Os06g0682800

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Revision as of 09:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0682800| Description = Zinc finger, CCCH-type domain containing protein| Version = NM_001064918.1 GI:115469567 GeneID:4341865| Length = 551...")
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Gene Name

Os06g0682800

Description

Zinc finger, CCCH-type domain containing protein

Version

NM_001064918.1 GI:115469567 GeneID:4341865

Length

5515 bp

Definition

Oryza sativa Japonica Group Os06g0682800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29334972..29340486

Sequence Coding Region

29340101..29340376

Expression

GEO Profiles:Os06g0682800

Genome Context

<gbrowseImage1> name=NC_008399:29334972..29340486 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29334972..29340486 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggagatgatgggtcctccccgccgcggcccggcgtacaagacgaagctgtgcgcgctgtggaggcaaggcgagtgcaaccgcgcctcctgcagcttcgcccacggcgacgccgagctccgtggcccgccgcctcgttccccgttcccgcctcgcggtggacctggtatgcgcgcaccccctctccctcctccccttccccgtctcgctctccccttcccatctgcttttctgcttctcggcggttgccgtgtgctctcgatccgcagctag</cdnaseq>

Protein Sequence

<aaseq>MREMMGPPRRGPAYKTKLCALWRQGECNRASCSFAHGDAELRGP PPRSPFPPRGGPGMRAPPLPPPLPRLALPFPSAFLLLGGCRVLSIRS</aaseq>

Gene Sequence

<dnaseqindica>111..386#gtgctttgctcttctcgtctccccactggccgccgccacgtctcgtctcctcctcctcctcgccgccgccgccgccgccgcgggagaagggttgggttggtgaaagagagatgagggagatgatgggtcctccccgccgcggcccggcgtacaagacgaagctgtgcgcgctgtggaggcaaggcgagtgcaaccgcgcctcctgcagcttcgcccacggcgacgccgagctccgtggcccgccgcctcgttccccgttcccgcctcgcggtggacctggtatgcgcgcaccccctctccctcctccccttccccgtctcgctctccccttcccatctgcttttctgcttctcggcggttgccgtgtgctctcgatccgcagctaggtggctctaaatctgttcttctgcaatggaattactgtctccgccgatgttctattgtggacagattgtgccgattgttttctaggaaattattcagacggagtgaaactgggttgagtgtgatctgctatcagtttgaaaagtttgggggatattcatattttgagaagattcatggtgtcctaccatggccccaagaaagagcattctttttaaaataggagtatacatcgtttcatctgtttatgttggatttcgtttataaatcctgagaggatgggctgcatatgtggggaatatgacagacagtgcgggatgctggttgtacagcgaagtgaaagagatatcaattccatctgcgctgtgtgctttctgcagaaacttttggaaatgttgtggaactgagctagtagtaagagaaaatgattagaagaataccaaccatggtaacatctgacaagagctgccctgtaagataaacactgatgacctggtttctatctctggctacttgttggaagaaatatactctacagcctgcacctggtcatgtgatatcagcactagagtcatttatatacaaaactagagcgtaataattccatcagtttgtgtgatatcattttgttgtactgttttatcgcccatatattatccttttcttatagtactttggctgccaaagtttcatgaacaatgtgacatctttgctaatcatatttttgctactgtacaaattagctgttcccagagagattttctccaaccgactacttgcagaggatgacgcatcctattttcattgcacaccttttcagttggtaatcagacattttatggtcgctggaatgcttatcttgctacaggagatttcttgagggatatcatgtggtttcagtcagatgcatgttatcttaatgtgctaaagcacctagcagcttttgcaactaattgtaacaaatttgctgaatacacagcggcaaggtctcctcttgggctttattcttgcctgccattccaagtatgatcacagaaatataaaatttgaagtcaataccaataatatctggacaagtggaattaggtttgttcgacaatattggaatttggaagatctttcttcgtgataatctcagtatgatgtcaaaaattggatattccatccattattcacttctcatgactgacacgttacaaggtgctggatttattttttaagtggtgcatcatacacgtgatatgtgatcatatattggtctccctcatgcattagtctcattggatctgctcttttatgcccccctggggttatgttggtgcctctgctacttactgataattgaataatcatatggctcaaggttgtggtaagcttaatgggtttgtgtgctgcctcatatgtgtatagctcctctatcttttgtggcatattgcttctttgtacatatatgtatgtaaaaactaccatactgaattgtagggagacgagaccatagacctgatgactttagaggtaggcatctgagaccccataggaggaattcccctgaaagagatgccagggatcatttgttccgtgatcacagaccgcgctctcgagatagaggtaatatgctaccaataaaattcttcgttgtaactagtctattctatttttaaacttctatataatctctgaacttttgtatgttgaaatcttccctgcaggctctagtcattcaagatctcccatcaggaagaggtatggggctagggtatacatacatctttgtaatcgagtccttacatgtggttatgcctgtttttatctattttattgggcatataatctaccttcatgtgaccgaatgacttggttcctgctaattgttaatgccctttgcttgtgatgcacccaagggttagcaggtagcctggggcatgcttatgttaaaggcacttgtgcttgttgatatacttataaattacaaactacacaactacatacacatcagagtatcagacaaatataaacatgttgctcttaggcttccatgcaagtaattatgttcacaggaccattttgttaaatatgcaagctgagaaatgtgtatattaatcctctcatacaaatgattcttttttcaaaattttcaagaaaattattatttgttgcaccatttaatgcagtgtttatacagcaacctactgtagagtataatactatcttatcttgctctgtttaatgagggaaccctttgggtttgttgttttcacgaaagatagttctactatgttgccatgtaaccgctgcatgtttttgtcttgcaatttggtcgtttggtgcaattgtatttatgtattccatggatctttcattgagggaaggcatagaaagaagcttgagggtggaaaaactaattcatcagaaagtttgaactcctctgataacgaagatagaaaaaaggatgatagattcaacaaagctgatgataaacatgataatgaagcacaggtttgattatgatctatgcaatccatctcgctagcaaacagttatagtcgtcccaatgctactgaatctcttttatatatttgcttatgttatgcagctgcaacgcattcaactggatatggaagcattacatgaggagaaatcttcactggaggtataatgttcttcatacatatgttacatgtccagcacaaccattagttacttctgctttattattatatgcatgcacatttgaaaagctgatacctgcactacatggattgtgttgagcattctaccacttggctgcaatttatgtttagtttatataaattttggactgctccaatttttctgttttgttttcctgccttaactataatgattatctgtgggaacttttgtgttgagtaaagttcataagatgttcaatccattcagatataatcagatggctccagatatgatgtgtcaatattgacgttaactgatgctacaattgaacaaattgatggctagtttacctttttaagtgacaaatgatacacttcttgaatctcttttagttgcgcctgttgcacttattgtactcttgaggtgtttcaaattcttcttattgttcattcttgcctgtatgttgatattgtaccctattgatgcatccttcttccttgtattataggtgatactgaatggcaagatcaatgaagcatccaaactttctagcagaatagctgatcttgaatcacaattgaacgatgaaaaagaagcttgcgaaaggttttttatttctacaacacatgagcataatcttctctctttttgacaaaaacatcagtttgtggattcttcagctgattaaaaatatccccatgtcgtctgactattcataatactgctctgtcacttaggatggcctcaaaaacaaagaaactcatcaaagcacatgcacgctatgtgaaagctcaggatgatttaaagaggcaggtttcctgtttgtcacctatctgatctgcatacttctattttgtctatatgagaagacaaccctttttttagtctttacatctattaacacattaaagggggtgcaggtcgcaagctcgttttgagaggttcgctgatttgcttgcttcagataccttgaagccgtgtagcaaggatcagggttctagtgctgctaaggaagatccatataatgcttatgaaatgagtccaagtgatcaacggcagaatcatgaaacaactagaaaaagatccgttgccctctcaactagcgaagaaggaaggaatggtaagctaactagatgacatgtttggagatatctatttaatagtcgaatggtttgtccgtattaacgctgccaactagatattagacacatccatgattttcctctgtggtaaataaacaaatgattgacatcctgttactctcacctgtggcttcttcagggaagaaaaggagagagagttatgacaacagggatcctatgtcagagaaatatagaccagaagatgctctagaaccttttcagagcagcaagggaactgaggcaaaagaactattatctgtgaagaagaatttgggggatggtgacaacaatgagaaaggaaatgttgtttcttctgcaaatgtttttacagatagggtgagatgctttcttgcttattctctttatattctctgtggttgctagttgctcgttgctatttctcagtaaaaattagctaatgttatgattcaaagttgatttcctttttgtttattatcaaatctggtagctcgtttggctagaatcaaatccgataatctaatgtttgttcattagcagctaataaccagaatactataatccatcagtttcaaggttttgctgattggttctaaatgaatcatttgtgttctgtgatccaagtttgataactagaataacttcgtgacaccatatggtaattgcatgatttatatgtatcatatgtgttctttatgatccaaatttgatatctaaaacaactctgacagcatttggtaattgcatgattttcttttatttcttgatctctttccatgttttaattttttttctaatatacgtcctccacataattccctcccactagtattatgcttccgtttccaaacattgccttggtatttttctcagagcatcatcctgacaatttgtgccctattttgcttacagtatgagggcggtgatgatgatgatgttcttgtggactagtaaattcatgcagatggagattgacaaagatttcagcagtaaggagtagggtgaagtatggaacatgcgttcattgccatgccagttgcgttttcacagactaacctgaaactaaggctgccagcctgttatttatcttaatgtatcatttaatacaccgggcattaggaattaagcatctcgataacttctgtggcgaagacgagttgcattgttctcaaacaggttattctcacatttgggcaaactgtgcgtcgttattaccatggattccaagtagcctgtatggataatgtatctggcagcctattcgagttaggtttggtattcatggattcatcattgtgttgtaaatttgtaatgctgcgatctttagcgtctgtgttactacagcatcccatggtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0682800, RefSeq:Os06g0682800