Os06g0687200

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Revision as of 09:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0687200| Description = Zinc finger, RING-type domain containing protein| Version = NM_001064940.1 GI:115469611 GeneID:4341889| Length = 133...")
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Gene Name

Os06g0687200

Description

Zinc finger, RING-type domain containing protein

Version

NM_001064940.1 GI:115469611 GeneID:4341889

Length

1331 bp

Definition

Oryza sativa Japonica Group Os06g0687200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29529795..29531125

Sequence Coding Region

29529886..29531013

Expression

GEO Profiles:Os06g0687200

Genome Context

<gbrowseImage1> name=NC_008399:29529795..29531125 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29529795..29531125 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaacgcctgcgaggccggcctgccgctgtcggtggccgtgtcggtgccgccggtgatggttgacggggagacggttccgaaggaggtggaggagtgcgaggacgaggaggaggaggaggagtacgccggggatgcgccgccgccgtggaaggtgatgggttcggatgatgagggcgagacggaggccggcgaggaggaggagattgccgaggccgacggcgaggaagaggcggcggacgtggaggaggtcgagtacgagttctacgacagcgacggcagcgaggacgagggcgacggcgaggaggttgacccggcggtggcgagcgccgcgcagttcgtgccggaagggcagtttcttgggtcggcgcagttcgccgcctacggctgcgccgccggcttcatgcgggtcgccgccgtcgaggcggacccggccgacggccaagagatcctcgtgctctaccgctacaccctcctcaagagggcatggagcgatccggcgggcgtggagctgtccatgtgggcgaaggtgtcgaagatacaccgcctccggttcatcgtcccggcctccggcgacccggcgagctcgctgccattcgccgggctatctctgtccccgctgatctaccacaacgactacgtcgaggagctcgagacgctgtggtccaagctggcggcgcaggtgcgcgtcccgccggtagccacgcgcgtccaggtgatcgtcgacgtgggcatcctcagggcgggggacaacacgccggagcgcagggagtacatgcgcgccgagctggaggccaagaaggagatgccatggccggggaagctcctcggcatggagctgcacgtgccggagccggtggtggcggcggcggcgtcgtgcaagagggacagcagcgaggaggtgttcgacgacgcgccagcgccgccggcgaagcggaggaaggtgttcgacgccggggaggagtgccccgtctgcctggacgagctcgaggacggcgtcgtggcgtggcctgggtgctctgtcgcccatgtcttccatggccaatgcttggagacaactctcaaggggagccagatgtgccctatctgcaggcgtgatcttggcctgaaaaccttgcaggagtag</cdnaseq>

Protein Sequence

<aaseq>MENACEAGLPLSVAVSVPPVMVDGETVPKEVEECEDEEEEEEYA GDAPPPWKVMGSDDEGETEAGEEEEIAEADGEEEAADVEEVEYEFYDSDGSEDEGDGE EVDPAVASAAQFVPEGQFLGSAQFAAYGCAAGFMRVAAVEADPADGQEILVLYRYTLL KRAWSDPAGVELSMWAKVSKIHRLRFIVPASGDPASSLPFAGLSLSPLIYHNDYVEEL ETLWSKLAAQVRVPPVATRVQVIVDVGILRAGDNTPERREYMRAELEAKKEMPWPGKL LGMELHVPEPVVAAAASCKRDSSEEVFDDAPAPPAKRRKVFDAGEECPVCLDELEDGV VAWPGCSVAHVFHGQCLETTLKGSQMCPICRRDLGLKTLQE</aaseq>

Gene Sequence

<dnaseqindica>92..1219#aacctatttccctttcccgccgctgctctcaccgcgaaccctacgcgccgccgccgccgccgccgcggctgcgcacgtcgagcagcccgcgatggagaacgcctgcgaggccggcctgccgctgtcggtggccgtgtcggtgccgccggtgatggttgacggggagacggttccgaaggaggtggaggagtgcgaggacgaggaggaggaggaggagtacgccggggatgcgccgccgccgtggaaggtgatgggttcggatgatgagggcgagacggaggccggcgaggaggaggagattgccgaggccgacggcgaggaagaggcggcggacgtggaggaggtcgagtacgagttctacgacagcgacggcagcgaggacgagggcgacggcgaggaggttgacccggcggtggcgagcgccgcgcagttcgtgccggaagggcagtttcttgggtcggcgcagttcgccgcctacggctgcgccgccggcttcatgcgggtcgccgccgtcgaggcggacccggccgacggccaagagatcctcgtgctctaccgctacaccctcctcaagagggcatggagcgatccggcgggcgtggagctgtccatgtgggcgaaggtgtcgaagatacaccgcctccggttcatcgtcccggcctccggcgacccggcgagctcgctgccattcgccgggctatctctgtccccgctgatctaccacaacgactacgtcgaggagctcgagacgctgtggtccaagctggcggcgcaggtgcgcgtcccgccggtagccacgcgcgtccaggtgatcgtcgacgtgggcatcctcagggcgggggacaacacgccggagcgcagggagtacatgcgcgccgagctggaggccaagaaggagatgccatggccggggaagctcctcggcatggagctgcacgtgccggagccggtggtggcggcggcggcgtcgtgcaagagggacagcagcgaggaggtgttcgacgacgcgccagcgccgccggcgaagcggaggaaggtgttcgacgccggggaggagtgccccgtctgcctggacgagctcgaggacggcgtcgtggcgtggcctgggtgctctgtcgcccatgtcttccatggccaatgcttggagacaactctcaaggggagccagatgtgccctatctgcaggcgtgatcttggcctgaaaaccttgcaggagtagactgatgttgcagacttgcatttgaaacagaatgaatgaatgaattgtaggttgtagtagcagattgattgttctgcagttgtagccttcaattcgatcgatttcttgtgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0687200, RefSeq:Os06g0687200