Os06g0692600

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Revision as of 09:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0692600| Description = Protein kinase-like domain containing protein| Version = NM_001064962.1 GI:115469655 GeneID:4341912| Length = 3503 b...")
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Gene Name

Os06g0692600

Description

Protein kinase-like domain containing protein

Version

NM_001064962.1 GI:115469655 GeneID:4341912

Length

3503 bp

Definition

Oryza sativa Japonica Group Os06g0692600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29775443..29778945

Sequence Coding Region

29775607..29778807

Expression

GEO Profiles:Os06g0692600

Genome Context

<gbrowseImage1> name=NC_008399:29775443..29778945 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29775443..29778945 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagtagccgggtcgtcgtcgtctcgggagttcttgtgctggttttggtcgtcgtctccgtttgtggccgggcagctgcgtgcgttgaggcggagagggaggcgttgctgtccttcctcgccgctgccgcgccgccggcaggggatggcatcgccgcccagtggcgagggtcgccggactgctgcgcgtgggacggcgtggggtgcggcgtcgacggcgcggtcacgcgtctgtggctgccgggacgcgggctcggcggcacgatctcgccgtcgatcgccaacctcaccgcgctcacgtatctcaacctgtccggcaacagcctctccggcaggttccccgacctgctgttcgcgctgcccaatgctacggttgtcgacgtcagctacaaccgtctctccggcgagctacctaacgcgccggtggcggcggcggcggcgacgaatgcccgcggcagcctctcgcttcaggtgctcgacgtgtcgagcaacctcttggcggggcggttcccgtccgcgatctgggagcacacgccgcgcctcgtgtcgctcaatgccagcaacaacagcttccatggctcgatcccgtccttgtgcgcgagctgcccggcgctcgccgttctcgacctctccgtgaacgtgcttagtggggccatctcccccgggttcagcaactgctcgtggctgcgcgttctcagcgtgggccgcaacaacctcaccggcgagctccccggcgacatcttcgacgtgaagccgctgcagcgtctgcagctaccgtccaatcagatagaaggccggcttgatccggagcgcatcgccaagctgaccaatctgatcacgcttgatcttacctacaatatgttcaccggcgaattgccggagtcgatcagccagctcacgaagctggaggagctccggcttggccataacgacttcaccggaactctcccaccggcgttgagcaactggaccagcctccgatgcctcgacctccggtcgaacagcttcgtcggggatctcacggtcgttgacttctccggcctcgccaacctcaccgtcttcgacgtggccgccaacaacttcaccggcacaatcccgccaagcatctactcctgcacggcaatgaaggcgctgcgtgtcagcaacaacctcatggtcggccagatctcgccggagatcggcaacctgaaagagctccagttcttctcactgaccgtgaactccttcgtcaacatcagcggcatgttctggaatctcaagggctgcacgagcctcaccgcgctgctcgtgtcctacaacttctacggcgaggcgctgccggacgccggctgggtcggcgaccacgtcaggagcgtccggttgatggtgatgcagaactgcgcgctgaccggcgtgatcccgtcgtggctgtcgaagctgcaggatctcaacgtcttggatctctccggcaaccggctcactggcccgatcccgagctggctcggcgccatgccgaagctgtactacgtcgacctctccgggaaccagctgtccggggtgataccgccgtcgctgatggagatgcggctgcttacatccgagcaggccatggcggaattatacccaggccatctcccgctcatgttcaccctgacgccgaacaacggagccgcgagccggcagggccgcggatacttccagatgtccggcgtcgccacgacgctcaacttcagcgacaatggcatcaccggcgcgatcccgccggagatcgtgaagctaaagacgctgcaagtgctcgacgtcagttacaacaacctctccggcggcatcccgccggagctgagcagcctcaccaggttgcagattgtgaacttgcgctggaaccgcctcacggggacgattcctcaggcgctcaaggagctcaacttcctcgccgtcttcaacgtggcgtacaacgacctcgaggggccgatcccgacgggcggccagttcgacgcgttcccgccacgggacttcacggggaacccgaagctctgtggcgaggtgatctctgttccctgcggtgacagattcgacgcgacagacaccacttcgtccaaggtcgtcgggaagaaggccctggtcgccatcgttcttggtgtctgcgttggcctggttgctctcgtcgtcttcctcggatgcgttgtcatcgccttcagaagagtggtgtccaatggagccgtccgtgatggcgggaaatgcgtggagtcgaccctgttcgactccatgtctgagatgtacggagacagctccaaggacacgatcttgttcatgtcggaggccgctggcgaggcggcgagcggagtgacgttcgtggacatccttaaggcgacgaacaacttcagcgcgggaaacatcatcggttcgggcgggtacggcctggtgttcctcgccgagctgcaggacggcacccggctcgccgtgaagaagctcaacggcgacatgtgcctggtggagcgggagttccaggcggaggtggaggcgctgtccgcgacgcgccaccagaacctcgtccctctcctgggcttctgcatccgcgggcggctgcggctgctgaactacccgtacatggcgaacggcagcctccacgactggctgcacgagcggcgagccggtgccggccgcggcgcgccgcagcgtctggactggcgcgccaggctccgcatcgcgcgcggcgtgctctacatccacgaccagtgcaagccacagatcgtgcaccgcgacatcaagtcgagcaacatcctcctcgacgaggccggcgaggcccgcgtcgccgacttcgggctggcgcgcctcatcctccccgaccggacgcacgtcacgacggagctggtcggcacgctggggtacatcccgccggagtacggccaggcgttggcggcgacgctgcgcggcgacgtgtacagcttcggcgtcgtgttgctggagctactgacagggaggcggcccgtcgaggctttgccgcacgggcagcagcgggagctcgtccggtgggtgctccagatgaggtcgcaggggaggcacggcgaggtgctcgaccagcggctgaggggcaagggcgacgaggcacagatgctgtacgtgctcgacctcgcatgcctctgcgtcgactcgacgccgttgagccggccggcgatacaggacattgttagttggctggacaacgtcgaattcatcggctga</cdnaseq>

Protein Sequence

<aaseq>MSSRVVVVSGVLVLVLVVVSVCGRAAACVEAEREALLSFLAAAA PPAGDGIAAQWRGSPDCCAWDGVGCGVDGAVTRLWLPGRGLGGTISPSIANLTALTYL NLSGNSLSGRFPDLLFALPNATVVDVSYNRLSGELPNAPVAAAAATNARGSLSLQVLD VSSNLLAGRFPSAIWEHTPRLVSLNASNNSFHGSIPSLCASCPALAVLDLSVNVLSGA ISPGFSNCSWLRVLSVGRNNLTGELPGDIFDVKPLQRLQLPSNQIEGRLDPERIAKLT NLITLDLTYNMFTGELPESISQLTKLEELRLGHNDFTGTLPPALSNWTSLRCLDLRSN SFVGDLTVVDFSGLANLTVFDVAANNFTGTIPPSIYSCTAMKALRVSNNLMVGQISPE IGNLKELQFFSLTVNSFVNISGMFWNLKGCTSLTALLVSYNFYGEALPDAGWVGDHVR SVRLMVMQNCALTGVIPSWLSKLQDLNVLDLSGNRLTGPIPSWLGAMPKLYYVDLSGN QLSGVIPPSLMEMRLLTSEQAMAELYPGHLPLMFTLTPNNGAASRQGRGYFQMSGVAT TLNFSDNGITGAIPPEIVKLKTLQVLDVSYNNLSGGIPPELSSLTRLQIVNLRWNRLT GTIPQALKELNFLAVFNVAYNDLEGPIPTGGQFDAFPPRDFTGNPKLCGEVISVPCGD RFDATDTTSSKVVGKKALVAIVLGVCVGLVALVVFLGCVVIAFRRVVSNGAVRDGGKC VESTLFDSMSEMYGDSSKDTILFMSEAAGEAASGVTFVDILKATNNFSAGNIIGSGGY GLVFLAELQDGTRLAVKKLNGDMCLVEREFQAEVEALSATRHQNLVPLLGFCIRGRLR LLNYPYMANGSLHDWLHERRAGAGRGAPQRLDWRARLRIARGVLYIHDQCKPQIVHRD IKSSNILLDEAGEARVADFGLARLILPDRTHVTTELVGTLGYIPPEYGQALAATLRGD VYSFGVVLLELLTGRRPVEALPHGQQRELVRWVLQMRSQGRHGEVLDQRLRGKGDEAQ MLYVLDLACLCVDSTPLSRPAIQDIVSWLDNVEFIG</aaseq>

