Os06g0686500

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Revision as of 09:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0686500| Description = Peptidase M3A and M3B, thimet/oligopeptidase F domain containing protein| Version = NM_001064936.1 GI:115469603 GeneI...")
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Gene Name

Os06g0686500

Description

Peptidase M3A and M3B, thimet/oligopeptidase F domain containing protein

Version

NM_001064936.1 GI:115469603 GeneID:4341884

Length

7012 bp

Definition

Oryza sativa Japonica Group Os06g0686500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29497995..29505006

Sequence Coding Region

29498098..29498267,29498355..29498436,29498537..29498589,29498690..29498744,29498871..29499009
,29499088..29499142,29499993..29500215,29500300..29500395,29501363..29501482
,29501592..29501717,29502024..29502179,29502925..29503041,29503361..29503483
,29503568..29503635,29503774..29503909,29504020..29504185,29504270..29504508

Expression

GEO Profiles:Os06g0686500

Genome Context

<gbrowseImage1> name=NC_008399:29497995..29505006 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29497995..29505006 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatcaactgagtgcctccgcaatgctctcccgcgcagcctctctccgccgcgccgcggcggcggccttctccaccgccgcggcgaggccggagaccgggctgtacggcttcgatgtgctgcgcacggccaagggcttccgccgcttcgtcgacgacgccatcgagaggtcggacgagctcgtggcctacatcgggcagctgccgccgtccgcggagattgtccgcgccatggatgagatatcgaacactgtctgctcagttattgattcggcagagctgtgcaggaatacgcacccagataaggaatttatggatgaggcagataaggcatcaatgaggatttatgaacatcttcaatatctgaataccaatactactttgtacaatgcaatacttaaagctgagagcgaaggtgtcatgctcacagaggaagctcgaagggcagccaccaccttgcgtgttgactttgagaaagggggaattcatcttcctaaagataaactcgaacatgttaatcatctgaaccttgagattgcccagctgggtcgaaagttcagtgaaaatgttatgaacaaaccaggttttgtggatatatatccagcttcgcgcattccaagaaatatgcaacgccattttaaatccattcaccgtattaaaccttggggcgatgaggaacaaagaaatcaaatggacactacaaagcaaaagggtctaaggatagtcactgattcaggaactctatcaacagcactgagatgggtctcagatgaggaaatcaggaaacaggtatacctggtaggaaactctgaacctcgtgaaaacattacagttcttggcaagcttataaatgcacgtgacgagcttgcgaagactatgggatgcaaatcatatggtgattttgctattcgtcctaacatggctgcatctgtagatgtcgtgatgtcatttctcaaagatttgagtggcgtggttaggcataaagctggtgaggaatttaaacgtatacaggacttcaagagaaatgtatgcaatgaaaagagtgctaaacttgaaccctgggatgaggattacttcattggaatgatgaaatcagctgtacataacctggatgtctcagtggttgcagcatactttccattgtcccagtgcctaaagggcttaaacgtgctggtggaatcattatttggtgccacatttcatcaaattcctatgggggacggcgagtcatggcatccagatgtgatgaagttgtctctccatcatcctgatgagggcaatttaggatttatgtatcttgatctgtactccagaaagggtaaatatccagggtgtgctcactttgctatcagaggggggcgacgattgcaagactcaaattaccagcttccaatcgttgctctagtttgcaatttttcaagttcgagcaaaataatggcaaggcttaaccattgggatgttgaaactctgtttcatgagtttggccatgcccttcattctctactctcaagaacggagtatcaacatttctctggtactagagttgctcttgatgtggctgaaatgccatcaaacctctttgagttttatgcatgggattatcgtgtcttgaggaaatttgctgtagatgaaacaactggtgatccaataccagaaaagttggtaaaggcacttaatgcttctcggaacatgtttccagcaacggagctgcagcgtcagattttctattctataatggacttgactttgtttggggagcaaggatccaagccaatggacacaatttctactgtagctgatttgaggagaaagcatacaagttggaaatgtgtagaaggcacacactggcatactagatttactcatctgataaattatggcgctggctactatagttatctttatgctagatgttttgccacaactatatggcaagaagtatgccaaggtgatccattatcccgcagcacgggtagtgcacttagggacaaatttttgaagcatggtggagctaaggatccttctgccctgttaaaggatttcgtaggtgattccattattataaactctggaggaggaataatccctgacattagctccttgtgtaaagaagtcggtttgtga</cdnaseq>

