Os06g0695800

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Revision as of 09:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0695800| Description = ABC transporter related domain containing protein| Version = NM_001064988.1 GI:115469707 GeneID:4341938| Length = 36...")
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Gene Name

Os06g0695800

Description

ABC transporter related domain containing protein

Version

NM_001064988.1 GI:115469707 GeneID:4341938

Length

3671 bp

Definition

Oryza sativa Japonica Group Os06g0695800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29949363..29953033

Sequence Coding Region

29949652..29949902,29950000..29950188,29952135..29952479,29952576..29952831

Expression

GEO Profiles:Os06g0695800

Genome Context

<gbrowseImage1> name=NC_008399:29949363..29953033 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29949363..29953033 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgtcgtctgggactttcccttcaccacgacacgagtccaagcttcgctgcccttgcttgcaaccagcggccgccaccgaatggcaccgttcacgcgtgctccaaaagccgcccacctcagttggagccgggaaaagttggcaaaaagccaataaaaaagacgatgcgcattgcccggattcccacttcgatcccccctcaccttcgtcttcctctcgacctctccgctgtctctccgatgggctcagcttcagagcatgatgtcagggagcacctgctggacgtggacggcgtcggggaagaaggggcggcggcggcggcggggccgaagatacgggtgcgggggctgacgcggcggtcggaggcgagaggcgaggagatcctgcggggcgtcgacctggacgtgccgcgcggggtggtcgtcggcgtcatcggccccagcggcagcggcaagtccacgctgctccgcgcgctcaaccgcctctgggagcccgcgccgggcgccgtgctcctcgacggcgtcgacatctgcggcatcgacgtcctcgcgctccgccggaaggtcggcatgctcttccagctccccgccatgttcgacggaaccgtggctgacaacgtgcgatacgggccacagctgcagggcaagaagctgacggacgccgaggtgcagagcctactgagcctcgccgacctggaccctgctctctgctccaagcccgcctccgagctctccgtcggccaggcgcagcgcgtcgcattggctcgcaccctcgccaacgatccggaggtgcttctgctggatgagccgacgagcgcgttggatcccatctcgacgcagaacatcgaggaggcgatcgtgcggctgaagaagacgagggggctcaccacggtgatggtgtcgcacagcgtgaagcagatccagcggatcgccgacctggtctgcctcctcgtcgccggcgaggtcgtcgaggtgctcccgccgtcggagctgtccgaggccaagcaccccatggcacggcgcttcctcgagctcagctga</cdnaseq>

Protein Sequence

<aaseq>MRRLGLSLHHDTSPSFAALACNQRPPPNGTVHACSKSRPPQLEP GKVGKKPIKKTMRIARIPTSIPPHLRLPLDLSAVSPMGSASEHDVREHLLDVDGVGEE GAAAAAGPKIRVRGLTRRSEARGEEILRGVDLDVPRGVVVGVIGPSGSGKSTLLRALN RLWEPAPGAVLLDGVDICGIDVLALRRKVGMLFQLPAMFDGTVADNVRYGPQLQGKKL TDAEVQSLLSLADLDPALCSKPASELSVGQAQRVALARTLANDPEVLLLDEPTSALDP ISTQNIEEAIVRLKKTRGLTTVMVSHSVKQIQRIADLVCLLVAGEVVEVLPPSELSEA KHPMARRFLELS</aaseq>

