Os06g0691000

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Revision as of 09:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0691000| Description = DNA repair protein, Rev1 family protein| Version = NM_001064954.1 GI:115469639 GeneID:4341904| Length = 9364 bp| De...")
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Gene Name

Os06g0691000

Description

DNA repair protein, Rev1 family protein

Version

NM_001064954.1 GI:115469639 GeneID:4341904

Length

9364 bp

Definition

Oryza sativa Japonica Group Os06g0691000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29683783..29693146

Sequence Coding Region

29684109..29684150,29684301..29684361,29684509..29685089,29685360..29685733,29685890..29685994
,29686557..29686625,29686739..29686811,29687050..29687133,29687217..29687303
,29687386..29687445,29688190..29688282,29688506..29688625,29689459..29689662
,29689769..29689819,29689900..29689988,29690084..29690216,29690875..29691009
,29691236..29691747,29692375..29692451,29692538..29692653,29692786..29693097

Expression

GEO Profiles:Os06g0691000

Genome Context

<gbrowseImage1> name=NC_008399:29683783..29693146 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29683783..29693146 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgcctcctcctccggtggccgcggcgcgccgccgccggccaccgccgcctcgcccggccagaagcggccgaggggagacgaccccgcgtcgccttccaaccgctccgaatccgcccccgccaaaaaccctcgccgcgccttctcctcctcccccttcgccgacttcgggagctacatggccgcgaagaacagcaagctcgccgcgcagttcgaggctgacgcctccacgtccgccgcggaggttaccggcggcgtcttcgctggcgtctccatcttcgtagacggcttcaccgtgccctctagccaggagctgaaggagattatgctgaataatggtgggcggtttgtcaactacttctcgaggaatacggtgacgcacatcatctgcacccatctgccaaatagcaaaatgagtaatctgagagcattcagtaagggacttccagtggtcaagccagcctgggtggtggattcccttgcagagaacagactcctcagctgcgtcccgtatcaaataagtcagcataattcttcaagccgaaagcagacgaagctttcttctttcttttctgggagacattatcagggggaactaaatgatcaaagcaattcccatgagctacaatcttcttctgttcaggagggatcacaagaccataacagtggttgtgaaaaggaagggtcactattgaaggaggaggcatcaaaggactcactatcctctgatgatcataaagcttcaatgtttgaagaacaagatagtgaagactttgttgatgaggctggtaatgcttatgaaacagcatgttcagagaggagggataatgacatggatggtaaacttcatgttgctgagtccccagatattaggtcaaggtgttcaaatttgtgcagtacaagctctacgggcagtcatttgtcattggattcgttggatagaaatgcaactaaatcttctagtcggacacattcaaccctcacagatccaaattttgtagagaactatttcaagtattctcgactgcatttcattgggacctggagaaatcgataccgcaagcgcttctcaaatttactaggtgataaaagcagtaaggggaaccgtgatcattcagggaagaataacacgatcattcatattgatatggactgcttttttgtatcagttgtcatcagaaataagccagagctgcatgacaaaccagtagcagtttgtcattctgacaatcctaagggaactgcggaaatatcatctgcaaactatcctgcacgaaattatgggataaaggctggcatgtttgttagagaagccaaggctcggtgcccccacctaatgattgttccgtatgacttcgatgcatatggggaggttgctgaccagttctatggtattttgcataaatattgcagtaaggttcaggctttgagttgtgatgaagctttcctggatatgaccgaatgcttacatgataatccagaggaagtaacacagaaaataaggaatgagatttttggtacaacaaagtgctctgctagtgcaggtatttctggaaacatgctcatagctcgtttagctaccagatctgcaaagccaaatggacagtgttttatttcctctgagaaggttgatggatatttaaatactctttctatcaaagcactcccaggcattggtcatactgtttcagataaactaaagagcaaagaagtggaatactgcggccagcttcgcaacattccaaaggaatctctccataaggattttggtaaaaaaattggtgacatgttatggaactattgcagaggaattgatcattcagttgttgaagctgttcaggaaacaaaatctgtcggtgctgaagtcaattggggagtcagatttaatgataacaaagatgctgagaattttcttgtcaacctcagcaaggaggtttgtctacgcttggaaggttgtggagtgcagggtcgtactattacccttaagttgaaaacaagaaggaaaggtgctggagagccaatcaagtttatgggatgtggtgactgtgaaactgttagtcgatctatgacgattgcaggtgcaactgacaatccagtcacccttcagagaatcgcaaaacagttattctcatcattctgtgttgatgtgaaggaagttcggggagtaggactaaaaatttcaaggcttgagcatgcagatttggctcggggagcaccacaagggaatatgcttgaatcttggcttgcttcaccatctgacaagctcaagaaacacagcaccgagaaagcttgcttgctcaaaaatcgtgatgatgcagcaactagcgagcggagaggttttggaagtatcagaccatcaggtataggagggacttctcgttcatcagaagtgaaccctccaagtgacaggtccactcgagttggtgttgagctgccaccattgtccgaacttgatttggaggtcctaaagaaccttcctccagagataatatatgagatgaatgacatgtacaagggagaattgcatggttttctggggataaccagtggtgacaaagccaaggaaagcaatacaaaatctcttgtttttccagcagttgatcagaatcttgtgcctgttcttgacacgaagctgcatggagatggaaagcacaaagactccatacattttaaaaaggaggcagatattaaggggccttcaggtgaacaactctctgaattaaaacaagccaatgctccacgttcaatagccagtgaattggttgatataccaactaaaagtgtcatacagcatgatttcatgccaaattctttaagccaggcagacgtcacagttcttcaggaattacctgaggatgtgaaggctgatttgtttaatgcgcttccattgcacagatcaggagatcctacatgcagcacttcacatgtttctgaaaacaaatttccccaggatggaagaagcgatgatccaaaacaacatccacagatttgtcacctgccagggaattcccaaaaatggattgaagagttcagagttagccattgcctgatactgaatgttattgcagagcaacacacagactccatctccagtcgacctttatcttctgttttagaacctgtaatttcctaccttcccctgtgccctaactcaggcactgaagaatggaacgaagcatttgcaagcctttctgaacttctgacacaatatatacaccaaaaggttgaatctgatattgaagagctccacaaatgtttccggcttttaaaaagattgtcatcaggatcagagcttttcctggaattgcacgatagcattcttcctctcttacaggattctgtcaggcagcattatggtgggatactacatttatag</cdnaseq>

