Os06g0679800

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Revision as of 09:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0679800| Description = Heat shock protein Hsp70 family protein| Version = NM_001064906.2 GI:297606366 GeneID:4341853| Length = 6887 bp| De...")
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Gene Name

Os06g0679800

Description

Heat shock protein Hsp70 family protein

Version

NM_001064906.2 GI:297606366 GeneID:4341853

Length

6887 bp

Definition

Oryza sativa Japonica Group Os06g0679800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29163536..29170422

Sequence Coding Region

29163667..29164857

Expression

GEO Profiles:Os06g0679800

Genome Context

<gbrowseImage1> name=NC_008399:29163536..29170422 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29163536..29170422 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgtggtgggcttcgacgtcggcaacgacaccctggtcgccgcggcggcgcggcagcgcggcatcgacgtgctcctcaacgccgagtccaaccgcgagtcccccgccgccgtcgccttctcccacaacgcccgcctcctcggcccccacgccgccggcgccgcctcgtcgcacgcccccttctccagcatcaagcgcctcctcctcctcgcgggccgccccacgctgctcccccgccgcggcggcgacctctcgcgcctccccttccccgtcgaggcctcctccgcggatggaggcggcggcgtcctcgtccacgtcgaccacatcggccgccgcatcgcgctctccccgacccagctcctcgccatgctgctcgggtacctcaggcagctcgcggaggccgacctcgaggcgcccgtatccgactgcgtcatctccgtcccttgctacttcacgcaggcgcagcgccaggcctacctcgacgccgccgccgtcgcgggcctccgccctctcaggctcatgcacgacctcgccgccaccgccctcggctacggcctctaccgctccgacctcggcggccccggtggtcccacgtacgtcgcgttcgtcgacgtcggtcactgcgatacgcaggtggccgtcgtcgcgttcgatgtctccgggatgaaggtgctgtcgcacagattcgatgcggacctagggggaagggactttgatgaggtgctattcgagcattttgcggaggaattcagggacaagtataagatagatgtcactgggaatgtcaaggcaagcatgaggttgagggcggcatgtgagaaggcgaagaaagtgctaagcgcgaatgcggaagcagtggtcaatatcgagtgcctgatggaggagaaggatgtgagggggatgatccggagggaggagtttgagaaactgtgtgctgggctgctggagagggttgtcgagccatgcaagaaggctatggagggttcaaggatcggatttgacaggctgcattctgtggagctcgttgggtcagggtcaagggtacctgctattgctagaattcttgcagggttcttcagaagggagcctagtcgcacgctcaatgccagtgaatgtgtggctcgggggtgtgcactgcagtgcgcaatgcttagtcccacattccgcgttcgagaatatgaggtatag</cdnaseq>

Protein Sequence

<aaseq>MSVVGFDVGNDTLVAAAARQRGIDVLLNAESNRESPAAVAFSHN ARLLGPHAAGAASSHAPFSSIKRLLLLAGRPTLLPRRGGDLSRLPFPVEASSADGGGG VLVHVDHIGRRIALSPTQLLAMLLGYLRQLAEADLEAPVSDCVISVPCYFTQAQRQAY LDAAAVAGLRPLRLMHDLAATALGYGLYRSDLGGPGGPTYVAFVDVGHCDTQVAVVAF DVSGMKVLSHRFDADLGGRDFDEVLFEHFAEEFRDKYKIDVTGNVKASMRLRAACEKA KKVLSANAEAVVNIECLMEEKDVRGMIRREEFEKLCAGLLERVVEPCKKAMEGSRIGF DRLHSVELVGSGSRVPAIARILAGFFRREPSRTLNASECVARGCALQCAMLSPTFRVR EYEV</aaseq>

