Os06g0683900

From RiceWiki
Revision as of 09:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0683900| Description = Conserved hypothetical protein| Version = NM_001064928.1 GI:115469587 GeneID:4341875| Length = 2052 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0683900

Description

Conserved hypothetical protein

Version

NM_001064928.1 GI:115469587 GeneID:4341875

Length

2052 bp

Definition

Oryza sativa Japonica Group Os06g0683900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29372282..29374333

Sequence Coding Region

29372578..29373873

Expression

GEO Profiles:Os06g0683900

Genome Context

<gbrowseImage1> name=NC_008399:29372282..29374333 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29372282..29374333 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggaggacccgctcatcccgctggtccacgtctggaacaacgccgccttcgacgactcctcgtgttccagatcggcttggctcccccaaagccccgccgtcgcggccgtccgcaagggcgacaaggagaatcaccgccccgaggttgttgatgtcgccgccggctacgacgtcgaggccgagatcggccacatcgaggcggagatcctgcgcctctcgtcccggctccaccatctccgcgtctccaagcagccggagcccaaccgcgacgacgctccgatgggggagatggtcgcgaaggtgaggccccggccgaggggcctcagcctcgggcccctggatgtgatctccatcgtcaatcgtgagaagcatccgctgcgcaccaagaagcctccggcgacgcggggcagggggctcagcctcgggcccatggagatcgccgcggcgaaccctagggtgcccgcggcggcgcagcatcagcaacagcaacgcgctggcacggcgcggatcctgaagccaatcaaggagcctccggtgcagcgtcgcaggggcgtcagcctcgggccgttggagatccaccacggcgtcggcagcaaggcaccagcggcggcgcgagccaagccgttcaccaccaagctcaacgccattcgagaagaaacccgaccctccaagcaattcgccgtccccgccaagccatggccgtcgagcaatacaaggcagacactggactcgaggcaaggaacagcagcaagtcgagcgaaggcgaggagcccgagccccaggcccaggaggcaatccaatggcaaggctactgacacaaggggaggcaacaaggtggtggatgagctcaagcccaaaggtgcgtcgtcaagtcagagcggcagcgccgccgccgccgccactgccaagaggatggcggggagctccaagatgagggtcatcccgagccgctacagcctcactcctggcgcttcccttggaagcagtggagcacaggagaggcgacgcaagcagtctctcccaggatcatcaggggatgcgaaccagaatgaggaaatcagagcgaaggtcatcgagccttccaatgatccactctctcctcaaacgatatccaaggttgctgaaatgctcccaaagatcaggaccatgccgcctcctgacgagagccctcgcgattccggatgcgccaagcgggttgccgaattggtcgggaagcgctcgttcttcacggctgcagccgaggacgggcgggcgctcgacgtcgaagcacccgaggcggtcgcagaagcttga</cdnaseq>

Protein Sequence

<aaseq>MEEDPLIPLVHVWNNAAFDDSSCSRSAWLPQSPAVAAVRKGDKE NHRPEVVDVAAGYDVEAEIGHIEAEILRLSSRLHHLRVSKQPEPNRDDAPMGEMVAKV RPRPRGLSLGPLDVISIVNREKHPLRTKKPPATRGRGLSLGPMEIAAANPRVPAAAQH QQQQRAGTARILKPIKEPPVQRRRGVSLGPLEIHHGVGSKAPAAARAKPFTTKLNAIR EETRPSKQFAVPAKPWPSSNTRQTLDSRQGTAASRAKARSPSPRPRRQSNGKATDTRG GNKVVDELKPKGASSSQSGSAAAAATAKRMAGSSKMRVIPSRYSLTPGASLGSSGAQE RRRKQSLPGSSGDANQNEEIRAKVIEPSNDPLSPQTISKVAEMLPKIRTMPPPDESPR DSGCAKRVAELVGKRSFFTAAAEDGRALDVEAPEAVAEA</aaseq>

Gene Sequence

<dnaseqindica>297..1592#atcatcctccccttcccacaaatttcaaaagttctcaccacctaatccgatccaagctccgcgctaatcgcgcaaaggggaaggaatccgctcgaatcaaccgaccgattgatcaatcgatcgattcgatccaggtgcgtgctcgtcgatttgctctcgctgacgattcggttcgattttgtttgtttgtttgtttgtttgttcgtcgattgatttgcgcctggtctctgatctctgcggccaccgccgttgttgttgcaggaggaggaggcgaagggggttcgtcggcggaggcgatggaggaggacccgctcatcccgctggtccacgtctggaacaacgccgccttcgacgactcctcgtgttccagatcggcttggctcccccaaagccccgccgtcgcggccgtccgcaagggcgacaaggagaatcaccgccccgaggttgttgatgtcgccgccggctacgacgtcgaggccgagatcggccacatcgaggcggagatcctgcgcctctcgtcccggctccaccatctccgcgtctccaagcagccggagcccaaccgcgacgacgctccgatgggggagatggtcgcgaaggtgaggccccggccgaggggcctcagcctcgggcccctggatgtgatctccatcgtcaatcgtgagaagcatccgctgcgcaccaagaagcctccggcgacgcggggcagggggctcagcctcgggcccatggagatcgccgcggcgaaccctagggtgcccgcggcggcgcagcatcagcaacagcaacgcgctggcacggcgcggatcctgaagccaatcaaggagcctccggtgcagcgtcgcaggggcgtcagcctcgggccgttggagatccaccacggcgtcggcagcaaggcaccagcggcggcgcgagccaagccgttcaccaccaagctcaacgccattcgagaagaaacccgaccctccaagcaattcgccgtccccgccaagccatggccgtcgagcaatacaaggcagacactggactcgaggcaaggaacagcagcaagtcgagcgaaggcgaggagcccgagccccaggcccaggaggcaatccaatggcaaggctactgacacaaggggaggcaacaaggtggtggatgagctcaagcccaaaggtgcgtcgtcaagtcagagcggcagcgccgccgccgccgccactgccaagaggatggcggggagctccaagatgagggtcatcccgagccgctacagcctcactcctggcgcttcccttggaagcagtggagcacaggagaggcgacgcaagcagtctctcccaggatcatcaggggatgcgaaccagaatgaggaaatcagagcgaaggtcatcgagccttccaatgatccactctctcctcaaacgatatccaaggttgctgaaatgctcccaaagatcaggaccatgccgcctcctgacgagagccctcgcgattccggatgcgccaagcgggttgccgaattggtcgggaagcgctcgttcttcacggctgcagccgaggacgggcgggcgctcgacgtcgaagcacccgaggcggtcgcagaagcttgagatgaaccaccatggtttgatccgttccttccatcagctcagctccgtcttcttcttgagtgttcaaggtgcctgcttatcttgagctagcattcgagtgaggcttttctttttgcaggggcgtgttgcataaatggtccggctactgttacattcatatctcatggtctggttcctctttctttcttttttttttgtttcttttgtcaaggccttcctatgctagtcaatgtgtgaaaagagatagtagtagtgatgagtccattctatggtttcttgttttggaattgtaagtgtgctctttggtttgagacttcgagtaagtacaggattcatggtgtggttaagtcaataagtggcttactgatttccctacattttgtctttagctgcttccttgtgtgttgggacagcaagaaacaactatccagtgacaaactgacacctctattttttcctc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0683900, RefSeq:Os06g0683900