Os06g0680900

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Revision as of 09:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0680900| Description = Exostosin-like family protein| Version = NM_001064909.1 GI:115469549 GeneID:4341856| Length = 8299 bp| Definition =...")
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Gene Name

Os06g0680900

Description

Exostosin-like family protein

Version

NM_001064909.1 GI:115469549 GeneID:4341856

Length

8299 bp

Definition

Oryza sativa Japonica Group Os06g0680900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29240633..29248931

Sequence Coding Region

29240871..29241551,29242337..29242703,29244154..29244299,29244527..29244766

Expression

GEO Profiles:Os06g0680900

Genome Context

<gbrowseImage1> name=NC_008399:29240633..29248931 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29240633..29248931 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccaagaacagctgcgcctgccacggcgtcgtcgtcaccctggcctcgtgcctcctcctcgtcgccgccgccgtctccgtctctgtcctcgccgcgcacgtcgccgtcggccgcgtctggtctcctgccggcgccgccgccgccgccggccatcaccattcactctcaccggcttgggtgccatcaccgtcatcacgccatgctcatcatgccagggaactcgtgaaccgccgagttcaggtcgggaggatggaggccgggctggtccaggcgcgggtgtccatccggcgagccagccgcacgcgcagctgcacgccggacgacggcggcgggttcatccccaggggcgccgtgtaccgcgacgcctacgccttccaccagagttacattgagatggagaagaggttcaaggtgtggacgtacagagagggcgagccgccggtcgtgcaaaagggcggcgccgccttcgccggcaacgacggcatagagggccacctcatcgccgagctggacagcagcggcggcggcggccggcaccgggcacgccaccccggcgaggcgcacgccttcttcctccccatcagcgtcgccagcatcgccggctacgtctaccgccgcgacatgatcgacttctgggacccccagctccggctcgtcgccggctacgtcgacggcctcgccgccatgtaccccttctggaatcgcagccgcggcgccgatcacttcctcgtctcctgccaccaatgggccccgatcctgtccgctgccaaggcggagctacgcggcaacgccatccgcgtcatgtgcgacgccgacatgtcggacggcttcgaccccgccacggacgtcgcgctgccgccggtggtcgccagcgcccgcgcgacgccgccgcagggccgcgtggcttcggaacgcacggtgctcgcgttcttcgccgccggcggtggcggcggcggcgccgtgagggaggcgctgctggcgcggtgggaggggcgggatgaccgggtggtggtgtacggtcgcctcccggcgggtgtggaccacggcgagctcatgcgcagggcgcggttctgcctgtgcccgtgcggcggcggcgagggcgcggccgcggcgagccgccgcgtcgtggaggcgatcaccgccgggtgcgtgccggtgctcgtcgacgacggcggctactcgccgccgttcagcgacgtgctggactgggcacggttctccgtcgccgtccccgcggaacgcgtcggcgagatcaaggacatcctcggcggcgtctcggaccgccgctacggcgtgctccgccgccgcgtgctgcgcgtccggcgccacttccggctgaaccggccgccggccaagcggttcgacgtggtcaacatggtcatccactccatctggctccgccgcctcaacctcagcctcccctactga</cdnaseq>

Protein Sequence

<aaseq>MASKNSCACHGVVVTLASCLLLVAAAVSVSVLAAHVAVGRVWSP AGAAAAAGHHHSLSPAWVPSPSSRHAHHARELVNRRVQVGRMEAGLVQARVSIRRASR TRSCTPDDGGGFIPRGAVYRDAYAFHQSYIEMEKRFKVWTYREGEPPVVQKGGAAFAG NDGIEGHLIAELDSSGGGGRHRARHPGEAHAFFLPISVASIAGYVYRRDMIDFWDPQL RLVAGYVDGLAAMYPFWNRSRGADHFLVSCHQWAPILSAAKAELRGNAIRVMCDADMS DGFDPATDVALPPVVASARATPPQGRVASERTVLAFFAAGGGGGGAVREALLARWEGR DDRVVVYGRLPAGVDHGELMRRARFCLCPCGGGEGAAAASRRVVEAITAGCVPVLVDD GGYSPPFSDVLDWARFSVAVPAERVGEIKDILGGVSDRRYGVLRRRVLRVRRHFRLNR PPAKRFDVVNMVIHSIWLRRLNLSLPY</aaseq>

