgccctaatggtcctaattgccggtacaagcatgttaagctaccagggccaccacctcctgttgaggaagttctgcagaagattttgcagattcgctctttcaataaattcaatcagcataggcacaataactataatcagcaaggggagagacctcaacatccacagggttcaggtttacctaaccaaaatagtatagataatactacaaccacaaccgctcagcctgctgttggacagcaagcacaaactacaaatcaacagccaccacagcagcagcagcagcaacaacaacaacaacaacaacaacagaagccaaatacaaatgaccaagtccaatctgttccaaatggctcgtcgaatcaagccactagaattgcaacgccccttccacaagggccatctaggtacttcattgtcaagagttgcaatagggagaatctggagatatcagttcagcagggcatttgggctacccaaaggagtaatgaggctaaacttaatgaagcctttgaatccattgagaatgttattttgatattctcaatcaatagaactcgtaatttccagggttgtgcaaagatgacttctaggattggtggctacattggtggtggaaattggaaatctgctcatggaacggcacattatggtcggaacttctccatacaatggcttaagctctgtgaactgtcatttcagaaaacacatcatctgcgcaatccatacaatgacaatctccccgttaagatcagccgagattgccaggaattagaacccttcattggtgagcaattggcttcactgctttatctagaaccagacagcgagctgacggctatactaattgcagcggaggccaagaaagaagaagaaaaggctaaaggagttagtgctgatgaggcagctgacaatcaagatattgtgctgtttgatgacaatgaagaagaggaggaagaggaaagcgaggaggaagaagagggcaatggccaagaatctcaaggaaggggaagaggaagagggatgatgtggccacctcaaatgccaatgctgcgtggtgttgggccaatgatgggagggcgtggcttccctcccaacatgatcggcgacggttttggttttggtggtggttttggtatgcctgatccttttggtgtgcctcgtggttttcctccatttggcccaagattccctggtgacttcgctagaggaggtcctatgcctggtatggtcttccccggcaggcccccacaacctgggggcatgtttcctatggggctagaaatgatgatgggtcctggtcgtggaccgctaatgggaggcttgggaatgggtgggcctggacggccaaatcgacccgttggtatggctcccttcatgcccccaccacctccaccaaataaccgtggcacgaagcgggagcaaagaaggccaggtggtgagaggggtgacaggtatgagacaacttcagatcagggaagcaggggtcatgacgccactgggaattctggagcagaaggagccaggtcgcagtctggggacagatacggtagaagcgccctccgagacgatgacagtgagagtgacgaggaagcagcgcccaggaggtcgcggaaacgataa</cdnaseq>

Protein Sequence

<aaseq>MDDGDLSFDFEGGLDQPPAGGGGGPAPHSSDPGGVGGGGGGGGP GDGGGHGRGRGRGSYRQTVCRHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDFGECR EPDCAYKHSYDDVKECNMYKMGFCPNGPNCRYKHVKLPGPPPPVEEVLQKILQIRSFN KFNQHRHNNYNQQGERPQHPQGSGLPNQNSIDNTTTTTAQPAVGQQAQTTNQQPPQQQ QQQQQQQQQQQKPNTNDQVQSVPNGSSNQATRIATPLPQGPSRYFIVKSCNRENLEIS VQQGIWATQRSNEAKLNEAFESIENVILIFSINRTRNFQGCAKMTSRIGGYIGGGNWK SAHGTAHYGRNFSIQWLKLCELSFQKTHHLRNPYNDNLPVKISRDCQELEPFIGEQLA SLLYLEPDSELTAILIAAEAKKEEEKAKGVSADEAADNQDIVLFDDNEEEEEEESEEE EEGNGQESQGRGRGRGMMWPPQMPMLRGVGPMMGGRGFPPNMIGDGFGFGGGFGMPDP FGVPRGFPPFGPRFPGDFARGGPMPGMVFPGRPPQPGGMFPMGLEMMMGPGRGPLMGG LGMGGPGRPNRPVGMAPFMPPPPPPNNRGTKREQRRPGGERGDRYETTSDQGSRGHDA TGNSGAEGARSQSGDRYGRSALRDDDSESDEEAAPRRSRKR</aaseq>

Gene Sequence