Gene Sequence

<dnaseqindica>132..1322#ggcgtgcgcggccccgtaccctccgccgcaccgctctctcccgtcccctcctaatccaatcccaatcccaatccccatcccccgatcgaatccccccggatcgcaattccggcggagtcggaggcggcgcgatgagcgtggtgggcttcgacgtcggcaacgacaccctggtcgccgcggcggcgcggcagcgcggcatcgacgtgctcctcaacgccgagtccaaccgcgagtcccccgccgccgtcgccttctcccacaacgcccgcctcctcggcccccacgccgccggcgccgcctcgtcgcacgcccccttctccagcatcaagcgcctcctcctcctcgcgggccgccccacgctgctcccccgccgcggcggcgacctctcgcgcctccccttccccgtcgaggcctcctccgcggatggaggcggcggcgtcctcgtccacgtcgaccacatcggccgccgcatcgcgctctccccgacccagctcctcgccatgctgctcgggtacctcaggcagctcgcggaggccgacctcgaggcgcccgtatccgactgcgtcatctccgtcccttgctacttcacgcaggcgcagcgccaggcctacctcgacgccgccgccgtcgcgggcctccgccctctcaggctcatgcacgacctcgccgccaccgccctcggctacggcctctaccgctccgacctcggcggccccggtggtcccacgtacgtcgcgttcgtcgacgtcggtcactgcgatacgcaggtggccgtcgtcgcgttcgatgtctccgggatgaaggtgctgtcgcacagattcgatgcggacctagggggaagggactttgatgaggtgctattcgagcattttgcggaggaattcagggacaagtataagatagatgtcactgggaatgtcaaggcaagcatgaggttgagggcggcatgtgagaaggcgaagaaagtgctaagcgcgaatgcggaagcagtggtcaatatcgagtgcctgatggaggagaaggatgtgagggggatgatccggagggaggagtttgagaaactgtgtgctgggctgctggagagggttgtcgagccatgcaagaaggctatggagggttcaaggatcggatttgacaggctgcattctgtggagctcgttgggtcagggtcaagggtacctgctattgctagaattcttgcagggttcttcagaagggagcctagtcgcacgctcaatgccagtgaatgtgtggctcgggggtgtgcactgcagtgcgcaatgcttagtcccacattccgcgttcgagaatatgaggtataggttttttttcaatcttataatctttggcattttgagctccatgcacttgcaatgaaaaaaaaaagttccatacggtatttggattgctttcaatgtagcggaaattgatacatttggtgtatgtcaggtccaagatgcaattccttcttcgataggattttgcacgagtgaaggcccaatttcaacattaccaagtaacgcgctattccagagaggtcatccccttcccagtgtgaaggtcgttactctgcataagaacagcaaatttaaactggatgcattttatgtggatgagaatgaattgcctcctggtacctcaacaaaaattggtgctttccaggtatgctatttactctctttatctgataaaagaatgatcacattatatgcttataaccttttgatctggatatctattgtgctttatttaggtctttgcatctgttatttctaacactgtaacttcaaaagatagtattcattctcacaaagactttggccttttaccattagtacactagcagaaataaaataatagccatggaatgctacagatccagttacattctttttgtgtagtcaatttctatacacatgtttaagataaagtttcaaaaggacaagtgcgcagatcccatggaaaccaatattaagagatggagggagcaatgttttatttcactgtgcctttgtttctatagaaattttgatgggcatttatctcccttcttatgactataagatgtcttgggcacttgtcaattgtcgtcaaaatttcttcttctgtgccttgtgggatatttttgtttgcatcttattatataaggaacataattcctatgatggtgaaacaatcttgtgattgtgagccataatatgactgtatgatggtgatattagactgtagcaagtcttgctcacaagcatgtgttcaagttagtttgcctgtgatccactgtaaaaaaaagtatgagtgctgttattttttgagaaatcaacgagagaataataaacaaaaaataatctaagatatattatgaaccaacattctgagggcacactttgcaactccattttgtaagactttgtagtgtatattcacactaatgaagtattcttgtgtagagcaacaagatacagtggtacttagttttaaatacttcataacagctttccagtcagaacttgttgtatccctggtagcatattcagaactatcatctaagtgggtttgttgtactgaaagatcagtgccgtactcttcaagttctattttcttccttggaagtcaggccactacttctcatgatgatagattaatagttctatgcgttcatccattaatttgggcatatattgttcatggtttggtaactagggatggatagatggataattgatatattgtatcttctgtcttctgaaacctctagtaaccttgcatatcagctggatttgtggcataaaatcttcttgccatgaatcgagtcaagatacacttacagtttgaaatagtggggtgttgatgtgctacataatttcttctaactatttgaagtgatgttattgcagattggccctttccaagcacatactgaaaagtctaaagtcaaagtaagaattcggttaaatctccatggacttgtttcagtggaatcagctgctgtaagtatcaattttcatagtaattggcagctttttttttaatgtaaacttctgacctgtaaactgcctcagctgattgatgatgatcaaagcgatgcacattctgctgactctatggaggtggattccaatggtgaaatggtgaggacttgttgtgcaaactgagcctagattactgccatatacgtgttcctaaaacttatgcattgtgctcttataatcactgtgctgatatggtagtatgtgttggtgtataattcaataaatgctgtatagcaactagcaatagtcttttgattataatttatccctattggttgggtatagctgtgcatctttaactattagaattgtgaattcgcaaacaacttgttaatacagctaattggtagaatatatcttggaattagttatatgttgagaaatcgaaaaggaatatgaatatttcctgctcaaagtacaaactacatacttcaaaacttttaagaagtggtctttcagttatgcccaattaactaggtgtctcaactgttattatgtgaaggggcaacaggttgataagtcaagaagcgaaaggttaatccaattgcctattgttcagtccatttatggtgcaatgagtaatcaggaattgctggaagctcaagagcaagaatcacaacttgcttatcaggataaactcatggagcggacaaaagaaaggaagaacgcattggaatcttatgtgtatgatactcgcaataaggtggctatatgagaatgttaactatatcttccttttgaagtgcaaagttctgttggctgatatattgttttctagctttccgagaggtatcggagctttgcaactgattctgaaagagaagaaatctcactcagtctacaacagactgaagattggctttatgaagaaggtgatgatgagactgaagcagtttacaatagtaaacttgaggagctgaaaagggtaaaaacaatattctcatctctgtctacatactgacttttataatctctttctgggtatttatttccagaactgttttccagttcctgctaatgtaaatatgtaacatctcatgattcttctcgcttcattttatggtttttgactgacatcgattgtataatttttgtactctgtttattctgtgacatactgacataccatggtacactccatcctaatgcacattcttaaaaccatgatgatgtgatcactatttctttttgatagtctcttgctgcactagacttggtttgaatatgctttttgtttgatttatatcatatgggtagctgatgctagattgaaaggagtaattttcttatgtggcttaggctgactccagaaaaaaaaacatggcaactcaatggctgttatacaattttgcatttgtggatagtgaattagcacatggtaaagaataaaaggtattttaattattacatctagaaagatacgagcgttatttggattgaattattttttgagtggcaatcctatttgcagtagtcggtgcctagaactctatgagtgtcttttctattttgcaccaaatcctggtagagcatctatctcggaggtctaatctgtttgttttatctttcacctcaccatcatatcattttcttatgtttgctttatatttaaagcttgtagatcccattgaaaatcgttgtaaagatgaggaggtcagaggtcaagccacaagggatcttttgaagttcattcttgaccacaagacggctgccaaatcattacccacacctgagcaagaggctgtaagttctgtaaccattacccttcttttcttgtgcactctgattaagtacatctgtatgtgattccataaatttcagcagttcagcacatatataatgtgtaaggacgtgactacaacaagtgcaatagcgctttaatcctaagcagtgactcaacatacttaccgaaaatagaaacaccgcgtccctgcccacctacgcacagctttctggaaaaaaaaggacgtatctatacagtgcacatccacttattagcaccatgtggttaacattctccagaatatagcacatcgcactagtagttttaaaacctttgatagtttatatcttttaaaccgtatattatttttaagatttgatcaaaccatcatagtctacttaaaatatatgacaaaacgagtccaatattaaatatattcagattatttaaaatttattcttatctttaactcctttaattttaataccataaaaaagttacttctaacaccttgaaaaattagttctattttttttcagtgttacttacctctaggagtgtagtaacttctaatgctgtgaatagtcacttctattttctaaagagttacttcctatatgaaatacattgtttttatcgaaaaacaataatctctctctatatatggtttatcttgaataaaaaaaacatgtatttacttgtgaatctacactttacctatgaagatatttgctttaacatatatacgtaatcacttctaatgctataaaaagttacttccattgtagagctgagttgcttttaccatttacgtaaactacatttaaatattttaatatattcaatattgtactcattttatcatatattttgagtagagttcaatgaataaaatggatcttaaaaataatacatggtttgaaatatataagtcatcaaaaatttaaaatagactagtactatataagttaggaagacttacattggactctcaggctaaaagcgtggatataaaattttaaaagtatgcatgcatacgcgcgtacgtgatgactttaattggacggcttcggcaggcgtcgcgccgtaagactaatccgtgcgcacgcatagattagattttacgaatgcgtaactatgtacgataaaaaaaatgaagataagaccttttggatcatatgatgaggtgtagaactatagattttagagcggaaacaattgatggtcttaaaatgaaactattctaataaacacatactcaaagtattaactgggaaccaactttacttgtttgtatttgtcttgtgtaaagcatcgcgatacaatgctgtggctgacttgtgtttctgactatcggtttctgtccaggttgatagtgagtgcactaaagccgaacaatggttaagggagaggtcacaactccaggagtccctgcctaagaatgttgatcctgccctttggtcccatgaaatcaagaaaaaagaacacgagttggatatgtaattagctctttcctccccaagtccatttttcaactgacttgtgcaaaatcagttactgtttacatcccagattatcttagtacatttgcttgactccacttgcaggttctatagaaacatagtaaggtacaagggttctccagcaagagcggattctagcggtggttcagatcacatgcatacaacagatagagactagacattcctcggatttcttagctgaacagcgatgtcaagcctgacattttgtagcaatatacagataaacgagtttctactaacagtcttatacgatccggctctgtaccacactcagcccaccattgggtgcctgcatctcgataatccaagctcgaggtgtggttttcacttgaaaacctactaatcatgattgtgtattcttttcctgtaatcgactcaagggctcaaggctgtttgcgtttttccttgcgaacaaggaatggaagaaggttgtacgccattgattacttacttccaatgaccacaggagttgtagctttgggtttcactttcattttgtgctgattccataaagctgtcctggaaagtctatatgatgagtttgtatggtgtacattgattgatcaaagatgttcaagtttttctttccat</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0679800, RefSeq:Os06g0679800