Protein Sequence

<aaseq>MNQLSASAMLSRAASLRRAAAAAFSTAAARPETGLYGFDVLRTA KGFRRFVDDAIERSDELVAYIGQLPPSAEIVRAMDEISNTVCSVIDSAELCRNTHPDK EFMDEADKASMRIYEHLQYLNTNTTLYNAILKAESEGVMLTEEARRAATTLRVDFEKG GIHLPKDKLEHVNHLNLEIAQLGRKFSENVMNKPGFVDIYPASRIPRNMQRHFKSIHR IKPWGDEEQRNQMDTTKQKGLRIVTDSGTLSTALRWVSDEEIRKQVYLVGNSEPRENI TVLGKLINARDELAKTMGCKSYGDFAIRPNMAASVDVVMSFLKDLSGVVRHKAGEEFK RIQDFKRNVCNEKSAKLEPWDEDYFIGMMKSAVHNLDVSVVAAYFPLSQCLKGLNVLV ESLFGATFHQIPMGDGESWHPDVMKLSLHHPDEGNLGFMYLDLYSRKGKYPGCAHFAI RGGRRLQDSNYQLPIVALVCNFSSSSKIMARLNHWDVETLFHEFGHALHSLLSRTEYQ HFSGTRVALDVAEMPSNLFEFYAWDYRVLRKFAVDETTGDPIPEKLVKALNASRNMFP ATELQRQIFYSIMDLTLFGEQGSKPMDTISTVADLRRKHTSWKCVEGTHWHTRFTHLI NYGAGYYSYLYARCFATTIWQEVCQGDPLSRSTGSALRDKFLKHGGAKDPSALLKDFV GDSIIINSGGGIIPDISSLCKEVGL</aaseq>

