Os01g0928000
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os01g0928000 |
|---|---|
| Description |
Similar to Transcription factor ICE1 (Inducer of CBF expression 1) (Basic helix- loop-helix protein 116) (bHLH116) (AtbHLH116) |
| Version |
NM_001051807.1 GI:115441984 GeneID:4326959 |
| Length |
2897 bp |
| Definition |
Oryza sativa Japonica Group Os01g0928000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:42509063..42511959 |
| Sequence Coding Region |
42509361..42509444,42509571..42509741,42510073..42510300,42511286..42511948 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:42509063..42511959 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:42509063..42511959 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggacgaggcggaggcggcggcggcggcggcgaagatggacgagctggcgggaggaggaggaggaggcggcggcgactggtcgtacctcgcggcggacgcgctggcggcggcgtcgttcacggcgttcccgttccaccaccaccaccaccaccaccaccgcgacgtgctctcggcgtcgaccccgtcgtcgctgctcctcaacatggacgcggccaccgccgcggccatgttcgacttccaggcggccttcccgtcgtcctccgtcccgccgccgccgcccacgacgacggcggcgctcccgccgttccacgacttcgcctcctccaacccgttcgacgacgcgccgcccccgttcctcgcgccgccggggcagaagctcgggttcctggggccccccggcggcgcgttcggcggcgggatggggtgggacgacgacgacgagatcgagcagagcgtggacgcctcgtccatgggtgtctcggcctcgctggagaatgccgcgcccgtggcggccggaggaggcggcggcggtggcggcggcggtgggaggggcaagaagaaggggatgccggccaagaacctcatggcggagcggcggcgcaggaagaagctcaacgaccgcctctacatgctgcgctccgtggtgcccaagatcagcaagatggacagagcttctatccttggtgatgcaattgagtacttgaaggagctcctgcagaggattaacgatcttcacaatgaacttgagtctgctcctagctcttcgcttactggaccatcatcggctagcttccacccatcaacacccacattgcagacgtttcctggccgcgttaaggaggaactttgcccaacctcatttccaagccctagtggtcaacaagccacggtcgaagttaggatgagggaaggtcatgcagtcaatatccacatgttctgcgcacgcaggcccggcattctgatgtccacattgagggctctcgacagccttggcctcgggatcgagcaggcggtcatcagctgtttcaatgggtttgcaatggatgttttccgcgccgagcaatgcagggatggtcctggactcgggcctgaagaaattaagaccgtgctcctgcactctgctggccttcagaacgcaatgtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MDEAEAAAAAAKMDELAGGGGGGGGDWSYLAADALAAASFTAFP FHHHHHHHHRDVLSASTPSSLLLNMDAATAAAMFDFQAAFPSSSVPPPPPTTTAALPP FHDFASSNPFDDAPPPFLAPPGQKLGFLGPPGGAFGGGMGWDDDDEIEQSVDASSMGV SASLENAAPVAAGGGGGGGGGGGRGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPK ISKMDRASILGDAIEYLKELLQRINDLHNELESAPSSSLTGPSSASFHPSTPTLQTFP GRVKEELCPTSFPSPSGQQATVEVRMREGHAVNIHMFCARRPGILMSTLRALDSLGLG IEQAVISCFNGFAMDVFRAEQCRDGPGLGPEEIKTVLLHSAGLQNAM</aaseq> |
| Gene Sequence |
