Os09g0518500

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Revision as of 07:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0518500| Description = Ankyrin repeat containing protein| Version = NM_001070222.1 GI:115480186 GeneID:4347595| Length = 4046 bp| Definiti...")
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Gene Name

Os09g0518500

Description

Ankyrin repeat containing protein

Version

NM_001070222.1 GI:115480186 GeneID:4347595

Length

4046 bp

Definition

Oryza sativa Japonica Group Os09g0518500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20890141..20894186

Sequence Coding Region

20891105..20891513,20892165..20892574,20892960..20893829

Expression

GEO Profiles:Os09g0518500

Genome Context

<gbrowseImage1> name=NC_008402:20890141..20894186 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20890141..20894186 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaggcaatccagcagccggctcggcgctctggagaagctgaagagcttccgggggatagagaagcagagaagcttcaagttcctgtccatggagaagcagcagagcttcaagaggaacaaggacagccctgggaagaggggtgacaccgagctccaccttgcagcaagggctggcagtgtcccccatgttcagaagatcttcgccgcgagtgatccggagctggtgggggaattggctgctcgtcagaaccaggacggcgaaaccgcgctgtacgtgtctgccgagaaggggcacactgaggttgtgagtgagatactgaagttttgtgatctgcagtcagcagggctcaaggctactaacagtttcgatgcgttccatattgcggcgaagcagggccatctggatgttttgaaggagctcttacaagcatttccagcattagctatgacaacaaattccgtaaatgccactgctttggatactgctgccactcagggccatattgatattgtcaatcttctgctggaaacagatgcaagcctagccagaatagctagaaataatggcaaaacagttttgcattcagcagcaagaatgggtcatgtggaggtggtaacagcattgttaaataaagatccagggattggttttagaacagataagaaaggacaaacagcactgcacatggcttcgaaaggccaaaatgctgaaattctgcttgaattgttgaagcctgatctctcagttatccatgtggaagataacaaagggaacagagcattgcatgttgcaactcggaagggcaacaccgttatagtccagactctaatatcagtcaaagagatcgtaatcaatgcagttaatagagcaggagagactgcttttgctattgcagagaaactaggtaatgaagaactttctaacatcctgagagaggttggtggtgaaactgcaaaagagcaagtaaaccctccgaattcagcaaagcagcttaagaagacagttagcgacattaggcatgacgtccaatctgggatcaagcaaacacgtcagaccaagatgcaattccaaaaaatcaagaagaggattcaaaagcttcacattggtgggctaaacaatgccatcaactccaatactgttgttgcggtgcttattgccacagttgcctttgcagccatatttactatccctggtaattttctggaagatatgaaagatccacatgatcccaacatgaccttagggcaagcatttgtagcaagcaatccggcatttataatcttcttggtatttgatgccttggctctttttatctcgcttgccgtcgtcgttgtccagacctctctaattgttgttgagcagaaagccaagaagaagatggtctttgtgatgaacaagctgatgtggatggcatgcctttgcatctcagcagccttcatagcactaacatatgtcgtcgtgggccgtgatgatcggtggctagcttggtgtacaatggcaatcggcaccgcgatcatgctggccacccttgggtccatgtgctactgcattatcgctcacaggatggaggagaagaacatgaagaagatcaggaggtcatccaccagccagtcgtggtccatatcagtcgattcggatacagagctactgaacaacgaatacaagaagatctatgcactttag</cdnaseq>

Protein Sequence

<aaseq>MERQSSSRLGALEKLKSFRGIEKQRSFKFLSMEKQQSFKRNKDS PGKRGDTELHLAARAGSVPHVQKIFAASDPELVGELAARQNQDGETALYVSAEKGHTE VVSEILKFCDLQSAGLKATNSFDAFHIAAKQGHLDVLKELLQAFPALAMTTNSVNATA LDTAATQGHIDIVNLLLETDASLARIARNNGKTVLHSAARMGHVEVVTALLNKDPGIG FRTDKKGQTALHMASKGQNAEILLELLKPDLSVIHVEDNKGNRALHVATRKGNTVIVQ TLISVKEIVINAVNRAGETAFAIAEKLGNEELSNILREVGGETAKEQVNPPNSAKQLK KTVSDIRHDVQSGIKQTRQTKMQFQKIKKRIQKLHIGGLNNAINSNTVVAVLIATVAF AAIFTIPGNFLEDMKDPHDPNMTLGQAFVASNPAFIIFLVFDALALFISLAVVVVQTS LIVVEQKAKKKMVFVMNKLMWMACLCISAAFIALTYVVVGRDDRWLAWCTMAIGTAIM LATLGSMCYCIIAHRMEEKNMKKIRRSSTSQSWSISVDSDTELLNNEYKKIYAL</aaseq>