Gene Sequence

<dnaseqindica>104..273#361..442#543..595#696..750#877..1015#1094..1148#1999..2221#2306..2401#3369..3488#3598..3723#4030..4185#4931..5047#5367..5489#5574..5641#5780..5915#6026..6191#6276..6514#actttcactaaaccccatccccttcctctcgcccatgctcctccggtgagcagcggcggcggcgacggcgaggtctagactctggagacgtgtggctgtcgaaatgaatcaactgagtgcctccgcaatgctctcccgcgcagcctctctccgccgcgccgcggcggcggccttctccaccgccgcggcgaggccggagaccgggctgtacggcttcgatgtgctgcgcacggccaagggcttccgccgcttcgtcgacgacgccatcgagaggtaaggggtggagatactgaaccgcaacctactcatctggaagctggagccatccattggctgctgagattttactgaaacgcgcaggtcggacgagctcgtggcctacatcgggcagctgccgccgtccgcggagattgtccgcgccatggatgagatatcgaacactgtagcctacttcctcttctgctaatgatttttttgcggaattagtacttgagttggtattgagggagtgatgtgcgttttatacttgatgatttggttaggtctgctcagttattgattcggcagagctgtgcaggaatacgcacccagataagtgagtgtacactggttactggttgcttcttatgaaaatcatactctggagcaatgtgttttagttttgagtggccaattacatgtgtattctgtgccagggaatttatggatgaggcagataaggcatcaatgaggatttatgaacatcttcaagtaagctcgataacatggatgttgcataccgaaatagttggtttgaggaaaaaatgagggagagaacttagtgaaatgaccaagtcagaaccattaaatttcctttttccctgtgattctatgcagtatctgaataccaatactactttgtacaatgcaatacttaaagctgagagcgaaggtgtcatgctcacagaggaagctcgaagggcagccaccaccttgcgtgttgactttgagaaagggggaattcatcttcctaaaggttggcctactagagttatactggtgcttcttgttttccacttgagtgttgctaaaagtataatttcttccatggcagataaactcgaacatgttaatcatctgaaccttgagattgcccagctgggtcgaaagtaggtacatgaattgtataatagacagtggctgtcattgtactattttttgttgaacttttcatattagctttgcattccttgttccagttgcatgtctgccagactgcaacttactatcagcaagcgatctcattatttggtgacatttgcttgttggtaagatatatatgttcaacatatatggtgttgagttcatattaacccttgggagatgcttctgttctgaaaatatatcattatttagcttgtttgactgcatagagtctatagggatgtgtgtcaagctgtcttactgcctgctaatttgctgtatagctgttctgttacaatgcttaaaaatagcgggatcatattacctactaaataattcttagtagtcctcacatcatcatattactaatgtataaatggtttagtttatgcacagactgctagtgctaagtatgaggctaaggtgtatatcgatctgttcaatgatgcacttgttcaatttatttcccatctcttttccattatcattagaaatgcgagaaatgatattgaatctccttgcacacacacaatatgcatgtggcttataagtgtattcgtaaatggtctctcattcaaatggcattctgatcgctataaggatatctattaattttactttttttttccatttaactgcacagttccattgtggctttcctgtttctttgcctgtccagtacatttccctaccgcccctttcttttcactgaattgattctgtgaattgtaattaatgccatgcctgttgatttgaggttctaaaatgtataaatttgcttgttgctagtgaacttactcattttttctgtgccaggttcagtgaaaatgttatgaacaaaccaggttttgtggatatatatccagcttcgcgcattccaagaaatatgcaacgccattttaaatccattcaccgtattaaaccttggggcgatgaggaacaaagaaatcaaatggacactacaaagcaaaagggtctaaggatagtcactgattcaggaactctatcaacagcactgagatgggtctcagatgaggaagtatgttccctttattccactcaccaaccattaattatcaatgtattatatgttatcaacctaacatttccaaactttccaaagatcaggaaacaggtatacctggtaggaaactctgaacctcgtgaaaacattacagttcttggcaagcttataaatgcacgtgacgagcttgcgaaggtaatttttttcatgttattgtagggcatttatttgaaggaaatagatgctataatgccattgtttttaaatttgatttgtttatgatttactacactccatggtgtactgtcaactagatatggtctgtaatacagagaagatgagggttaagctatggttaggtttactaaaatagcatgtttaacatgcattcttgtatgcatcaatacctgataaattgcttgaaggatatggtcatgtggtatcttgactcaaaaggtttcaaccatgtaattgaggagataaatttgagttggcattatgtggaaaatattcccagccaatggaagaccagtttgttgatttagttgagaagttattggatgcagtttatttgtgttataccaatgtgcttgatcttgactattgcagaatcaaaccttcctttccaaaggccttggatgacctatataggcctcattgcgtctatcctttagcaaaatatctaagctagatgtgacatgttaaactttcttatctcacatcattggatccagtgagagttatcagtggcctgccctcttcctttgcagtaaaatgtgctgcagcctgcagtatacatttttgtaaatgattttgcttggatcttacctgttgggaccaattagacccaaaattttgttggtatttgtgctttggatatatagtgcaagttgtatttcttaatctaattgagttgttatttggatcacatgttataagttgataaaaaaaatccaatatttgttgtgcttcctctttcccaaactttgtaattggaagaaccaaattaaaaattacctaattgagtttctaagttcgtttaggaaataccatggtatttatcacattagtaacttacgggcaaatgactgaatatttttcagtatctactgctattccaggacaagctagactgttttcttattcttgtccttttttccagactatgggatgcaaatcatatggtgattttgctattcgtcctaacatggctgcatctgtagatgtcgtgatgtcatttctcaaagatttgagtggcgtggttaggcataaagctggtgaggtatgcaagggagtgaacttcatcagtgctagggtagtttgacattaatgcattgatatattatatcctaccagtgtctctctctctgttgatagttacctctttgcaggaatttaaacgtatacaggacttcaagagaaatgtatgcaatgaaaagagtgctaaacttgaaccctgggatgaggattacttcattggaatgatgaaatcagctgtacataacctggatgtctcagtatgtgctaatttttgtggggatgcacttcaaaatatagtagaactactttataaattataacatgttatttagatcacaatctagatctttatgtaaattcaacaccataggttgacacaagccaaatacaaccgaaattggtgcttgtggactaaatcggttatgaggggaagaaaaaacacagtacccaattactttctaatttaatatatgtcaatgaaaaagttaatgtgcggtgatccctttaacatcattgcatacttaaaattttgcccttttgggcatttttgaaatacctaacaggtggttgcagcatactttccattgtcccagtgcctaaagggcttaaacgtgctggtggaatcattatttggtgccacatttcatcaaattcctatgggggacggcgagtcatggcatccagatgtgatgaagttgtctctccatcatcctgatgaggtactattgtgttaagcttagtttattagttctatataaaaaaatagtaaactactgcatcttacccaatctaactctacaaaagcatgtaactacatgcttgaacttttgttattacggatacatttctaatacgctaacattagggggcatgacaatcactatgtttcctttctcgaaatgagcatgccagattatcaatcacactactttgtttttgttactaaaatcaaaatcagcaaacaccagaaataacttttgaatgatagccaagtagacaaagaacaaaattggcattccatggttactgattagtaatacataataatgatggagagttggccttgtccgattggtcatgtactcgtatcctattagcgcatagtgtaaataccgtaaacttgaacaactagaagtatgatgacaggaatctgttacgaaattatttatcaccaatgccatttaactatgtaagatatcataaaatgttatgctattcagagcaaaaaaaatatttcaaaactagtagacccaaaggtattttcttaataaaatgtatatttggattacaattatcagtccatctctttataacgcatatatgaccaattgaattcttctaaggggtagtctaatcaaggatcttggttgctactactatcacgcacccactgttgagagcatcttcttaatttatattttactggcagcaaagtaaccaaaggaaaacatgtttaatgagcagggcaatttaggatttatgtatcttgatctgtactccagaaagggtaaatatccagggtgtgctcactttgctatcagaggggggcgacgattgcaagactcaaattaccagcttccagtatgttctcttgtatatttttatttcatgaataacaagggaattggcatttccaaacattaatgttgaactactttttaggattgttttgtatttccgtagtactttggatgttttaaaaaatgtggaatgcagaattttgcagcctttttagcccaaatatttggaactaaacaaggcctaaggcttgtgtgccttatttagatttattctctttgttcaacatagatgaagaacttttgacagcatttaaatgatccttacaaggataatatctaagattcacgccaccaattcacttcattctgatgcttttcagatcgttgctctagtttgcaatttttcaagttcgagcaaaataatggcaaggcttaaccattgggatgttgaaactctgtttcatgagtttggccatgcccttcattctctactctcaagaacggtattttgctgtccttttttataatatttaggtctctccaatgactccaggattgcttatctgccagcataatgatatttgcaggagtatcaacatttctctggtactagagttgctcttgatgtggctgaaatgccatcaaacctctttgagtacgtatgacttgttgctaaaaataaaactttatccattaacactcccgcagggtatctaattctggcttatctaaaatacagcagcatttgttatttaccttctttatcagtagttgagttcaattcacattgcaggttttatgcatgggattatcgtgtcttgaggaaatttgctgtagatgaaacaactggtgatccaataccagaaaagttggtaaaggcacttaatgcttctcggaacatgtttccagcaacggagctgcagcgtcaggtttgtttttctttgtacttcttatttctcacccttaacaattggatttgaccttgtatgtcccaatgtgctgtttcttcactttgtgttattgtgcctccgttccccagattttctattctataatggacttgactttgtttggggagcaaggatccaagccaatggacacaatttctactgtagctgatttgaggagaaagcatacaagttggaaatgtgtagaaggcacacactggcatactagatttactcatctgataaattatggcgctggtaagctttctatagttcaagaaaatttcaagcttcagttttcataaagtataactgctattctttatttcaacattattgcaggctactatagttatctttatgctagatgttttgccacaactatatggcaagaagtatgccaaggtgatccattatcccgcagcacgggtagtgcacttagggacaaatttttgaagcatggtggagctaaggatccttctgccctgttaaaggatttcgtaggtgattccattattataaactctggaggaggaataatccctgacattagctccttgtgtaaagaagtcggtttgtgaaataccattgggagtggagattgggatcattatttttgacattgagatgggttaaagggtcaaagactcatgatatcatgagtcaggagcttgatctgccacagggctgcaggatctagttgaaggtcaagctgaaaaaaataatagtagattcttgacaaagaactgatgaattggttctcaatacaggattgcaggttagattagttgggtggatcctgtttgaccattgctgaatcttcgattttaacttgctgctgctgctgctgcaagggtggtttagttccctgtcagatgatttttcgcatttactccgattgttcggaactgttgttccaaagctacaaagtggctgtgcctgtaatattgacccaggttaatcttcatagcccatcacatgtaatagttctctaaagtgattataagagtgagagatgtgcccatatgatcttttttgcattcttagttggtctcatggatagaaagcatgtttgagga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0686500, RefSeq:Os06g0686500