Os09g0519100

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Revision as of 07:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0519100| Description = Similar to BHLH transcription factor (Fragment)| Version = NM_001070228.1 GI:115480198 GeneID:4347601| Length = 855 ...")
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Gene Name

Os09g0519100

Description

Similar to BHLH transcription factor (Fragment)

Version

NM_001070228.1 GI:115480198 GeneID:4347601

Length

855 bp

Definition

Oryza sativa Japonica Group Os09g0519100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20922505..20923359

Sequence Coding Region

20922505..20923359

Expression

GEO Profiles:Os09g0519100

Genome Context

<gbrowseImage1> name=NC_008402:20922505..20923359 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20922505..20923359 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgagctgctctcgccgtgctcgtcgttctcgccgccctcgccgtcgtccatgttctccaccggcgcggcggcggcggcggcgcacgcggtgctcgagttcacgtcctgcgaggtcccggacgaatggctgatgggcgacgtggtgatggccaagaacgaggaggatgtgggcggcggcgagctgtggcccgtgttcgccgggggctcgctgtcgccggactcggagctgtccgagctgccgaggagcttcgaggcggcggcggcgcagcggccggcgaagcggcgggggaggaagcccgggccgcggccggacgggccgacggtgagccacgtggaggccgagcggcagcgccgggagaagctgaaccgccggttctgcgacctccgcgccgcggtgcctaccgtgtcccgcatggacaaggcctccctcctcgccgacgccgccgcctacatcgccgagctccgcgcccgcgtcgcccgcctcgagtccgacgcgaggcaggccgccgctgcgaggtttgagccgagctcctgcggcggcggcggcaacgcctcgtaccacggcggcggcggcggcggcggcgccgcccccgggctcgacgaggccgtggaggtgcgcaagatggggcgcgacgccgccgccgtgcgcgtcaccacgacgggcgcccgccacgcgccggcgaggctgatgggcgcgctccgctccctcgagctgccggtgcagcacgcgtgcgtcatgcgcgtccacggcgccaccaccgtccaggaggtcctcgtcgacgtccccgccgcgctccaggacggcgacgccctccgcgccgcgctgctccagcggctgcaggacagctag</cdnaseq>

Protein Sequence

<aaseq>MDELLSPCSSFSPPSPSSMFSTGAAAAAAHAVLEFTSCEVPDEW LMGDVVMAKNEEDVGGGELWPVFAGGSLSPDSELSELPRSFEAAAAQRPAKRRGRKPG PRPDGPTVSHVEAERQRREKLNRRFCDLRAAVPTVSRMDKASLLADAAAYIAELRARV ARLESDARQAAAARFEPSSCGGGGNASYHGGGGGGGAAPGLDEAVEVRKMGRDAAAVR VTTTGARHAPARLMGALRSLELPVQHACVMRVHGATTVQEVLVDVPAALQDGDALRAA LLQRLQDS</aaseq>

Gene Sequence

<dnaseqindica>1..855#atggacgagctgctctcgccgtgctcgtcgttctcgccgccctcgccgtcgtccatgttctccaccggcgcggcggcggcggcggcgcacgcggtgctcgagttcacgtcctgcgaggtcccggacgaatggctgatgggcgacgtggtgatggccaagaacgaggaggatgtgggcggcggcgagctgtggcccgtgttcgccgggggctcgctgtcgccggactcggagctgtccgagctgccgaggagcttcgaggcggcggcggcgcagcggccggcgaagcggcgggggaggaagcccgggccgcggccggacgggccgacggtgagccacgtggaggccgagcggcagcgccgggagaagctgaaccgccggttctgcgacctccgcgccgcggtgcctaccgtgtcccgcatggacaaggcctccctcctcgccgacgccgccgcctacatcgccgagctccgcgcccgcgtcgcccgcctcgagtccgacgcgaggcaggccgccgctgcgaggtttgagccgagctcctgcggcggcggcggcaacgcctcgtaccacggcggcggcggcggcggcggcgccgcccccgggctcgacgaggccgtggaggtgcgcaagatggggcgcgacgccgccgccgtgcgcgtcaccacgacgggcgcccgccacgcgccggcgaggctgatgggcgcgctccgctccctcgagctgccggtgcagcacgcgtgcgtcatgcgcgtccacggcgccaccaccgtccaggaggtcctcgtcgacgtccccgccgcgctccaggacggcgacgccctccgcgccgcgctgctccagcggctgcaggacagctag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0519100, RefSeq:Os09g0519100