Os02g0139000

From RiceWiki
Revision as of 19:08, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0139000

Description

Similar to Phosphate starvation regulator protein (Regulatory protein of P- starvation acclimation response Psr1)

Version

NM_001052376.1 GI:115444122 GeneID:4328249

Length

3508 bp

Definition

Oryza sativa Japonica Group Os02g0139000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:2075629..2079136

Sequence Coding Region

2075881..2076165,2076450..2076519,2076628..2076691,2076798..2076837,2076930..2077006
,2077095..2077311,2077482..2078132

Expression

GEO Profiles:Os02g0139000

Genome Context

<gbrowseImage1> name=NC_008395:2075629..2079136 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:2075629..2079136 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcacacagagtgtcattgctgtaaagcaattcagtggccctgacaaaatcgcacaagcatacactgttccacagccatcagctcatgtgctctccaacgctaactatgactatgatctctgtggttcaacaaatagtacctcattatcatgtgctatccaatcctcaaacattaagaccgaatcaatcagttcatctagcctgccaaagatccttccatttagtactgactcaaatggtgaaagttcactttctcgcatgtcgcaagccgagttttcggacccaattttgtctagttcttctacattttgtacaagtctgtacacctcatcaccgatgaactctggttcatgccgaaaaaccggttatttgcctttcctgccacaacctcctaaatgtgagcagcagcagaattcagctgggcaatcatccagctctctgatgctccttgatgctgatctcagaaatagtggtcatgctgatgatgaacacacagatgacctcaaggactttcttaacctctcttcagattgtagcttccatgggaaatgcagtgccatggcttataatgagcagatggagtttcagttcttgtctgaacagctcggaattgcgatctcaaacaatgaggagagtcctcggttagatgacatatacgacagaccaccgcaacttatgtctcttccagtgtcatcttgctctgatcaggaggatctgcaggatgcaagatctcctgctaaagttcagttgagttcatctcggtcttcatctggaactgcatcatgtaacaaaccaagactgaggtggacaccggagctccacgagcgtttcgtagatgccgtgaacaagcttgaagggccagaaaaggcaactcccaagggtgttctgaagcttatgaaggtagagggcttgaccatctatcatataaagagccacttacagaagtatcggcttgcgaagtatcttccagagacaaaagaagacaagaagcaagaagaaaagaaaacaaaatcagtggctaatggaaatgatcatgcaaaaaagaagagtgctcaaatggcagaagctcttcggatgcaaatggaggtccagaaacaactccatgaacaactagaggtacaaaggcaattacagctgcgcatagaggaacacgcaagatatttgcagaagatattggaagaacaacagaaagcaagagaatccatatcctcaatgactagtacaacagaaggagaatctcctgaattcgcaccgatggagaaaaccgaggacaaagcagaaacctcttcagcacctttgtcaaagtgtagaattacagatactgatgcagaatgccattcaaaagttgataataaaaagacaaagcctcaggctgatcttgaaatggtgcatgacgaataa</cdnaseq>

Protein Sequence

<aaseq>MSTQSVIAVKQFSGPDKIAQAYTVPQPSAHVLSNANYDYDLCGS TNSTSLSCAIQSSNIKTESISSSSLPKILPFSTDSNGESSLSRMSQAEFSDPILSSSS TFCTSLYTSSPMNSGSCRKTGYLPFLPQPPKCEQQQNSAGQSSSSLMLLDADLRNSGH ADDEHTDDLKDFLNLSSDCSFHGKCSAMAYNEQMEFQFLSEQLGIAISNNEESPRLDD IYDRPPQLMSLPVSSCSDQEDLQDARSPAKVQLSSSRSSSGTASCNKPRLRWTPELHE RFVDAVNKLEGPEKATPKGVLKLMKVEGLTIYHIKSHLQKYRLAKYLPETKEDKKQEE KKTKSVANGNDHAKKKSAQMAEALRMQMEVQKQLHEQLEVQRQLQLRIEEHARYLQKI LEEQQKARESISSMTSTTEGESPEFAPMEKTEDKAETSSAPLSKCRITDTDAECHSKV DNKKTKPQADLEMVHDE</aaseq>

