Os06g0687500

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Gene Name

Os06g0687500

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001064942.1 GI:115469615 GeneID:4341891

Length

4599 bp

Definition

Oryza sativa Japonica Group Os06g0687500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29547226..29551824

Sequence Coding Region

29547340..29547663,29547804..29547866,29548032..29548116,29548216..29548278,29548845..29548878
,29550208..29550298

Expression

GEO Profiles:Os06g0687500

Genome Context

<gbrowseImage1> name=NC_008399:29547226..29551824 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29547226..29551824 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcgtcctactacaacaacccgccgccgccgcactcctcgtacgcggccccgcctccgccgccgccgccgccgccgggcacctccctgtacgcctcctaccgccaccacgcctaccctcctcacccgccgccgccgcccgcgtacgtcggcgcgtactacgaccacgcggcggagccactgccgccgcgcgacgagctccgcacgctcttcatcgcgggcctccccggcgacgccaaggcccgcgaggtctacaacctcttccgcgacttccccggctatgtctcctcccacctccgcacctccggcaaatcctcgcaggcatatgcgttcgctgtctttgcagatcaaccttctgccttagctgcaatgagtgccacaaacggaaggatatttgaccttgagaataattgcacactgcatgtagatcttgcgaaatctaattcaagatcaaagcgctccagaacagatgatgttccgtcttattcctctgagaaaaaagctagaaatccgaggggatttcctgattcagttacacgaactttgagcctgctgctttcagcaaggacccatcagcatttgcccctcaaaacaatcctccttgccctacactctttgttgctaaccttggtccaacttgctctgagcaagagctaa</cdnaseq>

Protein Sequence

<aaseq>MAASYYNNPPPPHSSYAAPPPPPPPPPGTSLYASYRHHAYPPHP PPPPAYVGAYYDHAAEPLPPRDELRTLFIAGLPGDAKAREVYNLFRDFPGYVSSHLRT SGKSSQAYAFAVFADQPSALAAMSATNGRIFDLENNCTLHVDLAKSNSRSKRSRTDDV PSYSSEKKARNPRGFPDSVTRTLSLLLSARTHQHLPLKTILLALHSLLLTLVQLALSK S</aaseq>

