Os06g0681200

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Revision as of 09:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0681200| Description = Cupredoxin domain containing protein| Version = NM_001064911.1 GI:115469553 GeneID:4341858| Length = 1200 bp| Defin...")
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Gene Name

Os06g0681200

Description

Cupredoxin domain containing protein

Version

NM_001064911.1 GI:115469553 GeneID:4341858

Length

1200 bp

Definition

Oryza sativa Japonica Group Os06g0681200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29265377..29266576

Sequence Coding Region

29265551..29266209,29266319..29266499

Expression

GEO Profiles:Os06g0681200

Genome Context

<gbrowseImage1> name=NC_008399:29265377..29266576 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29265377..29266576 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggagcagtggcaactgtcagtgtggggctcgcgtggttgggtctcatggccgcagcggcgagcgcgacgcagttcagagtcggaggaggcagaggctggagcgtccccgacgccaacgccgagccgtacaactcgtgggccggcaggatgaggttccagatcggcgaccagctgctgttcgtgtacccgaaggagatggacgcggtggtggtggtggatcagggggcgtacgacgcgtgcaacacgtcgtcgtcggtggccggcggcggcggcggaaggtacgacgacggcaacacggtgttcacgttcgacaggtcggggcccttcttcttcatcagcggcaacgaggccaactgccgcgccggcgagaagctcgtcgtcgtcgtcatggcagaccgcggcggccgccacgcgcctccgccgtcgccgccggctgtgcctcctcccgtcgcgccggtgccgatgccgagcccggcgtcgtcgccaccgtcgcctgcgccagccgccgccaccccgagcttggcgccgtctccggtagctacgacgccgagcccatcgccgtcggtttcacctatggcgccggcgcctgctccgacgacgtcaacaccgagctcgccaccggcgccagcggccatggcaccgtcgccgtcaactacccctggaggcgtggcccagccgccgccgccgccggggaccgatggggcgaacgcgacgacgccggcggcgcccgcagccaacgaccggagtggcgccgccgccgctgctccggtggtggccggcgtcgtcgtcacgtcgctgggagcatacatcggctacgccatgctagctatctga</cdnaseq>

Protein Sequence

<aaseq>MAGAVATVSVGLAWLGLMAAAASATQFRVGGGRGWSVPDANAEP YNSWAGRMRFQIGDQLLFVYPKEMDAVVVVDQGAYDACNTSSSVAGGGGGRYDDGNTV FTFDRSGPFFFISGNEANCRAGEKLVVVVMADRGGRHAPPPSPPAVPPPVAPVPMPSP ASSPPSPAPAAATPSLAPSPVATTPSPSPSVSPMAPAPAPTTSTPSSPPAPAAMAPSP STTPGGVAQPPPPPGTDGANATTPAAPAANDRSGAAAAAPVVAGVVVTSLGAYIGYAM LAI</aaseq>

Gene Sequence

<dnaseqindica>368..1026#78..258#gatcagatcaggcacagcactgcagtgaaatcgatcactagtcgtggtggtatcaactatcaagtgtgcaagaaaaaatggcgggagcagtggcaactgtcagtgtggggctcgcgtggttgggtctcatggccgcagcggcgagcgcgacgcagttcagagtcggaggaggcagaggctggagcgtccccgacgccaacgccgagccgtacaactcgtgggccggcaggatgaggttccagatcggcgaccagctgcgtaagtcgccgcgccgccgccgagatgatcgccggcgaggatttcgccggccgtgcaagcgtggtgatgatctcacggtttctttcttttttttttttggttggtgcagtgttcgtgtacccgaaggagatggacgcggtggtggtggtggatcagggggcgtacgacgcgtgcaacacgtcgtcgtcggtggccggcggcggcggcggaaggtacgacgacggcaacacggtgttcacgttcgacaggtcggggcccttcttcttcatcagcggcaacgaggccaactgccgcgccggcgagaagctcgtcgtcgtcgtcatggcagaccgcggcggccgccacgcgcctccgccgtcgccgccggctgtgcctcctcccgtcgcgccggtgccgatgccgagcccggcgtcgtcgccaccgtcgcctgcgccagccgccgccaccccgagcttggcgccgtctccggtagctacgacgccgagcccatcgccgtcggtttcacctatggcgccggcgcctgctccgacgacgtcaacaccgagctcgccaccggcgccagcggccatggcaccgtcgccgtcaactacccctggaggcgtggcccagccgccgccgccgccggggaccgatggggcgaacgcgacgacgccggcggcgcccgcagccaacgaccggagtggcgccgccgccgctgctccggtggtggccggcgtcgtcgtcacgtcgctgggagcatacatcggctacgccatgctagctatctgaagctttctgcttctgcagtgacgtgttcttttatttgtgcagtgtaaagttaaatgaaatcgagtggtatattgttacagataccgtagagactagagaggattatctctggatttgtttttgcattggtggaataatgatagtgaaataaaaatgtggttgagtacttgagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0681200, RefSeq:Os06g0681200