Gene Sequence

<dnaseqindica>965..1373#2025..2434#2820..3689#gttccgtttcgcagtcgtcgtcgtcgtctccgatgatgataagctgcgactgcgagatggtggtggaagagcactgggaatcaacctaaccagcagcagcagcagccacagcagtgagcttcttccaggccacagaaagagagagagagaggggaccaactgaaaagagagagaagctagaaggagaggagtccaaacttccaagacacccactactgctgctactgtgttcgtgttcctctcttggcctctctcttggttcgtgttccttccttctttctttgcgagaaagaaagatgggattctgggagcgctaggttttcctgctcatctgattcttggttctacatccagttcttgggtgtgtttttcttttcctttttctccatgcgcttcttgtggtgagtggttctgttcatactcgttgcttgttgggggcacaagtgttgtgtgtgtgtgtgtgtgcgcgattctctctttcatttccgattttgtgattcaagcctactcattttatgttcaatctttcagttttgtgttgggatcatgggggaaatatggtatgcatcttgatcaagttcatcctcctttttgcagtttgagaagtggtcggtaatctcgagggaagtacggagccacgcggttccaaaatctcccgtcttggcctggttcctgttgacgcggcagatgattttcacggagaaatttgagagcttcccgtagtttgatgttccaagcagccaaacctaaggagctccagtggtgaggagaggggggcaagatcaaatctcggtgcatatttctgcaatccgaagactgtgatattttgcaacaaccagagctgaatttgccaaagtggaggcagtattgggttcttagacttctcagggacaagatcttgcattggacttgaaattcacaacaccatcgaactgaaagaacagtagtttgttggatttgggggatggagaggcaatccagcagccggctcggcgctctggagaagctgaagagcttccgggggatagagaagcagagaagcttcaagttcctgtccatggagaagcagcagagcttcaagaggaacaaggacagccctgggaagaggggtgacaccgagctccaccttgcagcaagggctggcagtgtcccccatgttcagaagatcttcgccgcgagtgatccggagctggtgggggaattggctgctcgtcagaaccaggacggcgaaaccgcgctgtacgtgtctgccgagaaggggcacactgaggttgtgagtgagatactgaagttttgtgatctgcagtcagcagggctcaaggctactaacagtttcgatgcgttccatattgcggcgaagcagggccatctgggttagttcttttcttcatcactagtgattcatttatctttatgcccccaaaaatgatggtttgtttatttgatccttataagtcatgccaagtcaatgagttcctgctgataggttcatgtcaattgaaattattaagcatatgggtattatatgagctgaactatgcatattggtttgattgtgctcacagttgtctatgtcgaactacttgtcttggattgacttatccaaatccatatagttgcacaaggatatttcccaattatttcctgaagggcatgcattactattgcaactgcactcttaatttgtagcaatttttcttggctgatttggtctaaattattactacatgtttatttttcttagtgtaaccaaaattgcgaatgcattgacagttctagtctgtgatgtgttgcaataatcacagatttgccaatccgaaaggatgcagtggctaactggctgctaatcctctaacacagatttagtgataacaaagtgcttgatcttccaaaaatatgtctttatccctgagttagaaataagacaatgcttatattttactcagctagcacaatgttttgtttagattgatttgtcaaagcatctctggctcatggagaaattccatttattggctttgcagatgttttgaaggagctcttacaagcatttccagcattagctatgacaacaaattccgtaaatgccactgctttggatactgctgccactcagggccatattgatattgtcaatcttctgctggaaacagatgcaagcctagccagaatagctagaaataatggcaaaacagttttgcattcagcagcaagaatgggtcatgtggaggtggtaacagcattgttaaataaagatccagggattggttttagaacagataagaaaggacaaacagcactgcacatggcttcgaaaggccaaaatgctgaaattctgcttgaattgttgaagcctgatctctcagttatccatgtggaagataacaaagggaacagagcattgcatgttgcaactcggaagggcaacaccgttgtaagtgataatatcttggtgaaatattctattttctgccatatttttggtcgttatgttacaaatgttaatattttcgtcatttgtcttatttctggttgaactcacgttggccatgaaaatttggaaacagaagttcatctgctcactgaatactaaatgttctataaaggaattccgtaatagaaaactcaaatttgtttcgggaataaaataaattgaataaggaggagtgaaaaaactgtggagcttagtaaaaccatgacttctaaaatcttttaaccagaatgttgagggacaatattgtactcctatgtgcctagcatttcaaatcattttcagttcttacttgtacctttgctaatatttgtgtaattccttccagatagtccagactctaatatcagtcaaagagatcgtaatcaatgcagttaatagagcaggagagactgcttttgctattgcagagaaactaggtaatgaagaactttctaacatcctgagagaggttggtggtgaaactgcaaaagagcaagtaaaccctccgaattcagcaaagcagcttaagaagacagttagcgacattaggcatgacgtccaatctgggatcaagcaaacacgtcagaccaagatgcaattccaaaaaatcaagaagaggattcaaaagcttcacattggtgggctaaacaatgccatcaactccaatactgttgttgcggtgcttattgccacagttgcctttgcagccatatttactatccctggtaattttctggaagatatgaaagatccacatgatcccaacatgaccttagggcaagcatttgtagcaagcaatccggcatttataatcttcttggtatttgatgccttggctctttttatctcgcttgccgtcgtcgttgtccagacctctctaattgttgttgagcagaaagccaagaagaagatggtctttgtgatgaacaagctgatgtggatggcatgcctttgcatctcagcagccttcatagcactaacatatgtcgtcgtgggccgtgatgatcggtggctagcttggtgtacaatggcaatcggcaccgcgatcatgctggccacccttgggtccatgtgctactgcattatcgctcacaggatggaggagaagaacatgaagaagatcaggaggtcatccaccagccagtcgtggtccatatcagtcgattcggatacagagctactgaacaacgaatacaagaagatctatgcactttaggataacaatataacctgtggtcgagtcttgtatatatcgaagcccgtttgcctgatgaaactccatggcattcagcggagtttgactcacaaagtatatttaggcctagaacatggcagctttgtgcaactgaagcctccttttgtgtagagaaaggaggccatccatctcactgcatttgctactatatagattccaggtgatactttgaagcagccacttttttgtaggcatcataggagtattggtaaagcagaatgtactcttaatgctcaccaatgtgtatctgtggatgatgataatgaaaaaccatgcaattatactagtatagatagtggaataaactgccattttctg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0518500, RefSeq:Os09g0518500