Os06g0681600

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Revision as of 09:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0681600| Description = Haem peroxidase family protein| Version = NM_001064914.1 GI:115469559 GeneID:4341861| Length = 11410 bp| Definition...")
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Gene Name

Os06g0681600

Description

Haem peroxidase family protein

Version

NM_001064914.1 GI:115469559 GeneID:4341861

Length

11410 bp

Definition

Oryza sativa Japonica Group Os06g0681600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29291036..29302445

Sequence Coding Region

29291064..29291288,29291385..29291576,29291658..29291820,29301795..29302228

Expression

GEO Profiles:Os06g0681600

Genome Context

<gbrowseImage1> name=NC_008399:29291036..29302445 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29291036..29302445 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaatggccgcgccgctgacgttggtggtggtggcggcggcggtggccgtcgtcttcgtcggcggcggcgtggaggggtgggtgctcaaggaggggttctacgagcagagctgcccgcgcgcggaggcgctggtgaagcactacgtggagcagcacgtccccctcgccccctccgtcgccgccaccctcatccgcacccacttccacgactgcttcgtcagggggtgcgacgcgtcggtgttgctgaacgggacggacggggcggaggcggagaaggacgcggcgccgaacctgacgctgcgggggttcgccttcatcgaccgcatcaagagcgtggtcgagagcgagtgccccggcgtcgtctcctgcgccgacatcctcgcgctcgccacccgcgacgccatctccgtcatcggcgggccgttctggcgggtggcgacggggcggcgcgacgggagggtgtcgatcaagcaggaggcgctggaccagatcccggcgccgaccatgaacttcaccgacctcctctcctccttccagagcaagggcctcgacctcgccgacctcatctggttgtcaggggcgcacacgatcggcatcgcgcactgcaactcgttcagcaagcggctgtacaacttcaccgggaaaggcggccccggcgacgcggacccgtcgctggacgcggagtacgcggcgaacctgcggcggagcaagtgcgcggcgccgtcggacaacacgacgatcgtggagatggacccgggcagcttcctcaccttcgacctgggctactaccgcggcctcctcaggcgccgcggtctcttccagtccgacgccgccctcgtcaccgacgccgccgcggaggccaacatcgccagcgtggtgtccagcccgccggaggtgttcttccaggtgttcgcgaggtccatggcgaagctgggcatggtcggcgtcaagaccggctccgagggcgagatcaggaagcactgcgccctcgtcaacgacatccactactag</cdnaseq>

Protein Sequence

<aaseq>MAMAAPLTLVVVAAAVAVVFVGGGVEGWVLKEGFYEQSCPRAEA LVKHYVEQHVPLAPSVAATLIRTHFHDCFVRGCDASVLLNGTDGAEAEKDAAPNLTLR GFAFIDRIKSVVESECPGVVSCADILALATRDAISVIGGPFWRVATGRRDGRVSIKQE ALDQIPAPTMNFTDLLSSFQSKGLDLADLIWLSGAHTIGIAHCNSFSKRLYNFTGKGG PGDADPSLDAEYAANLRRSKCAAPSDNTTIVEMDPGSFLTFDLGYYRGLLRRRGLFQS DAALVTDAAAEANIASVVSSPPEVFFQVFARSMAKLGMVGVKTGSEGEIRKHCALVND IHY</aaseq>

Gene Sequence

<dnaseqindica>29..253#350..541#623..785#10760..11193#gtcagagaaagcagctttgagcttagctatggcaatggccgcgccgctgacgttggtggtggtggcggcggcggtggccgtcgtcttcgtcggcggcggcgtggaggggtgggtgctcaaggaggggttctacgagcagagctgcccgcgcgcggaggcgctggtgaagcactacgtggagcagcacgtccccctcgccccctccgtcgccgccaccctcatccgcacccacttccacgactgcttcgtcagggtaagcgcgtatagctcgtcgatcgatcggcgtggcgcggcggcggaattctgacggcggcgacggcggccatggcgtggtggttttgaattgtaggggtgcgacgcgtcggtgttgctgaacgggacggacggggcggaggcggagaaggacgcggcgccgaacctgacgctgcgggggttcgccttcatcgaccgcatcaagagcgtggtcgagagcgagtgccccggcgtcgtctcctgcgccgacatcctcgcgctcgccacccgcgacgccatctccgtcatcgtaagctagcacctcgctcctcctcctcctcctctcccgcatttgcgatggccggcgagctggctgacggcgagcgagcagggcgggccgttctggcgggtggcgacggggcggcgcgacgggagggtgtcgatcaagcaggaggcgctggaccagatcccggcgccgaccatgaacttcaccgacctcctctcctccttccagagcaagggcctcgacctcgccgacctcatctggttgtcaggtaaactaactattcactcttccatatattaatttcagtattaatttcaccatccatttcagagttcagacttcaccatcaatagtatttccttcgttccaaaacaactataagtttccgcgcccaactttaatcgtccatcttatttaaaatttttttataattagtatttttgttattataagatgataaaacatgaataatattttactcgtaacttatgtttttaatttttttcaaaaaaaaattcaaataagacggacggtcaaagttgaacgcggaaaaccatggctgtacttaaaatgggacggagggagtaaacatttttagactttgacatagtctttgagatggtattttgatcaacaatatctataaaagtgagatgttttaaataaaaaaaagttgtaatagtttgttaatgataagtctagtaacatcaattttacatgattgatttttttttatttttttactattaatagttaaaattaaaaatgtttgacttgacactattctaaaattgcttatattttgaaaattagttgcggtcgatcaaaaccccagtttcagcttatgacagcatcgtttctgaaaagaaaagtaaaaccattcacctaagctaatgattggttaacttgacacaaacggcagccaaagatcgattttcacgttatatcctaattaagtcgattgattactagtcttcaggatacacaactcgatcaggtttggtgttttatctagcttgatgtagctagctatgtggtgtttgcaaatgcgtagtacaagccaccgacaaatagtgaattggtgatgtgatatcgtgctgcaaaatctgcaatatgcagagaacgatagttaacttttgcaaattctttgtgtgttgagtcggcaactaggacacgctctcactctcactcacatcacaccccagtaatgctgtccccaaagattcagaagatgaaagatatatagcctcaatcacaccgatttccatgtagtaacaatactaacaaacaacgatcctaataggaacactacagatgccgaatttctatccattatctaaaaaactctcgtgccacgacaatccagaattgaacagacagctacgtccaacagggagggttggatctacttaattcatagaaggccaaaacttagctgaatcttgttcacgggtatcgcatcaaatcaaagttaaaaacagtttagtaggtatagcgatctaaccaacagataacgaggcttttagttgacggctggcaagtctgttccgtgcaataaaatgcaattcataacactgcactataacaaatatatcttatagagatattttcatttttctaatactatagaggcatttttaaaatgcctttacaatgttatagagacattttgaagagtgtctcataagtgccttttggtgaattgtcgcatttttaaaatgcctttacagtgttatagagacattttgaagagtgtctcataaataccttttggtgaattgtctctacaaactaagaggtgaattgtctctacgaactaagaggacattttgaagagtatctcataagtgccttttggtgaattgtttctacgaactaagaggcattttataagatgtctctatgcaaatagaggcacgcactaaccatctcaacctcatataattatatgtaagtatgtgatttgtgttacttatatctagttacttgatatatattaatatttgaaaaaatgcctttacatcgttttaaatgccttaagaaaatgcatttacatatgagacaaattttaaagtgccgaaaatgtgtctctacgagataaacttaacaaagtatactaaaaatgtctctagagtaaaaatattttagacgattttgaaagtgcctctaaaaagtgtctctagactatagagcttcaaaacttagaggcattttaaaaattgtctctacaaaagattctttatataaggtttttgatgtagtgctgttttatttagagagtgtagcacagatattgacacactaactgaccaagatttttattaacgttagtggttaaaggtgtgcaaaaaatgccaagacaaacattcagctcttgtactgtcctgtatctgtacttgtgagttagtagcaaattagtagctagctagattctataaaaggggggaagtgatgcagcttatataagggagaaacgtgatgtaactggcctcctacttctctgagagagtgactatttactaatccttaatttgaaagatcaagaaatgagttacattgtatttattcaatgtgtaaaagctgaaataatatatacatacacgtcaagtgcagagggcatgcatatgcctactagctgttgagattatgggcatataatgatttaatttattccataaataaatcatgacattacagatgaaaactagcatgaacgcatcattagatctacacatgtaaactacgtagaaaaacatgaacagaccaaatatgcgcaacatattgaacacgtaccgaggtgacgaaaaaaccggctgcttggtcgaaacttttcgcaggtgtctacgaaggcacgaaacacgcgagcgaagaggaaggcgagccgtcgcgaacgaacagggagcagtcgcgcgaagcgcttcccaaaaaccttattgccgccttctcccggtgcaggacgtcaaaggcagaggttccggagacctgctctcccgatcgctggtgcacgccggcgagcgggatggagtagtctacgagcgacggcgcagtacagagtaggaggcaaaccctagattgattttcgcatatattgcgtgaagacggcgggtcggtttatatagagaagggtcgcttgatcagggcgcccgcacgatctctactgcgcgtaaccgaaccggataagtcgcgcgtaacttatccggactccacgccgtttgcacgcatcggatttttcggaacgtttccaaaacaaaaacgaatccgaatttgcagcaaaacaaaactgcaaaaggaggctgcatctgcgcaagggtgaggagccaatttttcggaccattcgacgcgtacgtcgtgcacgcgcgccgcctgccctgccctgccaggccaggcgaggcgaggcgagcgagcgcgcgtgtgtttcccctcttctctccaccacacatgcttcaagtggctaggagggcatcctcccttttaaggaggtccccctctcctagaataagcaaggtggtactaaactccacatgcatgccatcctatgaggtgggcttttgtgattttccaaagaattaatcttcgagtgggctaaggcccattcattaattccaacaatcccccaccaaatctcaaaatcccactgagatttgccttttccaatgtactgtttatataccagcggttcgatggagaccaattaaggttgaacatccacctagaactccaagctacacttactcacaacttgaacaatggactacgccttgaattgcaagtcttgtgcaagcaagtttcactcaaagtcttatctggtactagaccgtctgtagactacccctcgggtggagcgtataagtcatactcctaggtctttagtaagcttcctagaagattcacccaaaatcttcatggactgcgaccaacagtcaagctcacaaaggtgagttccttcaagaatgctctgcaggacaacatctttgctaattaaagccaacagaactcattaaggcatagccaacctgccttgcagctcacgagagtatatgcatcttcacttagagagggtatatatattggtactctcctctagtttattaatggtttgttcttcccaggatctaattcacgggatctccgatcacatagactgggttaccaccatagtataactcacatgggtctcaaacccatctccttcgatgcattgtctatcacatttcgtgatagtcccttcgtgaagggatctgccaggtttctcgctgtttggatgtaatccaacgttataactccggagtttcttaatttcctgacagacttcaatcgtcttttcacatgtctagacgatttcatattatccttagaactattcactttgacaattaccgtttgattgtcacagttcataaggatagccggcaccggtttttcaacaacaggcagatccattaatagatcacgcaaccattctgcctcaacagtagcagtatccagtgccgttagctctgcttccatggttgacctcgtcaaaattgtctgtttgcaagacctccatgaaacagcaccaccacccagtgtgaaaacatatccactagtggctttgatctcatccacatcagagatccagttagaatcactataaccctccagtaccgcaggatacccagtatagtgaagccccaattccacagtacctttcagatagcgcattactcgctcaagcgcacgccagtgatcatctcccggattagaggtaaatcggctcaacttgctcacagcaaaggagatatcaggcctagttgcactagccaggtacatcaacgagccaatgatttgggagtattccagttgattcctagcaattctcttgttcttgcgaagcgacaagctaggatcataaggtgttggagaaggcttactatcaatgtagccaaagcgattcaagatcttctccacataatgagactgcaagagtgtaatcccattctcacctctaattagcttaatgtttaaaataacatcagctactcccaaatctttcatatcaaaattttgagacaagaatgatttaacctcatttatcacctcaaggtttgtcccaaatatcagtatgtcgtcaacatacaagcacaaaataactccctcacccccaccatggtgatagtacacacatttatctgcctcattgactgcaaagcctgcagatgtcaatgttttgtcaaatttctcatgccattgcttaggagcttgtttcagaccatacaaagacttcaacaatttgcacactttgccttcttgaccttcaagtacaaacccatcaggttgatccatatagatctcctcatccagctctccattaagaaaagctgtcttaacgtccatttgatgaacgagaagaccatgtgaggctgctagggaaagtagcacacgaattgtggtcaatctagcaacaggtgagtaagtgtcaaagaaatcttcgccttctttctgagtatagcccttagcaacaagccgagccttgtacttttcaatagtaccgtcaggcctaagcttcttcttgaacacccacttgcaccccacaggtttacacccatagggtcgctctgtcacctcccaagtcccgttagcgataatggaatccatttcactacggacagcctccttccagtagtctgcatcaggagatgcatatgcttctgaaattgacttaggagtgtcatccacgaggtacacagtgaaatcatcaccaaaagacttagccgtcctttgtctcttactccttcgaggagcttcactgacatcctcctcagagacaagttcatgtgtatgttcagtttgttctggtggtgtgattgaactgggaattatttcagagggttggttcgaaccactatgtgtatccttcattgggaaaaagctctcaaagaaggtagcatcacgagactccataattgtaccaacatgcatgtccggtacctcggatttaactattaaaaatctataggcaatgctatgatgagcatatcccagaaaaacacagtccacagtcttaggtccaagtttgcgcttcttcgttattggtacattgactttcgccaagcacccccatgtgcgcaaataagaaagtgatggttttctaccaatccatatctcatatggtgttttgtccttatttctgttaggaactctgtttaacacatgatttgaggtcaacaatgcctccccccaccatgccttaggcagtcccgcggtgtccaacatggcattcaccaagtcagtcagtgtgcggttcttcctttcagcaatcccattagactcgggagaatagggaggcgtcctctcatgtatgatgccatgttcctcacagaataagtcaaactcgttcgagaaaaactctccaccacgatcagacctaagcctttttatctttctgtcaagttgattttcaacttctgccttataaattttaaaatagtctagagcctcgtctttcgttttcaacaagtacacatagcaaaatctagtagcatcatcaatcaatgtcatgaaatatcgttttccacccttcgtcaacaccccattcatttcacaaagatctgaatgtaggagttctagtggtgccaagtttctctcctcggcagccttgtgaggcttgcgaggttgcttcgattgcacacaactatggcacttagaacctttgacaatggaaaacttaggaattaaacacatgctggaaagccgagacatcaagccaaaattaatatgacataaacgtgaatgccaaacattagcctcatcatccacactgccacaaatatggttcacagacttattgcagaaatcagaaagggaaaagcggaacaggcctccgcactcataacctttaccaataaaatatccatgtttagacacgactactttattagactcaaaaaccaacttaaatccgtctctagtcagacgggagccactaacaagattcctgtcgatagaagggacatgctgcacgttcttcagctgcacgatctttcccgaagtaaactttagatctaccgtgccaacaccatgaacagaagcatgtgacccattccccattaggacggtggaaccccgtgcgacctgataagaagaaaacaatgagatgtcagcacaaacatgtacattggccccagtatcaacccaccaattagtagattgattaactgaaaaaacagtaggtaaattaccatacccgcttccatctccagtgttgccaatggtcacattagcagacttagaagtctgccctgcaggtgccttcatccccttgcgttgtggacacttcctagccagatgaccaacttggccacacacaaagcaagtcctctcatcctgattaggattgttgttgttcttcttctgcttcttgaagttggtggtctgctgagctttgtatttccccttgctcttgttctgggccttgtgcacaacattggcactggactgcccaccatcgcccttagacgcggcatctttttcccgagctttctcctcaacatcaagagacgcaatcaacccctcaacggagtattcctgtctcttgtgtttgagtgcagtaccgaaactcctccaagatggaggtagttttgcaataatgcacccggccacaaatttgtcgggtaagacacacttaaggagttcgagttccttagccatggtttgtatctcatgagcctgttcgactacagaacggttgtcagccattttgtagtcatgaaactgctccatgatatacagatcattgctagcatcagtagcaccgaatttagtattcagtgcatcccataactccttagcgtcggtcatatgcatatacacctcgaccagacgatcgccaagaacgctaagaatgcatcccacaaagagagtagtggcttcctcgaattgcttctgctgttcagcagtaagaactccttcaggtttgccagtactcacccagaagcatttcatagctgtcagccacagagtgaccctgatctgccatctcttaaaatgcacaccggtgaatttatccggcctcagtgcatcggcaaaaccagccatagtaaaatcacagtgcctataataaggtttttggattgttgagattatgggcatataatgatttaatttattccataaataaatcatgacattacagatgaaaactagcatgaacgcatcattagatctacacatgtaaactacgtagaaaaacatgaacagatcaaatatgcgcaacatattgaacacgtaccgaggtgacgaaaagaccggctgcttggtcgaaacttttcgcaggtgtctacgaaggcacgaaacacgcgagcgaagaggaaggcgagccgtcgcgaacgaacagggagcagtcgcgcgaagcgcttcccaaaaaccttattgccgccttctcccggtgcaggacgtcaaaggcagaggttccggagacctgctctcccgatcgctggtgcacgccggcgagcgggatggagtagtctacgagcgacggcgcagtacagagtaggaggcaaaccctagattgattttcgcatatattgcgtgaagacggcgggtcggtttatatagagaagggtcgcttgatcagggcgcccgcacgatctctactgcgcgtaaccgaaccggataagtcgcgcgtaacttatccggactccacgccgtttgcacgcatcggatttttcggaacgtttccaaaacaaaaacgaatccgaatttgcagcaaaacaaaactgcaaaaggaggctgcatctgcgcaagggtgaggagccaatttttcggaccattcgacgcgtacgtcgtgcacgcgcgccccctgccctgccctgccaggcgaggcgagcgagcgcgcgtgtgtttcccctcttctctccaccacacatgcttcaagtggctaggagggcatcctcccttttaaggaggtccccctctcctagaataagcaaggtggtactaaactccacatgcatgccatcctatgaggtgggcttttgtgattttccaaagaattaatcttcgagtgggctaaggcccattcattaattccaacactagctagtagtttgcgtcattgattctcaaaattttcatacaaatataccccctcctcctcacatcgatctcttcaaaatccttatattatgggatggatggagtagatagatactatgtagtaccagtgagcaatgatagttgtgatgtagacatgcatctgcatgccacagctaattacaccctcgtgttgatgtagtcacgtagatgtcagcgttaaatggatgttttgatgttttctgaagttgtagtatagtactccgtagtaggtctaacgttgcattcttaattaacactgcatacatatcacttaagatattcctagcttagctaccgtccacatacttgaggttcctagctagatgacaatactacgtgcaagccattgcaggagctgaatatcttgtagtacttgcgcatagttgcatggtccagaaaaacagatatccagtacatctctcgttttctcccattaattgcagagtactgggtatctgatcagttaatgaaatccgcaaactgctgaacaaccatctacctgtagatttcaattgaggatttggactaagataatatacaaatggtttttaggtacaaacttcagagaaactgcacttgcactggttttctatgaaattcaaccactcagttttgtcaccgaaccatttgaaatgggttatttggattattttcatataaggataaactaaatacttttagaaataaacttacttaacaaaataacaaatactatgctgagtgaagaagtatagtgctgtagaataagtagtttagaagcaatatcatagaaaaaaaagtttttcgagaaaacatttctttttagacgtggagtaaataatctaatatagtaattgaaaagcactctcttcgtttttttaatgaataacactgttcacttttaaacatatattttatcattcatctattaaaaaaattttatgtaaatgtataagatataaatcatgcttaaaatactttaagtgataaaacaactaacaacaaaataaattataattacgtaaatttttaaaaagatgaatggttaaacatgtgataaaaagttaacggtgtcatttattaaaaaacgaacgaaggtagtagatgcttttaatttacttctgaactcactaattgagttgatgggtgcaggggcgcacacgatcggcatcgcgcactgcaactcgttcagcaagcggctgtacaacttcaccgggaaaggcggccccggcgacgcggacccgtcgctggacgcggagtacgcggcgaacctgcggcggagcaagtgcgcggcgccgtcggacaacacgacgatcgtggagatggacccgggcagcttcctcaccttcgacctgggctactaccgcggcctcctcaggcgccgcggtctcttccagtccgacgccgccctcgtcaccgacgccgccgcggaggccaacatcgccagcgtggtgtccagcccgccggaggtgttcttccaggtgttcgcgaggtccatggcgaagctgggcatggtcggcgtcaagaccggctccgagggcgagatcaggaagcactgcgccctcgtcaacgacatccactactagtattatcactagctcatcgatcttcagctcctcggtgcttgataaaatttcagtagaaatatatatacatgtaacttaattcgatcgtcatcctgtttattctctctctctatgtaattttgtttccaaattgtaactgttttattttggagcaactgtaactatttctgtatgtgcccatgaatatatttcaattatagaaaataattcacttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0681600, RefSeq:Os06g0681600