Gene Sequence

<dnaseqindica>7381..8061#6229..6595#4633..4778#4166..4405#agtggagggcaaccagccgccgccgccggccgccgtctcgtcttgggatcgcacgcggcgcggaagaggtagggtggttgctaggtgagtcagcctcctccgatctctccctcggacgcgtcgcgatgatctggggtttcatgggaatgcctcttgctttgcgaatttgagccatttcgatcttctttgcagtgaggagggaggtggttggaggaggatgagcgaggggaggccggtgccgaggagggagagcccatggggcttgccggagggggacaagcgggagcccaaggcgcaccgctgcaacgaccgcgccgaggacgtcgtccaggttccaccccctctcaaccctaatccaaccacagctcacgacctgattgatctcttattatcttcctaccgatgaatgagtggtgatgaatgtgtaatggaaattgcggagctcagagctacccggatgatagttttgtggagaacctcttgtcgctatgcctgtttgctagtactaaatttggatcttgaaggcgcttgatagtgaaattggctgtaattgcatcgttaaacatagttgttttggcattactagcctttcttacttacaattatttcagtgtttacctaactgaatgtcttctcttcgtgttacataacaagattgcatgatgttctctgcccaccagccaccatgatcctgcatgtgcattgcgccattgctgcgattgttgttgctttcaggctgcaggtggtatttccatgtttgatcccaaaaccatgtttaggaacggcctagatggcaatcagattcttatgcttacccaggatgaaataagcctcagtaattaacccaaaaaccaatggcggagcttcatcgaaatagtgagggggccaaatgtctgaacattagatcctcagtattgatcaagtacagaaataaactcaaattggttcatttgcacttattggccatattactggtctatactcctaggtgaataagaaaagtgggaactaataggcaaattataacaacatacactactaggtgaataagaaaagtgggaactaataggcaaattataacaacatacactgctaggtgaataagaaacctcggggaggccatgaacccatttaatcacaagtagaaatggacgaattttcagtatggaattgcccctaatttcaactagcatgctggttccactcacactgaacctgccagggtccaaaattttcatcctgtctgggattttcagtaaagagttttcatcagttatcagcgtctgctatgtaatgaatgtttcccaagaatgctgaagaattttgctctgtgcctcaatgtgttgattatattatagcaaatgatgatattgttaattctgaaattcttggccatctttatgttgaactcatcctgtctaggatattcagtaaagagttttcatcagttatcagcgtctgctatgtaatgaatgtttcccaagaatgctgaagaattttgctctgtgcctcaatgtgttgattatattatagcaaatgatgatattgttaattctgaaattcttggccatctttatgttgaactcatcctgtctaggatattcagtaaagagttttcattggttatctgcgtctgctacgtaatgaatgtttcccaagaatgctgaagaattttgctctatgcctcattatgttgatcatattagggaaaatgatgcaattgttaattctgaaaattttgtccatttctatgttgaactggttttctaatttctgttgcaggcttgctttgaggggaatcctttcaagacagttccaggtccattcaagctcttttggcaatgcatgcgttcgaaacctgggtatgtacaacttcttacaatttgtatgtttcatgcttttgttcacacatatattcccagtaatatgaggcaacatacgtttcaataggtctagcacattaagaactaatatgattgataaaggacattggaatcatctgattgaggggttttaaggagtggtcacaggatgctcatgataaggtggaccattatattgtgcctattgtttgatatgttcttctctttatgctccttcttgccggtggctcttccaccataggtccttcagcagcctaaagaaatatgtgccatgtgaatatacctagtggctgcagaaaatgctcatgatgactaatctttgcagtgtaaaaggctctagtgttgtgattcctttcaccacatggattagcatgagctttgttttctgaccaactgaacttgtaatctctgagagttgtgtgaattagattgtaaggcaactttgtatttgagaagttatatagggctattctcaattaaatacaaatccaataaaattttatgtatgcttcttggcctgttttgccatgtagttattcgttgcttggttacatgtgtcatgtatcaccttctaggatggtggtttggttgctttcttcacttccaatggcgggtagggtttcttttcaaatgaaatttgttgttgtcaaacctgggaaagggaaaggaaaatatggtctatctcaatttggctggttcagtttggtcaagttaggagcactgacactgtctggctgggagcaactgcttcaaacaggctaatgctagaaccactgaactgaccaatagccactcaagtgagaaaaagaagtattgttgctagttgctaccataccttggggtagaaatcgaggcaaccctttcgatagacattctttccccaagaagcttctgtacttcagaaaactgttgtagacaaaacgctatttacttgagtccactaaaatgtgaagctgtgagaaatgttgttatgacaaatgtacttgtgtgtgactagtagtagttagattgtaatgagcatcgtaaccctgaatatttctcttacgtttgtatctgaagttttcatgtaacaacctgttatttacagggaggagccaacggagccgtatacttacctgcagctggatcctcccaagagagcggaagtcaagctagagtaaacagcacctaagtcgtccacaagagtgtttagtttatttcatagtggtttgccttcaaaacaacgcctttatctcctagggaccatgttgtgcacaatgccttatgtttgcatattcaagaataaaaatttgacaatcctgatccagagtaatgccttatgtttgcatgtttgaaattgctgttgctgatgtaagaattccctcccgatagaatgatacctgcactttcaagatgagttactcagggccaaaagagtaaaaggccctgctcaacttactatttttttgaccccacgaaaaagagtgaaatggcttctgaaacaggttcacttattatggtgtctgagctctgtactgtacgtataagagtagcaatgtagcattatgaatgcgctactgtgtgtagatcagttgtgggattgtttactgtatttgtcagtgcatgagtcttaatgaatgagacggtactttggtacaggtccataatgataatctgcttcactacacaaaatctgacactccctaatcagcctctgattatttccttttgttctttcttgcttgcatgagtatttacacaaggctgtactgtacatgttggttgctctacagatattcttcaagagccagcacttggttgatctacagatattgttactgctactgctactactgctgcacatggtgatgggccagggaggcatcaaagctagagaccgtgccgtccacggtgagtcagtcttctctgttattattctatcgcctcaatgcacaataacaccagtgccttcatatgcacccaacctctgcattgcaaaattttgcaactgttgcaagtgactgatccaactcctaggttggttgcagatccaaagctgcaattatctgacacggatgcagatatgatcctgaactcgaaaaccgtttgtgttgcagatcccaatcacgcatcgatcgacctgggactgagctactgagctaagcttaccatggtgatcttgattcttgtaacgtagagactacaccatcttctgctacatatagcccggaatgcaccaatgcatgagtggatcagctcacctgaaagcctgaaactgaactgacctgatcacctgaccatcaatggcgtccaagaacagctgcgcctgccacggcgtcgtcgtcaccctggcctcgtgcctcctcctcgtcgccgccgccgtctccgtctctgtcctcgccgcgcacgtcgccgtcggccgcgtctggtctcctgccggcgccgccgccgccgccggccatcaccattcactctcaccggcttgggtgccatcaccgtcatcacgccatgctcatcatgccagggaactcgtgaaccgccgagtacgtacgccatgctcatgccacactcagactcaacggtgtttgtgcagtgatgatgtgatccgtaatgggcaatggatgcagaattgcagcagtgcagtttcagatgcaggaagtgtcaatgcaaaaaaaaaaaagtcagcgatgttgctgtgacatgtttttgataaatatttttgacatgtatatttgacaaatatttttgtttgtgcatgcgtgtgtgtcaggttcaggtcgggaggatggaggccgggctggtccaggcgcgggtgtccatccggcgagccagccgcacgcgcagctgcacgccggacgacggcggcgggttcatccccaggggcgccgtgtaccgcgacgcctacgccttccaccagtaagtaaattcaccactccgtattttcgttcccaaaaacacacaaatacacataagggctcaagagacggaggcaaaacgataaatcggtaacctcactaaattcttattgaaaaacatcacattcacacagttgtctcctttgccaatccgtaacctcactaaattcttattgaaaatgtcatatttatacggttgtctcctttgccactccacatctggccacgcatacccaattactcactccgttttatgttttatattattagacgctttaattttttaattaatttttttaaagtttgataaagtttataggaaaatataataacatttttaatgtataacaaacatgttatcaaaatatattaatgttacatctaattaaactaatttgatgttgtagatgtaggcaattttttttatgaatttaattaaacctaaaaaaatttgaaaaaaaatcaaaaggaattataatatattataaaacaatggggctagtaaccaagagctatatatgtgtaattaagttggccgcggctagctgctgccggctaagctaggataagcattcgtgattcgtcgacacccgatcgagggcattaacacgccttcctcgccgatttggacggcaaacggcctgaccaaatgcagccatcactaaactctacactacacggatatatgaattcttcgtacgggctcgtgcgatgactcgatgatcgatcggttgttggttgatgggtgcatcgctttggctctgctctttgtttggtgagacatgcatgctttgtgacggcaacgcctagctaatcttacaggcagagaccacactgctccattattagaggtcatcacaattcatcatcatcatcagccggcttctagatgattttgtaattagagtactcttaattatttgtgctcaatttatagatataacgtgtggacctacctaattataacctacctagtacacgtagtacttcactactttgacaaaatgcacctgtagtatactagaggtactatatacggagtatatgtaagttgtcatgtaatggtagacgatttttataaattgcatgcaattgaatttcactctacttgcgtacccagtacagtaaaattttgctactagagcattgtactgtactacatttatttttaataaacgatgccgctgattttttaatacacgtttgatcatttgttttatttaaaaaatgtaattatcatttattttattatgagttgtttgatcataaaaaatttgatattcatcaaagtttttaaataaaatgaattatcaacatcaaaggacgccgtacggaggaagcaatactatcgtaaaacaaggggaggttaattttaattgtggtcatgattaattaacagccaataattaactgttactgcatcatttgatcattgattatactatcatcaggagttacattgagatggagaagaggttcaaggtgtggacgtacagagagggcgagccgccggtcgtgcaaaagggcggcgccgccttcgccggcaacgacggcatagagggccacctcatcgccgagctggacagcagcggcggcggcggccggcaccgggcacgccaccccggcgaggcgcacgccttcttcctccccatcagcgtcgccagcatcgccggctacgtctaccgccgcgacatgatcgacttctgggacccccagctccggctcgtcgccggctacgtcgacggcctcgccgccatgtaccccttctggaatcgcagccgcggcgccgatcacttcctcgtctcctgccaccaatgggtaaattacactccacactctcctgcgctacttttcgcgggaattgagaaatactccctccgttcaaaaatataaatatttttagcatggtgtcaaagtcaacatttttaattttgactattagtagtaaaaaaaataaaaagcttaattatgtaaaattgatattactagatttatcattaaaaaaactatcataaaatacaaaatttttaaaacatattacttttatagatattattagtcaaagtaatatctcgaaaactgtatcgaagtttaaaaatacttatattttaggagagatagtatatgtaatttcagtaaaggcgttgaaattaattaattctacgaaattatggataaattaatgaatgaattaattaattccgcgtctcaaatggggtcacttgtatcgtacccgtcaagctctgcattcaaatacaaacagtctagcactctagcagtctagcttgttagttcgttaaccaggcagtttggtgatcagttgctttcacgagtttaaatgcataataattaataaaccggcaacattttagtactagctgtgatgccacaataggtaacgaaacgtatcatgtttagctatgcagagagaccatagttatagggagacatgatgacacatgaacagcatcatgtatccatttgatcgtgacacgaatcaaatatatgctgcttaattgattattgcatctttttttttaagggaacaaaagaaattcaaacttaattgactcgatcgctgcgacatgtgtgcgtgcgtgtaggccccgatcctgtccgctgccaaggcggagctacgcggcaacgccatccgcgtcatgtgcgacgccgacatgtcggacggcttcgaccccgccacggacgtcgcgctgccgccggtggtcgccagcgcccgcgcgacgccgccgcagggccgcgtggcttcggaacgcacggtgctcgcgttcttcgccgccggcggtggcggcggcggcgccgtgagggaggcgctgctggcgcggtgggaggggcgggatgaccgggtggtggtgtacggtcgcctcccggcgggtgtggaccacggcgagctcatgcgcagggcgcggttctgcctgtgcccgtgcggcggcggcgagggcgcggccgcggcgagccgccgcgtcgtggaggcgatcaccgccgggtgcgtgccggtgctcgtcgacgacggcggctactcgccgccgttcagcgacgtgctggactgggcacggttctccgtcgccgtccccgcggaacgcgtcggcgagatcaaggacatcctcggcggcgtctcggaccgccgctacggcgtgctccgccgccgcgtgctgcgcgtccggcgccacttccggctgaaccggccgccggccaagcggttcgacgtggtcaacatggtcatccactccatctggctccgccgcctcaacctcagcctcccctactgaattacagaatgaacaacaaaaaagaaagttaattaggtccctgcagtttggaacgcgagaaaatttcacgttcctacaaaatttgaactgttctatgttcgaaacgagaccggccagtgtgatggatctgaccaagctagctaagctaaccaaagtgtgcagtagaacactgtacactgcatttctgcatttatagacaataggttgtgttcgaatgagttattcctaatttctcgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0680900, RefSeq:Os06g0680900