Gene Sequence

<dnaseqindica>3132..3382#2846..3034#555..899#203..458#accaagttgccgatgtgcttatctggtcctggtgttttctggggtaagagctagcaaccgaatcttgtatttcccacacagatccacggcaactgtcagcaacattgctgcgagtacttgatactgtatcagtgtattgcatctattgttggtgatcactgtgtagatcgacaagggtccaaaccgaccacggcgataagccatgcgtcgtctgggactttcccttcaccacgacacgagtccaagcttcgctgcccttgcttgcaaccagcggccgccaccgaatggcaccgttcacgcgtgctccaaaagccgcccacctcagttggagccgggaaaagttggcaaaaagccaataaaaaagacgatgcgcattgcccggattcccacttcgatcccccctcaccttcgtcttcctctcgacctctccgctgtctctccgatgggctcagcttcaggtgagcgagtacacctcgtcgtctcttgtgcgtcagcttcgtgttccagtgtacgtgctgacgacatgtgcgtgtgatcaacgatcgaatttgaagagcatgatgtcagggagcacctgctggacgtggacggcgtcggggaagaaggggcggcggcggcggcggggccgaagatacgggtgcgggggctgacgcggcggtcggaggcgagaggcgaggagatcctgcggggcgtcgacctggacgtgccgcgcggggtggtcgtcggcgtcatcggccccagcggcagcggcaagtccacgctgctccgcgcgctcaaccgcctctgggagcccgcgccgggcgccgtgctcctcgacggcgtcgacatctgcggcatcgacgtcctcgcgctccgccggaaggtcggcatgctcttccagctccccgccatgttcgacggtaagtacgtacgcccgccgctgtccacacacactgcacatacgcacggtgatccgatcctggaagaaactgtacatggattccatgaatgcggtaccttttccaaatttaaatgttcttctctgcaaaaagatgcttttccttcaaaaataaacaagaacttgatttgagattaccaagatcctgtccaaaaaaaaaaacagtaacgagtaagttttagacgatcaacagacaactaggtttggcatttttcatatgaataattaactattcgccactcttacgattgattagcctagttgtgtcaataataagttataataagggggaaataatgataaaatgtaccaatgtcgcagtcaaaacctaacaaatgaaagccgagttatagcatttgataaacagataaaaccaagttgagcacttttttgccctcgtcttgtttcctagaaatgggtgataagtttttttctacctaagaaaccgcatcaattttcaacttgcagtgaacttttacactagaggacgggtacttttagttgaaagagtttttacgctaaggccaaatacatgagagcttttgctagttgtaacttcttctagactttatagctcccttaaatagttcagattctaacctaaattctgataattgatactcctcagtttgccagaatatttcaacctaggatgagacgactgtgaatctgaacattcgtatttctagtatgagattaaatccatcttagtttgttacattctgagacggaggtagtagatacaaaatatttttaaaaaatactagaaactagaagttgtgaaacttaacttttccaaattcttatctactcgctactcgtcaactgattattagaggcttaaacaaggtctaaagctagtgcaatgtacttgataaaatggatgcttaatttgtctaccaacgtaagtggaatcttgcttcaaatattttttttcttagaagatgtcactgcttgctaacgtcagttgagtgggacatgcatgtcaattggtacgcctctaccaacgtggcgatgagtaacctacagtaactagaatcttccaagctcgtggctgacgtttcaatgcgacagggggacttattctaagcaaaataacagagggcgttcaatatattatctagaaaaaaaaagtaaaaaacggtcaaatttcatatgattcatgacaaaaagaagttttaaaaagtcaaatttcataagactccgtgggattgtttaggggagcttaaattctaagaagcaacaggtaaggattcggctggtgagaatatgtagaaatttggaaaaacctagcttctgctctagtttattttttcattctacaactacaactcattttaatttgaagataaaaactattttgaaaagtatttttattgtgggagaaactacaactacccgaagctccctaaggttgtgtttgaaggtgcattttggaaacacttcctctatagcacacacaacaaaatgactcattagcacctaattaattaagtattaactaaagaaattgaataataaattaaagcaattttccaaagcaacctttccatagaatttttttttacaaaaaaacatatcgtttcgcagtttaggaaacgtgcacgtaaaaaagagagtaaaaattggaacagcttaaaaattgtagttaagaacacacccttaatatgccaggttttccaaagctataattttaattttttattccaagttaaaattgattcaacagatccgatctactctggcacactccatttccccattgagtcctatttttctcatttgaggcacatggctcaagtatatatccccccagatgcaaaagctcaatgcaccaaacacagatttgacaggagtatttgatatttctcatgcaaaaaaactgaagtggtctgacacttgtgccaggaaccgtggctgacaacgtgcgatacgggccacagctgcagggcaagaagctgacggacgccgaggtgcagagcctactgagcctcgccgacctggaccctgctctctgctccaagcccgcctccgagctctccgtcggccaggcgcagcgcgtcgcattggctcgcaccctcgccaacgatccggaggcatgttggattattcagccttttcgctgattgcaacgcgacgcatcttggtgtttcggattcaggatcggattctgatgttggagtgtgtgtgcaggtgcttctgctggatgagccgacgagcgcgttggatcccatctcgacgcagaacatcgaggaggcgatcgtgcggctgaagaagacgagggggctcaccacggtgatggtgtcgcacagcgtgaagcagatccagcggatcgccgacctggtctgcctcctcgtcgccggcgaggtcgtcgaggtgctcccgccgtcggagctgtccgaggccaagcaccccatggcacggcgcttcctcgagctcagctgaagactggcacgacgatctcctcctcctctgtatgacgcttcttccgtttgtgtgattcggatgtgtacctgtaatcttgagaagttgagattatgcctgtatactatgtcggaaattttgtggtgagatgatctcaaccctactggccataaaatgcattttggtaaatattcttttatctaaaccctagtggcctccgaggctccgacattgtatttttgcctgtaatattggtacactactaaaatgaaatttggtactccctccgtcccagattataagggatttt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0695800, RefSeq:Os06g0695800