<dnaseqindica>1..359#906..1328#2307..2469#2565..2675#3189..3257#3411..3497#4261..5046#atggacgacggcgacctcagcttcgacttcgagggcggcctcgaccagccccccgccggcggcggcggcggccccgcgccgcactcgtccgaccccgggggcgtgggcgggggcggcggcggcggcggccccggggatggcggcgggcacggccgcggccgcggccgcggcagctaccggcagacggtgtgccggcactggctccgcggcctgtgcatgaagggggaggcctgcgggttcctgcaccagttcgacaaggcccggatgcccgtgtgccgcttcttccgcgacttcggcgagtgccgcgagcccgactgcgcatacaagcactcctacgacgatgtcaaggagtgcaacatgtgagatcctcgatcccccagatttcgttttgctatgttataagtttttagcgtatctttgatccaggggtaagatattcatcactgtgaatgattcgtttgttagctcttgggttggaggtcttgtgtagttgacgaaatttttgggtggaatttagcaagtgcgatctcttaacttggccgcgattgagtctgcgtgtctttgtggttgtcaacctggctgtcaatgggtataatcacctattgattctctgttgtttgattccatttggtagagtttagtgaactctgtttgttttctcattgttgctcatagaagcttactttcaagatactatggaaatgccatgtagttgacattttgttgcaatgttaataaccatatcatttatggaacatggtagagtgatagatgatggaactgtcatacagatgcaccatcacagaaaaggagtttgtttattgtggtagtcatgtgtttaaatgaatatgatgttactgaaaaatatatctgacacttatatgttaacctgtgctgctttgcaggtacaagatgggcttttgccctaatggtcctaattgccggtacaagcatgttaagctaccagggccaccacctcctgttgaggaagttctgcagaagattttgcagattcgctctttcaataaattcaatcagcataggcacaataactataatcagcaaggggagagacctcaacatccacagggttcaggtttacctaaccaaaatagtatagataatactacaaccacaaccgctcagcctgctgttggacagcaagcacaaactacaaatcaacagccaccacagcagcagcagcagcaacaacaacaacaacaacaacaacagaagccaaatacaaatgaccaagtccaatctgttccaaatggctcgtcgaatcaagccactagaattgcaacgccccttccacaagggccatctaggtgtgtgtggagtttctagtaaatattgtaaagcttctagcatactctgaaaatgatacacgtagtctcagactctcagttacgatagaacatagtattaaacagcaaatatgttatctcttctgacatttggtaataaaatgtacttatttgtgaaatctctttttgcattctcctagacagactgatagcaaaatgttgtgatcatctttttgctaattacacaagttgctagttattattatttctttttctcggtactgttaactagttgtagctacctcaaggttggttccacattgtttagcactttagaagaagtgtgcttcctatcaatctatcattgttgccaagtttaaactttgtatagtaggatttcatgatgggaagtttgagtaaggataccacatgaaagtttcataaacagttagttttgaaaaaatatgatctggtaagccatagcatgccgtgtccatggtagtagcaagcctcggcaatttctggagggaatatacattttactttgacctatggaatttaaatgttgtatgctttagttcaaattagtgcttgtgttgttctcagattgaaccaactatgtagttatttggttattagctattacactgatgctggtgtagattttggcagcctatatttatagtctttctgagtctctcaacgatgtgctttagtacttagaaatccaacatctcatgcaatgtctaaattgtcaatattgcaaaaccaacagctttcacttgctactatccttgtggccaaataattgttagtattttattacctaatgttttgtatagttaaaggtagcattcacccttatcttggtactcccatcgggaataacttaatgcttttccagctagaagttctgcttgattgtttcatggtgtcaagtgtcttctggtactataatagttctctaatcaagtctttggttggtaatgtaaaaatcaggtacttcattgtcaagagttgcaatagggagaatctggagatatcagttcagcagggcatttgggctacccaaaggagtaatgaggctaaacttaatgaagcctttgaatccattgagaatgttattttgatattctcaatcaatagaactcgtaatttccaggtaaagtggaggtttcattttccctatgaatattgaatgtgtattgggaatgacagtttgaagtcatactacttaaccatgttatgtttttcaagggttgtgcaaagatgacttctaggattggtggctacattggtggtggaaattggaaatctgctcatggaacggcacattatggtcggaacttctccatacaatggcttaaggtacacctttctttgtactactgtttttaattgtagctcatggaacatagggccttagttatgataaagcaaattatatggtcgtgaattgttatcacactacatagaaatatggtcctcataattttgataacgctagctggtactgctaaagatacaatactagcttaactaaatttccctcccggatattttaaactgctgagacaagattatgaagatgttattactgagcaaatatcaaatatctacggtcttcattagcttgctatgaaattctttaggttcagattatctattcataatggatattctgtccgttcatttgacagataaatagctagatcttttgttggctttagccctttcaaagtttctagcatgttgatgaatcttatattaaactgttgattgcaatggtgtctattgatttatcttgtatcttttatacgtgaacatattatgttttctatcatcattgtgcatctgtttacaacagtttttgcactgcagctctgtgaactgtcatttcagaaaacacatcatctgcgcaatccatacaatgacaatctccccgttaaggtatggcgcatcactaactaaatgctacttctgtatatgattatggaagaaagttatgcaatggtgtgctccttaggtttcagcatgtaattcttcatccaaatccttgagagttcatgactgaactgcttaattcacttttggcttatgcagatcagccgagattgccaggaattagaacccttcattggtgagcaattggcttcactgctttatctagaaccagacagcgagctgacggtatgccatgcatttcttaatttttattaaatcagaatttcatactaaattattatggcgaacatctctatatgcattagcttccttttttcttgtgggcattcctccagcttacaccattgcagttaacaccacaattgggttacacatgactttgctttgggctaatatcctgcaataatgatcatggttctaaattgcagatatgtagaaaaaatccatactgtagtatcgtttgctgttgtcaagtcaatgcctgttgatgtgttgtcacacttgtgatgtacttcttagactaatccaatcatgatgaaggaaccataattcaaaaaacaccaccatatttaagttgtcagaattgttttggaaagaaatagagggcaaagacacagcaattattatcttgcagtgttaaggaaagataacaactgcatcctctaggttgactaaaatttaaaggacgatttgcttgcatttagtcagataggaattacctttgggttcagaacacactctcttataaagataaactgcaatagcaagttttatggttgccgtactgttttactggaagaaagatattgtggtaaagtgaataattgttattatgatctatcttgagctgactgattccttgtctaaggcgtaaatgatttatctacttgcttttaaaaacatttttccatgtactgctttttcttattttgacctattgaggtgatgtaatgcccaccgctggctgatattttttatcttggtttaggctatactaattgcagcggaggccaagaaagaagaagaaaaggctaaaggagttagtgctgatgaggcagctgacaatcaagatattgtgctgtttgatgacaatgaagaagaggaggaagaggaaagcgaggaggaagaagagggcaatggccaagaatctcaaggaaggggaagaggaagagggatgatgtggccacctcaaatgccaatgctgcgtggtgttgggccaatgatgggagggcgtggcttccctcccaacatgatcggcgacggttttggttttggtggtggttttggtatgcctgatccttttggtgtgcctcgtggttttcctccatttggcccaagattccctggtgacttcgctagaggaggtcctatgcctggtatggtcttccccggcaggcccccacaacctgggggcatgtttcctatggggctagaaatgatgatgggtcctggtcgtggaccgctaatgggaggcttgggaatgggtgggcctggacggccaaatcgacccgttggtatggctcccttcatgcccccaccacctccaccaaataaccgtggcacgaagcgggagcaaagaaggccaggtggtgagaggggtgacaggtatgagacaacttcagatcagggaagcaggggtcatgacgccactgggaattctggagcagaaggagccaggtcgcagtctggggacagatacggtagaagcgccctccgagacgatgacagtgagagtgacgaggaagcagcgcccaggaggtcgcggaaacgataa</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0677700, RefSeq:Os06g0677700