Gene Sequence

<dnaseqindica>2972..3256#2618..2687#2446..2509#2300..2339#2131..2207#1826..2042#1005..1655#cagaaatgactaatcatttgcaggcaggagtaatttagagagagagagagagggagcgagagaggacagtttggataggagaagagaggagagagggtgcttgctgtggaaggagaggactgacaggttcttgtttctgaatctcttcaactcatcttcttgattatcagatggagttgaatcttccatcttgtttgcattttcttacctggattcacgccttcttggcttcgttctttcttggatttgcagtcctaggttgtcttgttctcatttctcaattctcatggtgcagttgcgttttttagtttatttgtgtgcttactctggcgacagctgcctatctccttttgctctctttcagatttctgttcttcccctttctgcttttcttcccgggcatcggttggaattgtcatgattttcttttgaagtgcgcaactctttctgaggaaaagagaatgccatgaccttaattgatgtgattttacctcaaaccatacaatattttcataggtggcttgtatatgtttctatttttcttaaatttgatttgagtttggcttctgaataggaaagtttgatgtgtgctctgatgtatagacaagacttttcttgtcacttaaaggttggctgctgttagattgttgaaaggttcaaatcatttgtccatcttgttttgtccagaattttactatattcagcatattagtttaagttagcatggttttatctcttcttttgtctccaagttatctttctgatagaagccaagcccaatcgacaagattgagcttctgtacccatatttcttaacaaaatttcaatctatttatgacaaaaaaaaaacacacacattttggactacatgctctgataaggcttcaatttttcagtgctattgactggatatttacttttgtagtgcaggcttggagcaagcattccatctcagttctcatattaggtgtgaatgaccaagaaatcaacaatctcaaggagccatgagcacacagagtgtcattgctgtaaagcaattcagtggccctgacaaaatcgcacaagcatacactgttccacagccatcagctcatgtgctctccaacgctaactatgactatgatctctgtggttcaacaaatagtacctcattatcatgtgctatccaatcctcaaacattaagaccgaatcaatcagttcatctagcctgccaaagatccttccatttagtactgactcaaatggtgaaagttcactttctcgcatgtcgcaagccgagttttcggacccaattttgtctagttcttctacattttgtacaagtctgtacacctcatcaccgatgaactctggttcatgccgaaaaaccggttatttgcctttcctgccacaacctcctaaatgtgagcagcagcagaattcagctgggcaatcatccagctctctgatgctccttgatgctgatctcagaaatagtggtcatgctgatgatgaacacacagatgacctcaaggactttcttaacctctcttcagattgtagcttccatgggaaatgcagtgccatggcttataatgagcagatggagtttcagttcttgtctgaacagctcggaattgcgatctcaaacaatgaggagagtcctcggttagatgtgagttccttagcttcatcattgatatttttgtactaaattatatgtttatttatcctctaatttaatgggtatcaattactacttgcaaaaggttttttcaatgttcacttgtgaatatttatcatggcttgatttgcattttaatcacttattttcttgttccttaggacatatacgacagaccaccgcaacttatgtctcttccagtgtcatcttgctctgatcaggaggatctgcaggatgcaagatctcctgctaaagttcagttgagttcatctcggtcttcatctggaactgcatcatgtaacaaaccaagactgaggtggacaccggagctccacgagcgtttcgtagatgccgtgaacaagcttgaagggccagaaagtagggtgatcactctagttcattgagaggaatttgatcttgagaaaataaaaccatccttttatgttctatttgatacatcttgtagaggcaactcccaagggtgttctgaagcttatgaaggtagagggcttgaccatctatcatataaagagccacttacaggtgctttagtgaattttttttgatccatagtcaaattatttcatataaaatcattatttataatggttaaaacactacttgtcacaatgcagaagtatcggcttgcgaagtatcttccagagacaaaagaaggtaaggcaattaagccaaagaggaagtttaaatatcttaggaaatatgaaataattagctttgtcggtaattattaactattggttctgatgcatgctcgatctagacaagaagcaagaagaaaagaaaacaaaatcagtggctaatggaaatgatcatgcaaaaaagaagtgagcatctcccttcctttcaatgacttactgcctaacattgaacatatcctgctgtctgcatgcataaactgtaaaacttcatactgttttctgtttcttaattaggagtgctcaaatggcagaagctcttcggatgcaaatggaggtccagaaacaactccatgaacaactagaggtaagcatcagacatgtcagggcagtattttgaaggctaattaaggtgacactgtatgttcatatgtttgcagcagccctgattccagattatggttacaagacttagtatttacacagtattctttttggagcaatttacacattattttttcgggaatacgcaaaaggattgcgcacctttgtattaaggaaatttacacattattgttcatcaaagcatgcttacctgaatattatatatttagataaacttgcagtgttaacatctttcttggtcatcaggtacaaaggcaattacagctgcgcatagaggaacacgcaagatatttgcagaagatattggaagaacaacagaaagcaagagaatccatatcctcaatgactagtacaacagaaggagaatctcctgaattcgcaccgatggagaaaaccgaggacaaagcagaaacctcttcagcacctttgtcaaagtgtagaattacagatactgatgcagaatgccattcaaaagttgataataaaaagacaaagcctcaggctgatcttgaaatggtgcatgacgaataatcatggtcgcaaccttttacaatatagtgcttggacttgtatgtttgttttattctgatgtgcctccatgagttagtgcagaaattggtctttgcgattttatggtatacttttttgaagactttttttttgtatatattactaactcagatgaaaatggagccagtaaagagatggtgccattggttccctgtatactttatttcactctgtaaatctgattaccataatatgaatacttatcccaaattt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0139000, RefSeq:Os02g0139000