Os02g0166800

From RiceWiki
Revision as of 19:09, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0166800

Description

Protein of unknown function DUF640 domain containing protein

Version

NM_001052537.1 GI:115444444 GeneID:4328416

Length

2162 bp

Definition

Oryza sativa Japonica Group Os02g0166800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3594425..3596586

Sequence Coding Region

3595373..3595884,3596122..3596185

Expression

GEO Profiles:Os02g0166800

Genome Context

<gbrowseImage1> name=NC_008395:3594425..3596586 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:3594425..3596586 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacatgatcggcatggcgtcgccggcggaaagccccggcggcggcggcacggccaggccgagcaggtacgagtcgcagaagcggcgggactggcagacgttcgggcagtatctgcgcaaccaccggccgccgctggagctctcccggtgcagcggcgcgcacgtgctggagttcctccggtacctggaccagttcgggaagacgaaggtgcacgcccatggctgccccttcttcggccacccctcgccgccggcgccgtgcccctgcccgctccgccaggcgtggggcagcctcgacgccctcgtcggccgcctccgcgccgccttcgaggagcacggcggccgccctgagtccaaccccttcggcgcccgcgccgtccgcctctacctccgcgacatccgcgacacgcagtccaaggcccgcggcatcgcctacgagaagaagcgccgcaagcgcgccgccgcctcccacaccaagcagaagcagcagcagcagcagctggtggaacaggcggcggcggccgccgaggcgcacgccgccggctgcatgatgccactgtcggtgttcaactag</cdnaseq>

Protein Sequence

<aaseq>MDMIGMASPAESPGGGGTARPSRYESQKRRDWQTFGQYLRNHRP PLELSRCSGAHVLEFLRYLDQFGKTKVHAHGCPFFGHPSPPAPCPCPLRQAWGSLDAL VGRLRAAFEEHGGRPESNPFGARAVRLYLRDIRDTQSKARGIAYEKKRRKRAAASHTK QKQQQQQLVEQAAAAAEAHAAGCMMPLSVFN</aaseq>

Gene Sequence

<dnaseqindica>949..1460#1698..1761#ctagagtgtgtttcttgtgttgatctgagtttgatttgattttcagttttgcaccatgcgatcgatcgagagtgtgttgttgttcttgttttggttcttttctagtagtatcagttgcactgattaattaattaatatagcttgtgttttgattcggtagacacggctatctgcagcgtatcaaagcttttcctgttgcacaccacacctaccatgagttcctttcaatcaatgcctaactctctctctctctcgatctgcagatcaaatatacaattcgccttctcgatcgagtagttgatgaacagtgttccccttgattgattgatcaccattattataacatcctctttctttcttctcactgtaccacacacttcgatctctgcagcctgaaccaagcaagaattatagtattagaacaactccagatatctctaaagctgatgatctagctctactttctgcatcgatcgatctcgttaattagggttagatcaccggccggcacagtgcatcttcaaataagcatcatttgctctttgagtgatacagtactatgcttccccttctgctgatctgctctctctgtccctgcatgtattacagttaatttgtgtcagttcttgcttggctgagctaagttcacgccagatcttcaaaaccccaatcttgctactgtgttttgtttttcttggaccacccagttatctgcctttttttatttttttccaaaactcacaaagctttgcacgtcaaacatattagaagaagcattgagataacttccagattagctgaaaccctagttctttctcattctgaatcatccacagtatgtcaaattctcaatagcattagctgcttggtttgaccattggtcatggggttgacgaactgacacgcagcaattaatggttcatgtttggcaggtgagagattgaggagatggacatgatcggcatggcgtcgccggcggaaagccccggcggcggcggcacggccaggccgagcaggtacgagtcgcagaagcggcgggactggcagacgttcgggcagtatctgcgcaaccaccggccgccgctggagctctcccggtgcagcggcgcgcacgtgctggagttcctccggtacctggaccagttcgggaagacgaaggtgcacgcccatggctgccccttcttcggccacccctcgccgccggcgccgtgcccctgcccgctccgccaggcgtggggcagcctcgacgccctcgtcggccgcctccgcgccgccttcgaggagcacggcggccgccctgagtccaaccccttcggcgcccgcgccgtccgcctctacctccgcgacatccgcgacacgcagtccaaggcccgcggcatcgcctacgagaagaagcgccgcaagcgcgccgccgcctcccacaccaagcagaagcagcagcagcagcagctggtggaacaggcggtggcgccgcccgccgccgccgccgccgccgcggcgctgccggacatggagacgacgacgacgacgaccacggtgccgcacttcttgttcccggcgcacttcctccacggccactacttcctggcaccggccggcgagcagcccggcggcggcgacgtcgcggcgtcgacgggcggcgctgccggtgctcccagcggcggcggcggggaggacctggtgctggccatggcggcggcggcggcggccgccgaggcgcacgccgccggctgcatgatgccactgtcggtgttcaactagctcctccatcgatctccattaatccttaagcttacgcagcttttgcaaatgcattatggcgatgggccagcctcatcgccatttgatcatatcaaattgctcgcaaatgcaaatttgcatggatgcgtggtgatttgcatttgctttgggattaattcggaggttttatatataattagctagtgcatgcacacgcacgtaatttgcatggtttttttttgtacgaaatgtttgtagtaaaattttaggttaatttagttataaactgtcactaagctagcggcaagatggtcagctgttggggcgcatgttaattatcttcatggctttgaagtgacttttaattaattaaggactggtcaacgaaatgccaatgtaaattaatcaattaaatcttatat</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0166800, RefSeq:Os02g0166800