Os06g0679400

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Revision as of 09:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0679400| Description = Similar to Myb-related protein Pp2| Version = NM_001064903.1 GI:115469537 GeneID:4341850| Length = 2760 bp| Definit...")
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Gene Name

Os06g0679400

Description

Similar to Myb-related protein Pp2

Version

NM_001064903.1 GI:115469537 GeneID:4341850

Length

2760 bp

Definition

Oryza sativa Japonica Group Os06g0679400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29147173..29149932

Sequence Coding Region

29147478..29147743,29148492..29149242,29149329..29149655

Expression

GEO Profiles:Os06g0679400

Genome Context

<gbrowseImage1> name=NC_008399:29147173..29149932 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29147173..29149932 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaggagcggcggcggcaatggtgggggagaaggtggcggcggcggcggcaatggcggtggcgggggagggttgaagaaggggccgtggacgcaggcggaggacaagctgctggtggaccacgtgcggcggcacggcgaggggaactggaacgccgtgcggcgggagaccgggctgcagcgctgcggcaagagctgccgcctccggtgggccaaccacctccgccccgacctccgcaaggggcccttctcccccgacgaggagcgcctcatcctccgcctccatggcctcctcggcaacaagtgggctcgcatctcctcctacctgcatgggaggacggacaacgagatcaagaactactggaacacgcggctcaagcggcgggtgcgcgccggcttgacgccgtacccgccggagatcgagagggagatcgcgcacctccgcgcgcagaatctcaacctgtccgccgaaggcggcggcggcggcggcggcatgctgccgccgccgctcctcctcgacccgagcaacccgttcgccttgcagcaggcgccggtggtggcgccgtcgccgtcggcgtcgcaggcgaattcgccgccgctgatcaaccagaattacccgctcctgaaccagatgcaggggctgcagcttctccacctcgccaaccaccagcaggcgccgccgccgcagcagcagcagcagcagcagccggcgttccaccaccaccacgacggcggcggcggcggcgggttcgtctcgtcggggctcccgccgctgccgaacagaccgcgcgagctcccttcgaaccaattcgagacggcgacgagcggcggcggcggcggctgcgacgcgctgctcgagtcgctgctgctcggcgacgaccacctcctgccgcggcccaaccccgccatgctcagggtgggctccatgcccgagctgatgtaccgcgagcctagctcaagccacgtgctccatggcggcggcggcggcggaggcgccagcgacagtgacgtcacctcgcagtatcctccgggagaagaggacccgcattatggcgggagatgggacttcatcttcgaggacgtgaaacccaagaggaaggcggcgagcgcggtggaggagatctccggcatgttcggcatcgccccgggctccatcccgggggaatggttcaaccccggcggcgtcggcagcgccgccgccgccgccggcgggtcgtcggctccgtctccggggccgtcgtccgtcgtcaccaccgacgacgacttcaccctcgagatgcagcagatcatgtcgtcgctgccgctgcttcaacctgaagagcatcataactggaacgcataa</cdnaseq>

Protein Sequence

<aaseq>MARSGGGNGGGEGGGGGGNGGGGGGLKKGPWTQAEDKLLVDHVR RHGEGNWNAVRRETGLQRCGKSCRLRWANHLRPDLRKGPFSPDEERLILRLHGLLGNK WARISSYLHGRTDNEIKNYWNTRLKRRVRAGLTPYPPEIEREIAHLRAQNLNLSAEGG GGGGGMLPPPLLLDPSNPFALQQAPVVAPSPSASQANSPPLINQNYPLLNQMQGLQLL HLANHQQAPPPQQQQQQQPAFHHHHDGGGGGGFVSSGLPPLPNRPRELPSNQFETATS GGGGGCDALLESLLLGDDHLLPRPNPAMLRVGSMPELMYREPSSSHVLHGGGGGGGAS DSDVTSQYPPGEEDPHYGGRWDFIFEDVKPKRKAASAVEEISGMFGIAPGSIPGEWFN PGGVGSAAAAAGGSSAPSPGPSSVVTTDDDFTLEMQQIMSSLPLLQPEEHHNWNA</aaseq>

