Os06g0681300

From RiceWiki
Revision as of 09:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0681300| Description = PAK-box/P21-Rho-binding domain containing protein| Version = NM_001064912.1 GI:115469555 GeneID:4341859| Length = 55...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0681300

Description

PAK-box/P21-Rho-binding domain containing protein

Version

NM_001064912.1 GI:115469555 GeneID:4341859

Length

5571 bp

Definition

Oryza sativa Japonica Group Os06g0681300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29267433..29273003

Sequence Coding Region

29267637..29267869,29268724..29268811,29268922..29269019,29269164..29269221

Expression

GEO Profiles:Os06g0681300

Genome Context

<gbrowseImage1> name=NC_008399:29267433..29273003 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29267433..29273003 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagataaagatgaaggggatattcaaaggtttgaagataatctctcaaatattcgcactgcagaagcaacaagagatggaaatcgggtgccctacagacgtcaggcatgtgtctcacataggcgtgggcactagtgattcatgcccaagctggatgagtgaattcagaggattggaagagttgtcagcaggctccatgggctcctttgcacagtcaaggaagacatcctgggcatctcaagattttgacaaaccaccaagagccacgctcccaacagaagtctgcacagacaaatccggccaggaggccgcctcctgctgccatgacatcccgagaggccccaagaacccgaggaggaagaaggcagcaagagcatcatccgcgagctccttcttgtcgaggtcaaggtcctcctcgtttgtgacagcgtgcggtgatttcagcgagttgcgtggcggcctccgagtcgcctag</cdnaseq>

Protein Sequence

<aaseq>MEIKMKGIFKGLKIISQIFALQKQQEMEIGCPTDVRHVSHIGVG TSDSCPSWMSEFRGLEELSAGSMGSFAQSRKTSWASQDFDKPPRATLPTEVCTDKSGQ EAASCCHDIPRGPKNPRRKKAARASSASSFLSRSRSSSFVTACGDFSELRGGLRVA</aaseq>

