Os01g0958800

From RiceWiki
Revision as of 19:06, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0958800

Description

Conserved hypothetical protein

Version

NM_001051991.1 GI:115442352 GeneID:4325392

Length

2047 bp

Definition

Oryza sativa Japonica Group Os01g0958800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44059869..44061915

Sequence Coding Region

44060007..44060138,44060237..44060341,44060486..44060536,44060637..44060784,44061141..44061223
,44061306..44061365,44061888..44061914

Expression

GEO Profiles:Os01g0958800

Genome Context

<gbrowseImage1> name=NC_008394:44059869..44061915 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44059869..44061915 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>caacattcggaacaatcattagttctggttggtcattcaattggtgcctacatatgcctggaaatcttcaaaagacttcagaagaaggtgaaactttgtgtaggactctatccatttttaacactcaacaagaagtccatgaagcaatcagctattggatatattgcaaggtcatctctcctaagtaaaggggttagctcatttgtttcttttatcggatcactccaagcttcagtaactaggggcatcatgagaaggttacttggaccttcatggtctgtaacggctgtcgaagctacatgcggccatctcttatggtaccatacgatgcgtaatgttctcttcatggcaatgacagagttcacgaagctctctgaagaaccggactggaatttcatcagtgcaaaacaggaccagattgcatttctgtttgatgtggacgatcactggggtccgcttgcacacttggaagagatctcaaagcgtgctcctggggttgccttgtctgtcgaaactgaaggccatacacacggctattgctgcacggaagctggatcgttttgggctgcagactacgtggctaatttgattaaaactaaattctga</cdnaseq>

Protein Sequence

<aaseq>QHSEQSLVLVGHSIGAYICLEIFKRLQKKVKLCVGLYPFLTLNK KSMKQSAIGYIARSSLLSKGVSSFVSFIGSLQASVTRGIMRRLLGPSWSVTAVEATCG HLLWYHTMRNVLFMAMTEFTKLSEEPDWNFISAKQDQIAFLFDVDDHWGPLAHLEEIS KRAPGVALSVETEGHTHGYCCTEAGSFWAADYVANLIKTKF</aaseq>

Gene Sequence

<dnaseqindica>1778..1909#1575..1679#1380..1430#1132..1279#693..775#551..610#2..28#tcaacattcggaacaatcattagttctggtatgccttgccttcactaccacaagccttctttggttaaagttatgtttttatttgggtgctgtctggatattcaagtacttttagtatataccattatacatatctacatacgatttaaagtttaaatattgtgattctaattgacctttagaaaaggacaagcctctggttcaaatatcttcagaatatgacgagatttgtgaaatccaaaagttttctgtagtacaaaattttatcgttattccactacttgattgcctagtccaagttcattagtctaggatcgattttttttttatgaattttgctttcacatgcacaattcatcttggttcttttgtgtattttgacatcacatcattatatctccattcatcactgtaatgagaaaatattgctctgagatcacgatagtattgttatctgtccaagtatgtgtgctcaatacttgaaaaccgtgtccaaattatttttctgtatgaagccattcaccttgattatttcatcttactaatgaaggttggtcattcaattggtgcctacatatgcctggaaatcttcaaaagacttcagaagaaggtatggatacctgtccaagtcggacaattctttaccgcaatgtgttattgcttcactttctgtgttcgtttctcctggacaggtgaaactttgtgtaggactctatccatttttaacactcaacaagaagtccatgaagcaatcagctattggatatattgcaaggtactgaaatgctctggatagtgatgaagttgtttacaattgtcaatatagtcatatcctgataggctaaatatagtcagaaaatcaagtggtgcgacatatgggaaggccaaacttaaagtttgcctgcattttcattatttattgacaaatgcaacatatgagaccatacattataagttgctaaacaaagtctttcaataggtattcaattagtgttgttcatcttttgagtgttgttttggacttttggtggttaacttttggcatgagttcccaagggcaaagattatattatctagtccccagttgactttcattttgcttacatgggttttctcaactgggcatggcaggtcatctctcctaagtaaaggggttagctcatttgtttcttttatcggatcactccaagcttcagtaactaggggcatcatgagaaggttacttggaccttcatggtctgtaacggctgtcgaagctacatgcggccatctcttatgggtgagttctgagcttcaccatcccactaagagagatgtcttatatgtttctactatctgaaaatgtctgagacattactcctttatggcaaattgtgcagtaccatacgatgcgtaatgttctcttcatggcaatgacagagttcacgaaggtggttttttttcccccacaatgttggcattactatttaaaagcacaagagtatactcagtagagtagacaactttacaactaacatggagccattctccgttttacctgtctagcttttcttaactattttaatgcattccagctctctgaagaaccggactggaatttcatcagtgcaaaacaggaccagattgcatttctgtttgatgtggacgatcactggggtccgcttgcacacttggaagaggtgaacagatcatttgctattccaaaactgctcttattattgtacttacgatcctgaccatcttgcttatgttaacttgtcgctccgagaattgacagatctcaaagcgtgctcctggggttgccttgtctgtcgaaactgaaggccatacacacggctattgctgcacggaagctggatcgttttgggctgcagactacgtggctaatttgattaaaactaaattctgattggaaattcaagatgaaaattgtaccgtagtcagactcagtatttttatcctccaaagggagatagtaagaataatgaaataaaccggttggatcaacctcatcaatcacaaattcacaatcgtcgtttggcctggc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0958800, RefSeq:Os01g0958800