Os06g0692100

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Revision as of 09:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0692100| Description = Protein kinase-like domain containing protein| Version = NM_001064961.1 GI:115469653 GeneID:4341911| Length = 3270 b...")
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Gene Name

Os06g0692100

Description

Protein kinase-like domain containing protein

Version

NM_001064961.1 GI:115469653 GeneID:4341911

Length

3270 bp

Definition

Oryza sativa Japonica Group Os06g0692100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29744537..29747806

Sequence Coding Region

29744662..29746992

Expression

GEO Profiles:Os06g0692100

Genome Context

<gbrowseImage1> name=NC_008399:29744537..29747806 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29744537..29747806 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgaagctggaggagctccggctcgccaataacaacctcaccggaacgctcccgtcagcgttgagcaactggaccagcctccggttcatcgacctccggtcgaacagcttcgtcgggaacctcacggacgttgacttctccggcctccccaacctcaccgtcttcgacgtggcgtccaacaacttcaccggcacgatgccaccgagcatctactcctgcacggcgatgaaggcgctgcgcgtcagccgcaacgtcatgggcgggcaggtctcgccggagatcggcaacctgaaacagctcgaattcttctcgttgacaatcaactccttcgtcaacatcagcggcatgttctggaacctcaagggctgcacgagcctcaccgcgctgctcgtgtcctacaacttctacggcgaggcgctgccggacgccggctgggtcggcgaccacgtcaggagcgtccgcgtgattgtgatgcagaactgcgcgctgaccggcgtgatcccgtcatggctgtcgaagctgcaggacctcaacatcttgaatctctccggcaaccggctcaccggcccgatcccgagctggctcggcgccatgccgaagctgtactacgtcgacctctccgggaaccagctgtccggggtgataccgccgtcgctgatggagatgcggctactgacgtcggagcaggccatggcggaattcaatccaggacatctcatcctgatgttctctctgaatccggacaacggagcggcgaaccggcagggccgcggttactaccagctgtcaggcgtcgccgcgacgctcaatttcggcgagaacggcatcaccggcacgatctcgccggaggtcggcaagctgaagacgctgcaggtgttcgacgtcagttacaacaacctctccggcggcatcccgccggagctgaccggcctcgacagattgcaggtgctcgacttgcgctggaaccgcctgacagggacgatcccttctgcgctcaacaagctaaacttcctcgccgtcttcaacgtcgcacacaacgacctcgaggggccgatccccacgggcggccagttcgacgcgttcccgccgaagaatttcatggggaacccgaagctttgcggccgggcgatctctgtgccttgtggcaacatgatcggcgcgacgagagacgatgatccggacaagcacgtcgggaagagggtcctcatcgccatcgttcttggtgtctgcattggcctcgttgctctggtcgtcttcttgggatgcgttgtgatcaccgtcagaaaagtgatgtccaatggagctgtccgtgacggcggcaaaggcgtggaggtgtccctgttcgactccatgtcggagttgtacggcgattgctccaaagacacgatcctgttcatgtcggaggccgccggtgaggcggcgaagagattgacgttcgtggacatcttgaaggcgaccaacaacttcagccaggagagaatcatcgggtcgggcggctatggcctggtgttcctggccgagttggaggatggcgcccggctcgccgtgaagaagctcaacggcgacatgtgcctggtggagcgggagttccaggcggaggtggaggcgctgtccgcgacgcgccacgagaacctcgtcccgctcctgggcttctgcatccgcgggcgcctgcggctgctgctctacccgtacatggcgaacggcagcctccacgactggctgcacgagcggcgtgccggtggcgcgggcgcggcgccgcagctgctggactggcgcgccaggctcaacgtcgcgcgcggcgccagccgcggcgtgctctacatccacgagcagtgcaagccccagatcgtgcaccgcgacatcaagtcgagcaacatcctcctcgacgaggccggcgaggcccgcgtcgccgacttcggtctggcgcgcctcatcctccccgaccggacacacgtcacgacggagctggtcggcacgccggggtacatcccgccggagtacggccaggcgtgggtggcgacgcgtcgcggcgacgtgtacagcttcggcgtcgtgctgctggagctgctcacgggaagacgccccgtcgaggcggcctcgccgccgcacgggcagcagcgggagctcgtccggtgggtgctgcagatgcggttgcaggggagacaggccgaggtgctcgacacgcggctgagcggaggcaacgaggcgcagatgctgtacgtgctcgacctcgcatgcctctgcgtcgactcgacgccgttcagccgaccggcgatacaagaagtggttagctggctcgacaacgtcgacaccatcggcagatcatga</cdnaseq>