Gene Sequence

<dnaseqindica>139..3339#gatttgctccctgctccatcgccattcgccaagcctagctatcagatcggtcgcggtggacttgggagcatgcgtggcaactcggcctcttcgccgccatgcacgtcgtggtgatcttgccacggcggagagccggagatgagtagccgggtcgtcgtcgtctcgggagttcttgtgctggttttggtcgtcgtctccgtttgtggccgggcagctgcgtgcgttgaggcggagagggaggcgttgctgtccttcctcgccgctgccgcgccgccggcaggggatggcatcgccgcccagtggcgagggtcgccggactgctgcgcgtgggacggcgtggggtgcggcgtcgacggcgcggtcacgcgtctgtggctgccgggacgcgggctcggcggcacgatctcgccgtcgatcgccaacctcaccgcgctcacgtatctcaacctgtccggcaacagcctctccggcaggttccccgacctgctgttcgcgctgcccaatgctacggttgtcgacgtcagctacaaccgtctctccggcgagctacctaacgcgccggtggcggcggcggcggcgacgaatgcccgcggcagcctctcgcttcaggtgctcgacgtgtcgagcaacctcttggcggggcggttcccgtccgcgatctgggagcacacgccgcgcctcgtgtcgctcaatgccagcaacaacagcttccatggctcgatcccgtccttgtgcgcgagctgcccggcgctcgccgttctcgacctctccgtgaacgtgcttagtggggccatctcccccgggttcagcaactgctcgtggctgcgcgttctcagcgtgggccgcaacaacctcaccggcgagctccccggcgacatcttcgacgtgaagccgctgcagcgtctgcagctaccgtccaatcagatagaaggccggcttgatccggagcgcatcgccaagctgaccaatctgatcacgcttgatcttacctacaatatgttcaccggcgaattgccggagtcgatcagccagctcacgaagctggaggagctccggcttggccataacgacttcaccggaactctcccaccggcgttgagcaactggaccagcctccgatgcctcgacctccggtcgaacagcttcgtcggggatctcacggtcgttgacttctccggcctcgccaacctcaccgtcttcgacgtggccgccaacaacttcaccggcacaatcccgccaagcatctactcctgcacggcaatgaaggcgctgcgtgtcagcaacaacctcatggtcggccagatctcgccggagatcggcaacctgaaagagctccagttcttctcactgaccgtgaactccttcgtcaacatcagcggcatgttctggaatctcaagggctgcacgagcctcaccgcgctgctcgtgtcctacaacttctacggcgaggcgctgccggacgccggctgggtcggcgaccacgtcaggagcgtccggttgatggtgatgcagaactgcgcgctgaccggcgtgatcccgtcgtggctgtcgaagctgcaggatctcaacgtcttggatctctccggcaaccggctcactggcccgatcccgagctggctcggcgccatgccgaagctgtactacgtcgacctctccgggaaccagctgtccggggtgataccgccgtcgctgatggagatgcggctgcttacatccgagcaggccatggcggaattatacccaggccatctcccgctcatgttcaccctgacgccgaacaacggagccgcgagccggcagggccgcggatacttccagatgtccggcgtcgccacgacgctcaacttcagcgacaatggcatcaccggcgcgatcccgccggagatcgtgaagctaaagacgctgcaagtgctcgacgtcagttacaacaacctctccggcggcatcccgccggagctgagcagcctcaccaggttgcagattgtgaacttgcgctggaaccgcctcacggggacgattcctcaggcgctcaaggagctcaacttcctcgccgtcttcaacgtggcgtacaacgacctcgaggggccgatcccgacgggcggccagttcgacgcgttcccgccacgggacttcacggggaacccgaagctctgtggcgaggtgatctctgttccctgcggtgacagattcgacgcgacagacaccacttcgtccaaggtcgtcgggaagaaggccctggtcgccatcgttcttggtgtctgcgttggcctggttgctctcgtcgtcttcctcggatgcgttgtcatcgccttcagaagagtggtgtccaatggagccgtccgtgatggcgggaaatgcgtggagtcgaccctgttcgactccatgtctgagatgtacggagacagctccaaggacacgatcttgttcatgtcggaggccgctggcgaggcggcgagcggagtgacgttcgtggacatccttaaggcgacgaacaacttcagcgcgggaaacatcatcggttcgggcgggtacggcctggtgttcctcgccgagctgcaggacggcacccggctcgccgtgaagaagctcaacggcgacatgtgcctggtggagcgggagttccaggcggaggtggaggcgctgtccgcgacgcgccaccagaacctcgtccctctcctgggcttctgcatccgcgggcggctgcggctgctgaactacccgtacatggcgaacggcagcctccacgactggctgcacgagcggcgagccggtgccggccgcggcgcgccgcagcgtctggactggcgcgccaggctccgcatcgcgcgcggcgtgctctacatccacgaccagtgcaagccacagatcgtgcaccgcgacatcaagtcgagcaacatcctcctcgacgaggccggcgaggcccgcgtcgccgacttcgggctggcgcgcctcatcctccccgaccggacgcacgtcacgacggagctggtcggcacgctggggtacatcccgccggagtacggccaggcgttggcggcgacgctgcgcggcgacgtgtacagcttcggcgtcgtgttgctggagctactgacagggaggcggcccgtcgaggctttgccgcacgggcagcagcgggagctcgtccggtgggtgctccagatgaggtcgcaggggaggcacggcgaggtgctcgaccagcggctgaggggcaagggcgacgaggcacagatgctgtacgtgctcgacctcgcatgcctctgcgtcgactcgacgccgttgagccggccggcgatacaggacattgttagttggctggacaacgtcgaattcatcggctgatcagacgtctgaatgtctgtgatctccaatggcgaacatgtcggattgttctgccaaaatggagcatttctgtatgctgagcaggtgttgaaaaatgcaaaaatgactgtaatctgaacagtggaaaattacgtatcggtggagcagtgagttgcttaacaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0692600, RefSeq:Os06g0692600