Os01g0941800

From RiceWiki
Revision as of 19:05, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0941800

Description

Phosphoesterase At2g46880 family protein

Version

NM_001051896.1 GI:115442162 GeneID:4326052

Length

2034 bp

Definition

Oryza sativa Japonica Group Os01g0941800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43179186..43181219

Sequence Coding Region

43179447..43179659,43179809..43179983,43180067..43180331,43180499..43180723,43180797..43181067

Expression

GEO Profiles:Os01g0941800

Genome Context

<gbrowseImage1> name=NC_008394:43179186..43181219 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43179186..43181219 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggtgctggcgtcgcctggcggcggccggcgcactgctcgccgccctctgcgccgcgcttgctctggcggtggcggagcaccggcgccctgacaccacggccagcagcagcagccgccggccgctgcggttcgcgtcgggaggagggttcaaggtggcgctcttcgccgacctgcattacggcgagaacgcctggacggactggggcccacggcaggacgccggctccgaccgcgtcatggccgccgtcctcgacgccgagaagcccgacttcgtggtgtacctcggcgacctcgtgaccgcgaacaatctagggatccccaacgcgagcctgtactgggacagagcgatttctccgaccagaggcagggggatcccgtgggcgacggtgttcgggaaccacgacgacatgccgttcgagtggcctcctgagtggttctctcctgcaggcgttccgccgctgcattgcccaccaccgagcatgtcagattcagactgcagcttccgaggaacaccgcgacttgaactgatgacaagtgaggttatccgtaatggattgtcatattcatcaaatggccccaaggacctctggcctgctgtttccaactacgtcttgcaggtgctatcacagaagcgagatgatccagctctgctcatgtatttccttgactccggtggtggatcctatccagaagtgatatccagtgctcaggttcagtggtttcatagtcaatctcagttccttaatccaaatggaaggattccagagataatcttttggcatattccaagtacggcatatgccaaggttgcgccgaaagctaagtccgaaataagaaaaccctgtgttggctctatcaacagggaagaagtagcaccacaagaagctgaatggggtatgatggatgcccttgtcaagagggcttcagtgaaggcaattttcgttggtcacaaccacggcctggattggtgctgcccacacgagaaactctggctatgttttgcccgacacacaggctatggtggctacggtaactggccaagaggagcaagggttattgagatatctgaacagcccttctcaattcagtcatggatacggatggaggatgggacaacgcacagcgatattagcttgagctcctag</cdnaseq>

Protein Sequence

<aaseq>MRCWRRLAAAGALLAALCAALALAVAEHRRPDTTASSSSRRPLR FASGGGFKVALFADLHYGENAWTDWGPRQDAGSDRVMAAVLDAEKPDFVVYLGDLVTA NNLGIPNASLYWDRAISPTRGRGIPWATVFGNHDDMPFEWPPEWFSPAGVPPLHCPPP SMSDSDCSFRGTPRLELMTSEVIRNGLSYSSNGPKDLWPAVSNYVLQVLSQKRDDPAL LMYFLDSGGGSYPEVISSAQVQWFHSQSQFLNPNGRIPEIIFWHIPSTAYAKVAPKAK SEIRKPCVGSINREEVAPQEAEWGMMDALVKRASVKAIFVGHNHGLDWCCPHEKLWLC FARHTGYGGYGNWPRGARVIEISEQPFSIQSWIRMEDGTTHSDISLSS</aaseq>

Gene Sequence

<dnaseqindica>1561..1773#1237..1411#889..1153#497..721#153..423#aagcagcagtgacgtactgacgttaatcgcagctctacccatcatttgcagccaccagcatctgctccggcacgcttctgccaccgccgtcgccggagatccgtcacgcgtccgactccgattgactgaaccgtcggagcacgtacgccgggatgcggtgctggcgtcgcctggcggcggccggcgcactgctcgccgccctctgcgccgcgcttgctctggcggtggcggagcaccggcgccctgacaccacggccagcagcagcagccgccggccgctgcggttcgcgtcgggaggagggttcaaggtggcgctcttcgccgacctgcattacggcgagaacgcctggacggactggggcccacggcaggacgccggctccgaccgcgtcatggccgccgtcctcgacgccgagaagcccggtgcgtgcggcgtcccctcgcctgaaatgtaaaattgcgagttcttttcgctgaaatctcccggaattcgcagacttcgtggtgtacctcggcgacctcgtgaccgcgaacaatctagggatccccaacgcgagcctgtactgggacagagcgatttctccgaccagaggcagggggatcccgtgggcgacggtgttcgggaaccacgacgacatgccgttcgagtggcctcctgagtggttctctcctgcaggcgttccgccgctgcattgcccaccaccgagcatgtcagattcaggtaaacttaagatagttcatttctgaatttgtttcagttcagtcactgaacttcagcgcagaaaaaagaaaaggaaaagaaagaaggcaaccactgtatgctttcaaacaaaagtaatcattcatttgaacttttcaagaaaaccatgtttttaacttgatgtgcagactgcagcttccgaggaacaccgcgacttgaactgatgacaagtgaggttatccgtaatggattgtcatattcatcaaatggccccaaggacctctggcctgctgtttccaactacgtcttgcaggtgctatcacagaagcgagatgatccagctctgctcatgtatttccttgactccggtggtggatcctatccagaagtgatatccagtgctcaggttcagtggtttcatagtcaatctcagttccttaatccaaatggaaggtcagaaacttgtatcaattttgcacatactcaaaattcaagcttctgcaactcaaaattaatgttgtgtaattattctacaggattccagagataatcttttggcatattccaagtacggcatatgccaaggttgcgccgaaagctaagtccgaaataagaaaaccctgtgttggctctatcaacagggaagaagtagcaccacaagaagctgaatggggtatgatggatgcccttgtcaagagggcttcagtgaaggtttgtttcatctgaacatttcttgacatgtatacagaatttcttatcccctgaatcccttcagataacttagatacacaggtcaaaattcagaagacacttactttttatttgttagagaacatatatcattggttgtcattttacaggcaattttcgttggtcacaaccacggcctggattggtgctgcccacacgagaaactctggctatgttttgcccgacacacaggctatggtggctacggtaactggccaagaggagcaagggttattgagatatctgaacagcccttctcaattcagtcatggatacggatggaggatgggacaacgcacagcgatattagcttgagctcctagacttgtaaatgaaatgtagttgctggagttttatttcagacaaataaagagtccaagtaggaaaatgaaggtggacactgtatataattaagctgagcccccttgtaaaattgtaatatatgcgtacagagtaagaaaaggttggcagaaagaaagagaaaagagtaggaaaaatgatgaacctatgggatccactgccacgtgtcaagctacgtggtgccatgtcagatgaaatcaccagaaaaaaaagttacagggagg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0941800, RefSeq:Os01g0941800