Protein Sequence

<aaseq>MPKLEELRLANNNLTGTLPSALSNWTSLRFIDLRSNSFVGNLTD VDFSGLPNLTVFDVASNNFTGTMPPSIYSCTAMKALRVSRNVMGGQVSPEIGNLKQLE FFSLTINSFVNISGMFWNLKGCTSLTALLVSYNFYGEALPDAGWVGDHVRSVRVIVMQ NCALTGVIPSWLSKLQDLNILNLSGNRLTGPIPSWLGAMPKLYYVDLSGNQLSGVIPP SLMEMRLLTSEQAMAEFNPGHLILMFSLNPDNGAANRQGRGYYQLSGVAATLNFGENG ITGTISPEVGKLKTLQVFDVSYNNLSGGIPPELTGLDRLQVLDLRWNRLTGTIPSALN KLNFLAVFNVAHNDLEGPIPTGGQFDAFPPKNFMGNPKLCGRAISVPCGNMIGATRDD DPDKHVGKRVLIAIVLGVCIGLVALVVFLGCVVITVRKVMSNGAVRDGGKGVEVSLFD SMSELYGDCSKDTILFMSEAAGEAAKRLTFVDILKATNNFSQERIIGSGGYGLVFLAE LEDGARLAVKKLNGDMCLVEREFQAEVEALSATRHENLVPLLGFCIRGRLRLLLYPYM ANGSLHDWLHERRAGGAGAAPQLLDWRARLNVARGASRGVLYIHEQCKPQIVHRDIKS SNILLDEAGEARVADFGLARLILPDRTHVTTELVGTPGYIPPEYGQAWVATRRGDVYS FGVVLLELLTGRRPVEAASPPHGQQRELVRWVLQMRLQGRQAEVLDTRLSGGNEAQML YVLDLACLCVDSTPFSRPAIQEVVSWLDNVDTIGRS</aaseq>