Gene Sequence

<dnaseqindica>2190..2455#691..1441#278..604#gtctttctcctcctcgccagggaaaggcccccccgccgccgccgtcgtcgttccagctatagctttccccgccggcggtggcgatcgatcgatcctctcctcgtcggttgattagggtcaagaattcttccctctcccagcttggttgaatttcttggtttgatcaaggggaggaattaattgagaggtgaattagttcgccggagtttgtttctctctctctctcctcttctctgagctgagagggggaggagagaatcaagtgacgagttatagtatggcgaggagcggcggcggcaatggtgggggagaaggtggcggcggcggcggcaatggcggtggcgggggagggttgaagaaggggccgtggacgcaggcggaggacaagctgctggtggaccacgtgcggcggcacggcgaggggaactggaacgccgtgcggcgggagaccgggctgcagcgctgcggcaagagctgccgcctccggtgggccaaccacctccgccccgacctccgcaaggggcccttctcccccgacgaggagcgcctcatcctccgcctccatggcctcctcggcaacaagtgggctcgcatctcctcctacgtaagcaacaacccatctaatctctaatttctttctctctcgagtttgatcaatcatggcggtggcgtggtgttcgtggcgtgcagctgcatgggaggacggacaacgagatcaagaactactggaacacgcggctcaagcggcgggtgcgcgccggcttgacgccgtacccgccggagatcgagagggagatcgcgcacctccgcgcgcagaatctcaacctgtccgccgaaggcggcggcggcggcggcggcatgctgccgccgccgctcctcctcgacccgagcaacccgttcgccttgcagcaggcgccggtggtggcgccgtcgccgtcggcgtcgcaggcgaattcgccgccgctgatcaaccagaattacccgctcctgaaccagatgcaggggctgcagcttctccacctcgccaaccaccagcaggcgccgccgccgcagcagcagcagcagcagcagccggcgttccaccaccaccacgacggcggcggcggcggcgggttcgtctcgtcggggctcccgccgctgccgaacagaccgcgcgagctcccttcgaaccaattcgagacggcgacgagcggcggcggcggcggctgcgacgcgctgctcgagtcgctgctgctcggcgacgaccacctcctgccgcggcccaaccccgccatgctcagggtgggctccatgcccgagctgatgtaccgcgagcctagctcaagccacgtgctccatggcggcggcggcggcggaggcgccagcgacagtgacgtcacctcgcagtatcctccgggagaagaggacccgcattatggcgggagatgggacttcatcttcggttagttcatccaaaaatttcgaaattttattttcatttccacatcgataaaaaaaagttcgagcaatttttgtgaaattatatatacttttcattctataaatgaaaatttatatattaaactacagatttatggtgcttatcacgaagctacagattggccattttatcttaaatacatatcgcagttatcacaaaactacatattaaacatcaatcataacacaaaactacaaagtttattttaagtttctaaactctaaattccatattttccagatagcccgtcttagatttgtcatcatattttttccgatggtttgatcaaagtttattttttctcgaacggtcagttgttgtcgacgttttatatttaaaagaaaaggatgtcctattttaaggaaaaaaacatattcataccttagaaaacactattcaatggaaaccggaggaaaaccacaactacaaccacactctaacaaacctaccaagaccgagaaaaatgaagaaaggcgaagcccaaagcaaccatcgataaagagctcgtcgatcaaagtttatatagtactgttaaatttactttagaaattcaagcttcaaacacatataacaaatcaatcgatggaactgacaccaatcacctcatatcaaatctagcatagggtgagcgatcatcatcagttcatcacaacggcgatcgatccatcgatctcacatcttgttgcattgggggaaaccgatgatgcagaggacgtgaaacccaagaggaaggcggcgagcgcggtggaggagatctccggcatgttcggcatcgccccgggctccatcccgggggaatggttcaaccccggcggcgtcggcagcgccgccgccgccgccggcgggtcgtcggctccgtctccggggccgtcgtccgtcgtcaccaccgacgacgacttcaccctcgagatgcagcagatcatgtcgtcgctgccgctgcttcaacctgaagagcatcataactggaacgcataaagctttggaacagcaagatgagagatgatttggtagtgagagagagagagagactgtaaatcggttctgatgagcagtgagaaaaaatgttggttcttgttttttgttgtttgtactgggccttattgtcggatctgtcacgcgctctgccttttgaattgcaaactgtttttcgttattgctatcaagtaattaaaagggtttctcgtagttgatagtccttgtctaaatcagtgaagagattcaagaaaattcagctgatatattggaaatccactccagcaactgtggagtatgttccttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0679400, RefSeq:Os06g0679400