Gene Sequence

<dnaseqindica>5135..5367#4193..4280#3985..4082#3783..3840#ctcctatacctcccctcggcggcgaggcggcggagctccggcgagcctggagcacgtcggggtttcccctcccgcggcctcgccgtatcggatcgccggcgtatggcctacgtctacctaggtattccttccatgcatggcctccgtgctccggctagccgtcccgcccccacggtcgccgccgtgtccccgcgtgctgccggccacctccggggcgcggcggtgcggcgggctcaagctgtaatcagccgaagaggcctcgatatcccttatcccaccacctgcagatagtgatacagtgctccaagtgtgcgctaattctctgaagtctgaacatgcccttggcaaccgatttaacccagtgtcagcgatactctattagttggtaggagtactactaactatgtcatattagtcacaattcaccaattctattgtcttgaattgcagttttttttggttaatttacaatttatttcccctcttcagagttcagatactatgcgaggaattgagagacagccgagcttcaggtacattctgaatcctccaagcttaccacacttcggttttcttaccaatattcagttatacggtatcagaaagacagcgaagagaagttggtgaagagtatcatattctaatgcgagattactcatttactctgttgcttcagccttcattatagtgctcacctaagcagcatcttaatataccaaccactacgagtacacttgacaagttgtcaatcacagtgtggtgattaatgacaagtattttaactttctagtttctacatcagtaaagtggttgttactatgtatgtagatagctagatgtggtgtgactgtcatggaccatatctgcaagtatttggtccaggaatccatcataggtctaagtatgttgcccacatcctaaattgcaaacaatgccagtggttgggtatagtaggtgcaaggcatgatcgttcagattagatctcgtcttcaggaaaaaaaaagaaaacaaaagatgagatgtttgttttgcttttggatgccatcatcttcaacttggtagctatgtttgtttgtttgtagcctgcaagaaactgcatctttcaattgtttgcataaagttccacaaaaagagcatagctgttgactagcctacaagttaatatcctgtattaacaatgtgtatctttcagcacaaataaaaatggagcatcttccatatcccaacgaccctgatgtagcctgcaagagactgcatatctcttctgaaactttgaaaatataaaaatatattgcagaataagagctttgctgtgatgactaatcttctctagttggtggtcccatgtggtcagaggtgtctctaaggaagctaagaaagagctgaactctgtgattatcttagtggcctgggaaatttggaaacaccggaatgactgcatcttcaacaatgccacacctagtactgctgccgtattggatgctttggcaagggagagtttattattgtgtactgctggggcaagagctcttcatgaactcttggcccggtcgctctccacctaggagcttagctcctgcgggagttgttgcgcatcgcctcggcgatgtttttgtgtttttctcttcttttttcagagtgttcctttgtgaagcactctgctgtacataccttttcttctccttaatgaaatgaaacgcatggctcttgcgtttttgagaaaaaaaagtatctttcatcaatacaatatgttatatactgactattccatattcatgataaaacggaccattttgttttatgataacaggtgtcccttttggtcgatttgaaattatattaagggacgtagaccaaatcactatgcaaatgaggaacaatgatgttctgaaatctgttttggatatgcaacttctatatttgcaaggtacctgcagcttatgaagcctgaaatcctggcaaggtactaatgaagacaagcagttccatgaagtccttatataacaacagtgaagttctatattgttttatgttctattttcttagttagtatcttgtttagagaaaaggctttacaccctgcttttttagtaagcaacaagagtacaggcatggtgtcactggggacgattccagcttaactcttagtgtttgcaggtttcctatctgttacgcctttaatatctcaaagagtacagatttaataggcaaagcccagagaagtactagcacccaaaaaatttgttgctgatgttgaactgaaagtaagaaccagactaggtaagcaaaacctatgatccacagaaaaaagaattaagtctgctcacaactacacttaggtgtcaaacataggttgctacgggaccactgaatttaatttaagttgataaaaagataaagtatgatagcagcatggaaatatttttagttaagaaaaatgcttatatggttttcctatatctaagtgtacgcttcagataatatctttggtccaaatttaatgtggtccgttttgggacgaggtagtggtatttttcatctaactgttaatgattgccattcatttttctacaagctttatcttcaatattatgagtctataacattctctattccaatgtattctacccaaaataattaggcacggccaagtacatagaggttattaccttaatttttacagttcaaggtcaagaccatactttataaccaaacatttggttgtttgatgattaaaaggaaataggaccatcagaccccatgcattaatagaggacagatttgagcaaaactcagcttttaaggatctaatctacctcaagcaaggctgtattctcttttcatgccaagtgaaaactaggcaggtgcacttgctccggcacttcattttcttcttcagtccatactcatgcaagtagcttgcttggatgattttgagtaaatttaggatgttactggagggcacaaaggaattcaggtagatcaagctattgtgcatgtaaaatgtgtatcacatagatccaacatttcgttccattctatttggtggagactggcccagaatacttatggtaacttgtcaaagacagcagcatgtgagagtgactatgcaacaaatcttttgcattggtaatatgcaactatctggagcagatcatgcagaaattaagcgctagcaagaaaatgtttagggagaaatggcatatttaagctcacgataaagtaatccttgaacattaagatcaagaacagctaaaacatcacatgttatcaaatatacacctgtcttatgaaatggcccaaatgagatgacagcagacttttggaataggaaaagccagctaacttgttagttgtcacctttatttaagtagtcttgagcttactcttattctcacactctctcagcccattctgttccttctcatccctctttctggtgtgtagtgtgtccaataattaggaagcagggctggttgcttctgcgataggagaaaactgcaaaccagtgtaggggcaaaaatggctgcctgctgacaagttctagttcacagtcaataaagccattcaccttggaagtgactccctattctgatcagcagtcatacacaaattcatgcagtgtatgatcttggtctccatgcatgaactctgctaccccacattctgaagattaactgatgcttagatatgtgcatggcaaagtaatacactagttcgtgagtatttccttcaggacacttatgttctttctttgtttggagtactgaggcacctcaccaatggagataaagatgaaggggatattcaaaggtttgaagataatctctcaaatattcggtaagcgaagcagattgtttatctttgctgcatctacctctattttcagtttttgatgaattagctgaaccacaatagcaatgcacagtttctataccattggttatataccagtatgaccattgctccctttcggttatccagcactgcagaagcaacaagagatggaaatcgggtgccctacagacgtcaggcatgtgtctcacataggcgtgggcactagtgattcatgcccaagctgggtaaggatctcatatctcatagctggaaggtttctccaagtaatcttctttgcaatgatctatacattttcctattctctggttgtgattttttatggcaattttactagatgagtgaattcagaggattggaagagttgtcagcaggctccatgggctcctttgcacagtcaaggaagacatcctgggcatctcaaggcaagtatctccctcgatctcttccttctgtccacttatgcgctcctttttcagtgtttgctcttcatgaagttttcagtcgggacgggacgctaatgatgtctgaaacctttgctcatgcaagaaagcataactagtcatgtacttgtgtctagctagttgattcagaatctacatactccagtacaagcttgaaccttctgttctacagtagtggcataccataccattgctctgtctgctcttctccattaattctggttttggaaacttcagcctagtttggtgtcaaggtagacttgattgtcatatcagcacttgcacccttttttgccattgtctgtccccatcctggtggaatgcgatgttcagacttgcagcgtcgccccttgctgactaactctggaggagtgatatgtcggatctttcgtgggaaatcttgtgttgtcaggggaccaaacgtcggtgagtgaggtggcgtgcctctctacagttcgtccactgatgcagctccgatctcttgactgagttggatgactgaattcatgctttttttcttctcttgaaagagtttcatcatgattttagtgggttatgatgtaaaccctgcacaatctgcttttgcccaacccgtttagcaaacagaatttcagaagtcatgagaaaggttaagtcctcaggagttctctttgcgattctcgacagaattgaactgattttcataaaattcatgtagaattcccatatccccgagaaggcctaacagtctttctggtgaatcataccattctttaacaaatcatgtcaccctacctcctctcatttcattatgttttgtctttgaattgctgcagattttgacaaaccaccaagagccacgctcccaacagaagtctgcacagacaaatccggccaggaggccgcctcctgctgccatgacatcccgagaggccccaagaacccgaggaggaagaaggcagcaagagcatcatccgcgagctccttcttgtcgaggtcaaggtcctcctcgtttgtgacagcgtgcggtgatttcagcgagttgcgtggcggcctccgagtcgcctagtttgaatgacagttcatatagttttctggtgtgtgttttcttcgtgctgttcgatcaggaggagaataaaatcgcctgaaataatcgtatgagcgttgtgatggatgctaagcgtctagattagggacatgtgtaatgtgtccatgactgaacaaactatgcattgtactgctttttttgagttttggctatttctgaagtttg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0681300, RefSeq:Os06g0681300