Gene Sequence

<dnaseqindica>115..438#579..641#807..891#991..1053#1620..1653#2983..3073#aatcctccaaaccgcgtccgcgtccccatcacccccgcgtcaccgcctcctcctcctccgccgccgtcgccctcgcgctcgcgctctcctctcctcgccgcctcgccgcctcgcatggccgcgtcctactacaacaacccgccgccgccgcactcctcgtacgcggccccgcctccgccgccgccgccgccgccgggcacctccctgtacgcctcctaccgccaccacgcctaccctcctcacccgccgccgccgcccgcgtacgtcggcgcgtactacgaccacgcggcggagccactgccgccgcgcgacgagctccgcacgctcttcatcgcgggcctccccggcgacgccaaggcccgcgaggtctacaacctcttccgcgacttccccggctatgtctcctcccacctccgcacctccggcaaatcctcgcaggtttccccactcttctctcctcaccccccaacccttcaatctcccctgtgctagggtaattgggtttgcaaacttgtacgtattccttctctcgaacagtatggtgagtagcacaaaccctgactgtttctgcgttgcaggcatatgcgttcgctgtctttgcagatcaaccttctgccttagctgcaatgagtgccacaaacgtaagagctcgcttcagcattatcaggtttctagtagtattaggttatgcttttctgacaaaccattactcctaacgaggttatctacatcagaagttacagctataaataatctgtttagagttctcaatggttgccatttctgtggattgtttcttgctgcagggaaggatatttgaccttgagaataattgcacactgcatgtagatcttgcgaaatctaattcaagatcaaagcgctccagaacaggtgggcgattagcctgcaccttgcaatctttgttcctactgccacatattgtggttattgtgtatcagtattgttgattgcacccttttacttcaacagatgatgttccgtcttattcctctgagaaaaaagctagaaatccgaggggatttcctgattcaggtatcattcaagttgacaggagctagtacctgcaatttttttgaacagttcgttgtatacaccatgttgatctatccactaggacctgttccatcgtagtcacatgagcaatagcagaccattccaaatccacagtttccacatccatcagattgatgaaaatggtttccctctctactaagggatacagttgatcctgagttcctataactttttcctagaattttctgtgttcatatcctaaccatgacttcatatccactcacgttgatgaacattcttgcaaaacactcaccttgcacatctttggcacactttgcgccctatcaggtgctggaagcaatattcacatgtctggaatgggtaattcttcacacagcttgaatggttatccttctgcacaaaggttatggcgcactacttgagcacagtttaattatgtgttttttaggaaaatcagcttaagatgtccagcagctggtgttagaaaagagatatccaatactattgctgatattactcctagaaatattttaattctaatcaagatcattttcaacttgcagttacacgaactttgagcctgctgctttcagcaaggtgagttttgtttgtgcatcttgatatatttgtccttgtctagcatcagtgttggtttatttctatacaaatatgttgtttgataaatgtttgcagtatctgagatggaaaattggaaactacgaacaattgcagcaaagcttaatattattaccatcttatgacatatatcacatttgcaaagctgtttgaatggttttagttaattccatttgtatatggaaaaaagagggctagcacatttataatattattgtaccacaagtcagttctgctttcagagttttactactagtacattatcttcaaggtagaattctattaatcttgtatagtaggtaaatctattaacttagtcacaacaatggtagtttaactagtattataaagtgcgattgagttacaaaagactaaagcgaatgacttcaatggcgtaactggtactgcaaagtatagccacagggattgggggctgccctcatgatccatgaccttgatgaggcatctcaaatcatgggtcactaccagggcacacctgcttccactctccatgagagcacctgatggttggccactggatctttgtgcgtgtgggttgttgcccttggagagactgctgcctattgctggtggttggccattaatttgttgcttgttgccagtcccaccattgccaccattgcagctcatctgcttgacgatgaggagcagcagcagacgcatgagatggttatggagaggggagcatgagaggaggttgaggagatgactaggtgtgtgcagctgtggaggaaggggaggcagtggaggctactttgtgaattgtggacgcatgttgacttgtaagttggagttgcggggctagaagatagtgtgctatgtgagatgttgggttcaagtgggatattgggctgaaccaggtcatctatcttctcatctcctttctctctgatttatgtgtgctttatgtggctgggctgtaatattctgagggatcgccttcccttcttctttcattcttattttacaaacttggtttggttgcatatagcaactaattgtgcaattgaataaatggctcggattcattgggatcattatgaacaaggcattcgatcttgactcatggagtgagccatattatacagctgatcttattggatggaaaactaaatgaagtaacccatggttttactttacataaataaaaagatcagaaaacagcacaattgatttctgttgttgctaaatatcaaatatctatattttgttaggcttattggagagtatgtaatgcttactcccttttgcatgtccatttacctgcaggacccatcagcatttgcccctcaaaacaatcctccttgccctacactctttgttgctaaccttggtccaacttgctctgagcaagagctaatagatgttttctcaaggtatttccaatataacaattcatgatgtgagataaataaataaacatattttttttacaagtttcttctcatggttagttgcgcgggattcataaaggtgaagatgcaaaacaagtttggagctccagttgcatttgtggatttcaaggtatatcaagtaaactattctgctgcttattattaattgtctaggtctctagctattatgttggtctattgtggagagctatctgccttttgaaatctgtggtaaatcttcagataatggatgcccatttcacttttcgttaaaaaggaaaacatcgggtagaagtcaaaacaaagtaaacaagaaaataaacgctcttgatttcatcagtggtgagataacatgaaactatgatgatacacttacagagacagacagtctgtaaagttgattcttttctgtaggttaaatctagtttatattcttttgtttcatgtgtttcagatatcaaaaaaatgatttcttgataaattttactagttaaccctaatatttgtggtgtgaccacgggaatctgttgcgaacattattaacaaagtcatatctgtattttttttctatgtaagtgttttttgtatccataaattctatagaccagacaaccaactgctgcatacacaggcatcagtaaagatagtcgaattaggggttcttgtttgttgccacatttaacatgcaatggagatatgtgttttgaaagatactattgtttctgtacttgcattttcctatagagtggatccttaagcattttcattaccgatgatttcaatatgtttgaatttattttcaaagttaatcccaaactggagttgctgcctgcaggatatggacagttcaactgaagccataaaccgtctccaaggagttattttgtattcatcaactggcgaggggatgcgtttagagtatcctacatttagggattatttaaatttcctgctattatatctctcttcaaattcttcttgcagggtgtatttggagcttatagcagaagctaaatgcgatctctacttcctgaccatgcctttttaacttattgatatagctccttaacatctatcagatatgccaaatctcggatgggcctgcgtaagcaggataagcgccaatagatatgatagacgaggctgcagttgtttctcatacagcgcaactggcagtggagcatgatgtttcctgactggtcttccaagtgctgtttagtctgatgacacaatgttttgttcagtgaaatgttttgctcatgatgttaggttatggtgcatcggtggtctttcagttccataacattttgtaattgggtttggtaacttaagctgtacctgtgtagttgtcttaccttctggttcttttcaaccctatactttctaggctgttcattagctactgttgaagtcagcatacccatgtaatcatgttcaaacttcaaacaatcaaactagttgtaacttttgaaagatcaaatggttcggtgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0687500, RefSeq:Os06g0687500