Protein Sequence

<aaseq>MSASSSGGRGAPPPATAASPGQKRPRGDDPASPSNRSESAPAKN PRRAFSSSPFADFGSYMAAKNSKLAAQFEADASTSAAEVTGGVFAGVSIFVDGFTVPS SQELKEIMLNNGGRFVNYFSRNTVTHIICTHLPNSKMSNLRAFSKGLPVVKPAWVVDS LAENRLLSCVPYQISQHNSSSRKQTKLSSFFSGRHYQGELNDQSNSHELQSSSVQEGS QDHNSGCEKEGSLLKEEASKDSLSSDDHKASMFEEQDSEDFVDEAGNAYETACSERRD NDMDGKLHVAESPDIRSRCSNLCSTSSTGSHLSLDSLDRNATKSSSRTHSTLTDPNFV ENYFKYSRLHFIGTWRNRYRKRFSNLLGDKSSKGNRDHSGKNNTIIHIDMDCFFVSVV IRNKPELHDKPVAVCHSDNPKGTAEISSANYPARNYGIKAGMFVREAKARCPHLMIVP YDFDAYGEVADQFYGILHKYCSKVQALSCDEAFLDMTECLHDNPEEVTQKIRNEIFGT TKCSASAGISGNMLIARLATRSAKPNGQCFISSEKVDGYLNTLSIKALPGIGHTVSDK LKSKEVEYCGQLRNIPKESLHKDFGKKIGDMLWNYCRGIDHSVVEAVQETKSVGAEVN WGVRFNDNKDAENFLVNLSKEVCLRLEGCGVQGRTITLKLKTRRKGAGEPIKFMGCGD CETVSRSMTIAGATDNPVTLQRIAKQLFSSFCVDVKEVRGVGLKISRLEHADLARGAP QGNMLESWLASPSDKLKKHSTEKACLLKNRDDAATSERRGFGSIRPSGIGGTSRSSEV NPPSDRSTRVGVELPPLSELDLEVLKNLPPEIIYEMNDMYKGELHGFLGITSGDKAKE SNTKSLVFPAVDQNLVPVLDTKLHGDGKHKDSIHFKKEADIKGPSGEQLSELKQANAP RSIASELVDIPTKSVIQHDFMPNSLSQADVTVLQELPEDVKADLFNALPLHRSGDPTC STSHVSENKFPQDGRSDDPKQHPQICHLPGNSQKWIEEFRVSHCLILNVIAEQHTDSI SSRPLSSVLEPVISYLPLCPNSGTEEWNEAFASLSELLTQYIHQKVESDIEELHKCFR LLKRLSSGSELFLELHDSILPLLQDSVRQHYGGILHL</aaseq>

Gene Sequence

<dnaseqindica>8997..9038#8786..8846#8058..8638#7414..7787#7153..7257#6522..6590#6336..6408#6014..6097#5844..5930#5702..5761#4865..4957#4522..4641#3485..3688#3328..3378#3159..3247#2931..3063#2138..2272#1400..1911#696..772#494..609#50..361#gctcccgaattccccgccccgctcatctcgcctcgcaggcccgcccgccatgagcgcctcctcctccggtggccgcggcgcgccgccgccggccaccgccgcctcgcccggccagaagcggccgaggggagacgaccccgcgtcgccttccaaccgctccgaatccgcccccgccaaaaaccctcgccgcgccttctcctcctcccccttcgccgacttcgggagctacatggccgcgaagaacagcaagctcgccgcgcagttcgaggctgacgcctccacgtccgccgcggaggttaccggcggcgtcttcgctggcgtctccatcttcgtagacggcttcaccgtgccctctagccaggtgcccccccgcgtctccgcaaacccttgtttaagcttttggcacatttcaaattctgacgaagggggatcgcttagataaactaatggagattatggaaatggtagtaattattttatgggatttggttaggagctgaaggagattatgctgaataatggtgggcggtttgtcaactacttctcgaggaatacggtgacgcacatcatctgcacccatctgccaaatagcaaaatgagtaatctgaggtatagaatgcatttgaaggaaagggaaccctagattttgtttttgtttttgtgagttttggtaatcgtgttgccatttaatacagagcattcagtaagggacttccagtggtcaagccagcctgggtggtggattcccttgcagagaacagactcctcagctgtagtttcagttcaccttcccttactaacagtttactgctggttagctgaatgatatgctttgctgttgcggttttgctcgagttcacgaacttaactaaaaccatgtcgttggcactacatttgttaataataggtctgattgagttgtaagttgtacggtattgctcgagcctgtgaacttagataaaaccatgtcttgctataaatctgttagtcataggcttgattgggttggctcacatcagtgcaatgaaaaagtacttttctgatttttttaccactattcttttggtcctattgaacaggtttggttattgacatctgcctgaaaccttttattctaagtcgtgatacttcatactacttctttggacataaatacttctcttcaaaattaaaatttattgacatgtagctgaaatgcccaatttatctgtctggagcaagcacaattaaccaaattagtcgactaaacaatttaatcatgatgtgagcttgcgctgttgctacttctatatgtatagccactttgcatgatttcttgtgatatatgtagtttgtatccactcatattaatccacttgttcttatggcatttttttttgttttcttatttttcactaaggcgtcccgtatcaaataagtcagcataattcttcaagccgaaagcagacgaagctttcttctttcttttctgggagacattatcagggggaactaaatgatcaaagcaattcccatgagctacaatcttcttctgttcaggagggatcacaagaccataacagtggttgtgaaaaggaagggtcactattgaaggaggaggcatcaaaggactcactatcctctgatgatcataaagcttcaatgtttgaagaacaagatagtgaagactttgttgatgaggctggtaatgcttatgaaacagcatgttcagagaggagggataatgacatggatggtaaacttcatgttgctgagtccccagatattaggtcaaggtgttcaaatttgtgcagtacaagctctacgggcagtcatttgtcattggattcgttggatagaaatgcaactaaatcttctagtcggacacattcaaccctcacagatccaaattttgtagagaactatttcaaggtattgtcgttcaggcttaagccttgaattttttatctactaaggaattatggccaaattttttttgggtgtttgtaaggactatggattgacaagcatgttgaatatttccactctctctgctacttttgctttattatatcatctgatatccttttcttaatgctctattacagttttttatgccgtgctgtttaatttatgatcctcttacttgataccttagtattctcgactgcatttcattgggacctggagaaatcgataccgcaagcgcttctcaaatttactaggtgataaaagcagtaaggggaaccgtgatcattcagggaagaataacacgatcattcatattgatatggtaatcttgtaatcctttttgtaacttataagctatacatataagttgtatcttttattttttaatcttatttttttcaatgacgggaaatatttgctctatcaaactttcaaaacataaatatgatgatagttctagctgtactccttatgcatattacttcatgacttttggatcttttagtctggtcgcggaaagaaaagaatgctctgaacttggctctgaccagtctgcaatttttgcagtctgatttctaagtatagtagtaagaccaacaggcatgaaaaatgatgatctagtaaaggtcacattgtcttttgggatgaaattagtaatgtaaaaactgataacaatacaatgtattgcatgaattggcaattttttatcaatctaatcatgaataagtcttcctgtcattggagcctctgtgccaaaatgcaaaatgaaatcttcccttggattagcaggctagctgcagtacagaataactgacgttaaacttaaacttcaaaacttctatttaagtaacatatctattgctcactgaagactgaaggtcaatttttgttgaagttcagttgtttatcttgatccttggcataatttttctgcaatacttgttgtcttgatctttgacataattattcttcaacctcaggactgcttttttgtatcagttgtcatcagaaataagccagagctgcatgacaaaccagtagcagtttgtcattctgacaatcctaagggaactgcggaaatatcatctgcaaactatcctgcacgaaattatggtgcatttattttatcaaaagtttgtcttggaacttcaaatctggttatacaaagcacctttgaacatgacattgctatggtttgtgtattccagggataaaggctggcatgtttgttagagaagccaaggctcggtgcccccacctaatgattgttccgtatgacttcgatgcatatggggaggtatatctgtcaattcctcctcatttttttttgtcagagcactgcttttgttaggattgatttgttgcaattttctacaggttgctgaccagttctatggtattttgcataaatattgcagtaaggttcaggtttgtgctgtattactcatgcttactcagaatgtatatatgggatgcatcgtcagccttattgccacataaggtctaaacctctaacaacattatgcaaatttaggctttgagttgtgatgaagctttcctggatatgaccgaatgcttacatgataatccagaggaagtaacacagaaaataaggaatgagatttttggtacaacaaagtgctctgctagtgcaggtatttctggaaacatgctcatagctcgtttagctaccagatctgcaaagccaaatggacagtgttttatttcctctgagaaggtatatgcatgctaattatgcccattctcaatatacagtggtttgtttgcaacaaagattttttttgtagttctagatgagttactctgtttcctacaaaattctctcatttaaaatggtcccttagtgctatggttgatgaattaattgttgaaatagcacaataactttagagtacagtgaatcctacaatagcattcttctcttaccttgaaggtataggcttttgtgtaattgaaaggggaatcacaatttcatgtaggaaagaagtttctctgctattgtttagaaatcttacctaaaactattcatggagtataacttatctgaccgaccataccataacttgggaattgggttcttgtataagttttcttttgtggaaaatatcgaatgatactttatttatagcttaggcatctcctggttagttcatatttggtggttgagttgacattactagttttcatatatagagcggtgtaattcaatacagctaaggtgcatccactccctcttttttttttttttagaaaacagatcacaccaggtgatccggcttttagtaagaaagcccacaaacaaggttctgttacaactaaacaaacaaaaaagaaggtaatttttctgtgggtaaccagaatgcgcacaacgcttacacccctcttagcagctcatgaaagtcttaaacacaacttaagccaacaacagcaaaacatcatttctaactggatttgctttcttctttatgagagttttgtgtgtcttacattagcagcctatcattcctaagggcatagaacttgtctgatagcaacatgtatttgttacaggttgatggatatttaaatactctttctatcaaagcactcccaggcattggtcatactgtttcagataaactaaagagcaaagaagtggaatactgcggccagcttcgcaacattccaaaggtttgccaacaataaaattgtgttgtttaacatactattttgcaaacaaagaatatgatgtgtattagttgctcaacttgttacaattctaatgaggtattgcttatctgccatgtaatggccatgtctttctccatatcctctgagctgtggcttttcttatatggtttctttactgatatccttcaagaaacctactaatgtgccaacacttcttatgcaggaatctctccataaggattttggtaaaaaaattggtgacatgttatggaactattgcagaggaattgatcattcagttgttgaagctgttcaggtagaagctacctagtttctgtttctatagtaaagtcatctgcatttcttttgtcaaggttccattctgattaaaacttgtaaatttcaatggacaaatagtatgtcatgccttgtgggtacaggggatatagaagtatccaaaaagaatatttatttgccttctgtatgacatcagatcaagctgatcttagttttttagctatgacttatacaattgctcattctgcaaatattcaataaagtatgcaactgttcttgaagcattccaaattctaagatgaaaaatatgtctggatatccctctggcattactttacttccgtatagacttatggagacacaaaagccttcaggggaaatggagtattctgtaaatatcaatttattttaccgcattacttctgtcctgcatatgtgaattgtttatttttgctatattataaacatggtattttcctgataagttctgtgtacccacacatatgttgcaatgcaaatgtgtcatacatccatacaacaatggatcagcaatagctcaagatagtatgcaaaaggacatgctatgaataacatgttctcctgttaacatggacaagtttttgcctcatctagggatagaagggcttgcatttattcatagttgatggttctgggctacagcatgcactgtgttggtctctgtcatttggaatggaatgaccaatctgtttgaacttcttttgcttcacatattataatacaggaaacaaaatctgtcggtgctgaagtcaattggggagtcagatttaatgataacaaagatgtgagcatattctgtttcctttgttatgaatcattgtaattctatctatcttttcctttgatcccttttgtattgtttgcaggctgagaattttcttgtcaacctcagcaaggaggtttgtctacgcttggaaggttgtggagtgcagggtcgtactattacccttaaggttatttttattgactgtacattcttctctcttttctataattgctggttaaaggttaataactgatttgttttgccgtgaagttgaaaacaagaaggaaaggtgctggagagccaatcaagtttatgggatgtggtgactgtgaaactgttagtcgatctatgacggtaagggtggaaagatgcgttcagatgcaattgttagttatttttgtctgtgttctatgttgagttgctactctgtgtaattgtcatttggacttttaatgttgaccatggaaatggttgttatttcatcacctttttcaccattttcatattttgatcacaagttgacttactttatcagtgcattgtgccttcacttaacttctgatttttctttctatccttcgatattttgaagattgcaggtgcaactgacaatccagtcacccttcagagaatcgcaaaacagttattctcatcattctgtgttggtaagttgtagggctttatttgattaagaaatcctgcaacaaaagtctctttgagcctgtgttccattgtcattactttgttgaagactaagttgtacaatgtcatatggtagatgtgaaggaagttcggggagtaggactaaaaatttcaaggcttgagcatgcagatttggctcggggaggtatattgtaactattcgatttctcttcattctgttttcttaataatgttgaaccaatcctttttgttcagtgtaaatactctttgcacatcagtagtgatgtacaaaatgcagttgttgctatttatgcattttaatctgtttataagctatgcatattaaaataagtccaaacattggaagcaaatgcaggcttcctattaattaattataggttccagtagacagtggcaaggcgagtgctttctatagagtaatgccatattgttgtactgggatttaagaaaatgcagccaggagttcaataggaaatcatgagtgtgtcaatatggtgtatcaagctaacattaataaggccaaagctgaagataaatacaccatttgctgcaatataaaattttgttgtacaacagcaaaagcctgaagcatattggccttagtgcttatcaagcaacttatgatttgggaaattgattttgcacagatttgtcagtagctgatatgactcatctgattttctggacactgagctccttataattgttattcttttttcatgaagcaccacaagggaatatgcttgaatcttggcttgcttcaccatctgacaagctcaagaaacacagcaccgagaaagcttgcttgctcaaaaatcgtgatgatgcaggtattgggcgtctgttgcttgtcataccaagctgtagtttttgttgtaaaaagtgcactttctttaatgttgtttcacattatccatgttgaatttgcaacttttagttccgttgatttttattattaagatttggactgtttggaacttatgtagcaactagcgagcggagaggttttggaagtatcagaccatcaggtataggagggacttctcgttcatcagaagtgaaccctccaagtgacaggtccactcgagttggtgttgagctgccaccattgtccgaacttgatttggaggtcctaaagaaccttcctccagagataatatatgagatgaatgacatgtacaagggagaattgcatggttttctggggataaccagtggtgacaaagccaaggaaagcaatacaaaatctcttgtttttccagcagttgatcagaatcttgtgcctgttcttgacacgaagctgcatggagatggaaagcacaaagactccatacattttaaaaaggaggcagatattaaggtaagatgatcattacatttggagatgcacctgatagtgcagtggcaaggggtgtgtggtttcaaccccgaggtcccgtgttcaatcctcaacatgctcacaatttcttcttaaaaaatgtttggagggatgtctctccctccaaatctctttttttttttatcagtagaattgaaacacaactttgcaagcacacatttcaaactgctacgttgtacacatttttgaatcatcaatctactattcttactgttgccattactctcataggggccttcaggtgaacaactctctgaattaaaacaagccaatgctccacgttcaatagccagtgaattggttgatataccaactaaaagtgtcatacagcatgatttcatgccaaattctttaagccaggcagacgtcacagttcttcaggaattacctgaggatgtgaaggctgatttgtttaatgcgcttccattgcacagatcaggagatcctacatgcagcacttcacatgtttctgaaaacaaatttccccaggatggaagaagcgatgatccaaaacaacatccacagatttgtcacctgccagggaattcccaaaaatggattgaagagttcagagttagccattgcctgatactgaatgttattgcagagcaacacacagactccatctccagtcgacctttatcttctgttttagaacctgtaatttcctaccttcccctgtgccctaactcaggcactgaagaatggaacgaagcatttgcaagcctttctgaacttctgacacaatatatacaccaaaaggttgaatctgatattgaagagctccacaaatgtttccggcttttaaaaaggtaaatcatacagctattcaagcatcattatatatgaatttactatgaaaatgattgcaaaccaggatctgcatgcttgtggaacattggcatttattattggtgatgaaaacacttttctcatttacggggcttctcccactgtagattgtcatcaggatcagagcttttcctggaattgcacgatagcattcttcctctcttacaggtaaaactttgctcgtttaatggccataagatccacctccatacgtgtaatggtcacccttcaaacacctttgctttctttaattcggtcttcacaaatgtaagatacaaattagttttagatttatgtaattgtttggtcgttttgtaggattctgtcaggcagcattatggtgggatactacatttatagtttattgttcaagtacaattagccattttgccgtcgaaagggccaagagaacctgttgagatctttgctccgatttacctcaacggtgagtcgacgcgatcttgcgatggtttgattgaatccacaaattcttactggggatggctgacaggctaaccatcatggactgttctcctgatcgtgttgtcgctaattccacttggatatggaccgagccggtttttttgttgctgcaaacctacaaagttgtcctttatacctgtaaatataactagtattattactagcactactacattgacggctctatgcaggctgcaacttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0691000, RefSeq:Os06g0691000