<dnaseqindica>2516..2599#2219..2389#1660..1887#12..674#gcgaggttgccatggacgaggcggaggcggcggcggcggcggcgaagatggacgagctggcgggaggaggaggaggaggcggcggcgactggtcgtacctcgcggcggacgcgctggcggcggcgtcgttcacggcgttcccgttccaccaccaccaccaccaccaccaccgcgacgtgctctcggcgtcgaccccgtcgtcgctgctcctcaacatggacgcggccaccgccgcggccatgttcgacttccaggcggccttcccgtcgtcctccgtcccgccgccgccgcccacgacgacggcggcgctcccgccgttccacgacttcgcctcctccaacccgttcgacgacgcgccgcccccgttcctcgcgccgccggggcagaagctcgggttcctggggccccccggcggcgcgttcggcggcgggatggggtgggacgacgacgacgagatcgagcagagcgtggacgcctcgtccatgggtgtctcggcctcgctggagaatgccgcgcccgtggcggccggaggaggcggcggcggtggcggcggcggtgggaggggcaagaagaaggggatgccggccaagaacctcatggcggagcggcggcgcaggaagaagctcaacgaccgcctctacatgctgcgctccgtggtgcccaagatcagcaaggtgattaatgacctcatttctattttttcactgttcattgctaattatttaattaatcagcagctccagtttctactagactgtatcttattaattaaattaatcagcattttctatttctacttttctaatttcagttttggcaacatgtttcagttcttgagtgatgtatactggtgtaggtcctgtaggagtgtgtttgtcatgatatttgtcactgaaattggttccaattttggtgctgaattcttgaattggctccacttcagatccaaaaaaacatccttttttcattagatctatgtcataccttgtcatgttcacatggtaacatgaggagttcctattcagcttgctggatggttgttttacagttcagttatggtaatttcagttctgaaattatacttcaatgtcttttttctaggactttataatttgtcgtagcttgagattacacatattatggggaactttgattctgatccatggccagatttagtgatgcatgattaacacagtgccatgcacaagatgtagttgaaagtgaccagataccagataactcacaaattcttttcccccttttctttctgttttttttttgtagttcttcgtgttggatgttttgtctttaacttttgttggtttccttgaaaaaagtcgttcactttggaagtttcggcatgcgaagtgcatattcagttctctgcagtcctttcgtgtgaagaacttactactttccttcacagcgatcaagatggttttgaacaataaagaaagacctgatgtactacagttcttgggatattatgacaagttgcagtctaacaattcagcgccatgtacgatgtgccgttttttagtgtagcagtacaaaacaatttatgtcaaagtgttcttaatgccaactatgtctgactcgtttcatgttaatatctatagtttatcatctcattaccagttttcttctcctttgtgacagatggacagagcttctatccttggtgatgcaattgagtacttgaaggagctcctgcagaggattaacgatcttcacaatgaacttgagtctgctcctagctcttcgcttactggaccatcatcggctagcttccacccatcaacacccacattgcagacgtttcctggccgcgttaaggaggaactttgcccaacctcatttccaagccctagtggtcaacaagccacggttagtcaaattttgaccatgattgttaagcctttgcactagtggcaattatgcaattggcccttgatacttatatgcttaagcatgctttagtgctcaagattaacgcacttgggagctactccttttgtttcaaaatataagcaattcttgctatgtatctggacaagaaatgcttatattttggaacggagggaatattacttatttcgcggtacttgcactttgcagtctgcacaagtacttgatcattcaggccttgttgattcatgtagcggtaacaatatggtgtatagcaaccaagtgacattcacctctcttgtttgttcaggtcgaagttaggatgagggaaggtcatgcagtcaatatccacatgttctgcgcacgcaggcccggcattctgatgtccacattgagggctctcgacagccttggcctcgggatcgagcaggcggtcatcagctgtttcaatgggtttgcaatggatgttttccgcgccgaggtttgcattctccacatcataatatttttctcctccagctgagggttttttttcagttgtgttcgatctgatcctaccgttgttgttcactctcttaatgcttgctctgtacttctgttttgccagcaatgcagggatggtcctggactcgggcctgaagaaattaagaccgtgctcctgcactctgctggccttcagaacgcaatgtaatcagcaagtcagaaagcagtcaagaccaatgcactgggatttgatcagtgatcatttgcatcagatgatctggtttatcaaaaagttatagtaagtatggcatatatgctgtttatctaggagaactgatgagatgaggctcgccatctagagacatgtgtgatgatgatgatgtaactgggtttctttctttctgttgtcgtttttttttctgaatgttgtttgtgatgtaataggatctttgtccattgaaaccatgtccattatcatgatgagaatatgaacccagtgtcttttg</dnaseqindica> |
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