Gene Sequence

<dnaseqindica>815..3145#ctgcgccgaggcggagagggcggccttgctgtccttcctcgccgaggcctcgccgccggcgggggatgccatcgtcgccgactggcgaggatcgccggactgctgcaggtgggatggcgtggggtgcggcggcgcaggcgacggcgatggcgcggtcacgcgtctgtcgctgccgggacgcggattcaacgggacgatctcgccgtcgattggcaacctcaccgggctcacgcacctcaacctgtccggcaacagcctcgccggccagttcccagaggtgctcttctccctgcccaatgtcaccgtcgtcgacgtcagctacaactgcctctccggcgagctacctagcgtggcgacgggcgccgctgcccgcggcggcctctcgctggaggtgctcgacgtgtcgagcaacctcttggcggggcagttcccgtccgcgatctgggagcacacgccgcgcctcgtgtcgctgaatgccagcaacaacagcttccatggctcgatcccctccttgtgcgtgagctgcccggctctcgccgttcttgacctctccgtcaacgtgctcagcggggtcatctcccccgggttcggcaactgctcgcagctgcgcgttctcagcgccggccgcaacaacctcaccggcgaactccccggcgagctcttcgacgtgaagccgctccagcacctgcagctcccggcgaaccagatagaaggccggcttgatcaggatagcctcgccaagctgacgaatctggtcacgcttgatctgagctataatttgttcaccggtgaattgccggagtcgatcagcaagatgccgaagctggaggagctccggctcgccaataacaacctcaccggaacgctcccgtcagcgttgagcaactggaccagcctccggttcatcgacctccggtcgaacagcttcgtcgggaacctcacggacgttgacttctccggcctccccaacctcaccgtcttcgacgtggcgtccaacaacttcaccggcacgatgccaccgagcatctactcctgcacggcgatgaaggcgctgcgcgtcagccgcaacgtcatgggcgggcaggtctcgccggagatcggcaacctgaaacagctcgaattcttctcgttgacaatcaactccttcgtcaacatcagcggcatgttctggaacctcaagggctgcacgagcctcaccgcgctgctcgtgtcctacaacttctacggcgaggcgctgccggacgccggctgggtcggcgaccacgtcaggagcgtccgcgtgattgtgatgcagaactgcgcgctgaccggcgtgatcccgtcatggctgtcgaagctgcaggacctcaacatcttgaatctctccggcaaccggctcaccggcccgatcccgagctggctcggcgccatgccgaagctgtactacgtcgacctctccgggaaccagctgtccggggtgataccgccgtcgctgatggagatgcggctactgacgtcggagcaggccatggcggaattcaatccaggacatctcatcctgatgttctctctgaatccggacaacggagcggcgaaccggcagggccgcggttactaccagctgtcaggcgtcgccgcgacgctcaatttcggcgagaacggcatcaccggcacgatctcgccggaggtcggcaagctgaagacgctgcaggtgttcgacgtcagttacaacaacctctccggcggcatcccgccggagctgaccggcctcgacagattgcaggtgctcgacttgcgctggaaccgcctgacagggacgatcccttctgcgctcaacaagctaaacttcctcgccgtcttcaacgtcgcacacaacgacctcgaggggccgatccccacgggcggccagttcgacgcgttcccgccgaagaatttcatggggaacccgaagctttgcggccgggcgatctctgtgccttgtggcaacatgatcggcgcgacgagagacgatgatccggacaagcacgtcgggaagagggtcctcatcgccatcgttcttggtgtctgcattggcctcgttgctctggtcgtcttcttgggatgcgttgtgatcaccgtcagaaaagtgatgtccaatggagctgtccgtgacggcggcaaaggcgtggaggtgtccctgttcgactccatgtcggagttgtacggcgattgctccaaagacacgatcctgttcatgtcggaggccgccggtgaggcggcgaagagattgacgttcgtggacatcttgaaggcgaccaacaacttcagccaggagagaatcatcgggtcgggcggctatggcctggtgttcctggccgagttggaggatggcgcccggctcgccgtgaagaagctcaacggcgacatgtgcctggtggagcgggagttccaggcggaggtggaggcgctgtccgcgacgcgccacgagaacctcgtcccgctcctgggcttctgcatccgcgggcgcctgcggctgctgctctacccgtacatggcgaacggcagcctccacgactggctgcacgagcggcgtgccggtggcgcgggcgcggcgccgcagctgctggactggcgcgccaggctcaacgtcgcgcgcggcgccagccgcggcgtgctctacatccacgagcagtgcaagccccagatcgtgcaccgcgacatcaagtcgagcaacatcctcctcgacgaggccggcgaggcccgcgtcgccgacttcggtctggcgcgcctcatcctccccgaccggacacacgtcacgacggagctggtcggcacgccggggtacatcccgccggagtacggccaggcgtgggtggcgacgcgtcgcggcgacgtgtacagcttcggcgtcgtgctgctggagctgctcacgggaagacgccccgtcgaggcggcctcgccgccgcacgggcagcagcgggagctcgtccggtgggtgctgcagatgcggttgcaggggagacaggccgaggtgctcgacacgcggctgagcggaggcaacgaggcgcagatgctgtacgtgctcgacctcgcatgcctctgcgtcgactcgacgccgttcagccgaccggcgatacaagaagtggttagctggctcgacaacgtcgacaccatcggcagatcatgacatttgagcctcatttgctaacatcgatactgtgtgcgaactgagcgttctgtgatgcgaaattgggagtaatctcatgtaaattcagtcattagcagtaaccggagatggaaactaggcactgg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0692100, RefSeq:Os06g0692100